Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
ZNF408Q9H9D4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
ZNF408Q9H9D4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC31.26■■■□□ 2.59
ZNF408Q9H9D4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.26■■■□□ 2.59
ZNF408Q9H9D4 AC018358.1-201ENST00000631079 1402 ntBASIC31.24■■■□□ 2.59
ZNF408Q9H9D4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.24■■■□□ 2.59
ZNF408Q9H9D4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ZNF408Q9H9D4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.24■■■□□ 2.59
ZNF408Q9H9D4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
ZNF408Q9H9D4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ZNF408Q9H9D4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
ZNF408Q9H9D4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
ZNF408Q9H9D4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
ZNF408Q9H9D4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
ZNF408Q9H9D4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
ZNF408Q9H9D4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ZNF408Q9H9D4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.21■■■□□ 2.59
ZNF408Q9H9D4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.21■■■□□ 2.59
ZNF408Q9H9D4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.2■■■□□ 2.59
ZNF408Q9H9D4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
ZNF408Q9H9D4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ZNF408Q9H9D4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.17■■■□□ 2.58
ZNF408Q9H9D4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC31.17■■■□□ 2.58
ZNF408Q9H9D4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC31.17■■■□□ 2.58
ZNF408Q9H9D4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
ZNF408Q9H9D4 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
ZNF408Q9H9D4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
ZNF408Q9H9D4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
ZNF408Q9H9D4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
ZNF408Q9H9D4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
ZNF408Q9H9D4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
ZNF408Q9H9D4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.12■■■□□ 2.57
ZNF408Q9H9D4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
ZNF408Q9H9D4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.11■■■□□ 2.57
ZNF408Q9H9D4 LINC00273-201ENST00000539813 1452 ntBASIC31.1■■■□□ 2.57
ZNF408Q9H9D4 U85056.1-201ENST00000616429 682 ntBASIC31.1■■■□□ 2.57
ZNF408Q9H9D4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
ZNF408Q9H9D4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
ZNF408Q9H9D4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.09■■■□□ 2.57
ZNF408Q9H9D4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
ZNF408Q9H9D4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
ZNF408Q9H9D4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC31.08■■■□□ 2.57
ZNF408Q9H9D4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.07■■■□□ 2.56
ZNF408Q9H9D4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
ZNF408Q9H9D4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
ZNF408Q9H9D4 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
ZNF408Q9H9D4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.05■■■□□ 2.56
ZNF408Q9H9D4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.04■■■□□ 2.56
ZNF408Q9H9D4 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
ZNF408Q9H9D4 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.03■■■□□ 2.56
ZNF408Q9H9D4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
ZNF408Q9H9D4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.02■■■□□ 2.56
ZNF408Q9H9D4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
ZNF408Q9H9D4 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.02■■■□□ 2.56
ZNF408Q9H9D4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
ZNF408Q9H9D4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.01■■■□□ 2.55
ZNF408Q9H9D4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
ZNF408Q9H9D4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31■■■□□ 2.55
ZNF408Q9H9D4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
ZNF408Q9H9D4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ZNF408Q9H9D4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.98■■■□□ 2.55
ZNF408Q9H9D4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.98■■■□□ 2.55
ZNF408Q9H9D4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
ZNF408Q9H9D4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
ZNF408Q9H9D4 RARRES2P1-201ENST00000474487 481 ntBASIC30.97■■■□□ 2.55
ZNF408Q9H9D4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
ZNF408Q9H9D4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
ZNF408Q9H9D4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
ZNF408Q9H9D4 TSPY13P-201ENST00000338964 914 ntBASIC30.95■■■□□ 2.55
ZNF408Q9H9D4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
ZNF408Q9H9D4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
ZNF408Q9H9D4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
ZNF408Q9H9D4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
ZNF408Q9H9D4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.94■■■□□ 2.54
ZNF408Q9H9D4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
ZNF408Q9H9D4 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
ZNF408Q9H9D4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.92■■■□□ 2.54
ZNF408Q9H9D4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC30.92■■■□□ 2.54
ZNF408Q9H9D4 AC004987.1-201ENST00000428627 508 ntBASIC30.92■■■□□ 2.54
ZNF408Q9H9D4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
ZNF408Q9H9D4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
ZNF408Q9H9D4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
ZNF408Q9H9D4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
ZNF408Q9H9D4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
ZNF408Q9H9D4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
ZNF408Q9H9D4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
ZNF408Q9H9D4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.89■■■□□ 2.54
ZNF408Q9H9D4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
ZNF408Q9H9D4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
ZNF408Q9H9D4 ATP5G2P3-201ENST00000429083 425 ntBASIC30.88■■■□□ 2.53
ZNF408Q9H9D4 KRT18P60-201ENST00000312876 1297 ntBASIC30.87■■■□□ 2.53
ZNF408Q9H9D4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC30.87■■■□□ 2.53
ZNF408Q9H9D4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC30.87■■■□□ 2.53
ZNF408Q9H9D4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.87■■■□□ 2.53
ZNF408Q9H9D4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC30.86■■■□□ 2.53
ZNF408Q9H9D4 AC120057.4-201ENST00000624722 1615 ntBASIC30.86■■■□□ 2.53
ZNF408Q9H9D4 AC060814.1-201ENST00000554326 538 ntBASIC30.85■■■□□ 2.53
ZNF408Q9H9D4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
ZNF408Q9H9D4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC30.84■■■□□ 2.53
ZNF408Q9H9D4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC30.84■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms