Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC127502.1-201ENST00000399971 1502 ntBASIC8.89□□□□□ -0.99
KRTAP4-3Q9BYR4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
KRTAP4-3Q9BYR4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
KRTAP4-3Q9BYR4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC8.89□□□□□ -0.99
KRTAP4-3Q9BYR4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-3Q9BYR4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-3Q9BYR4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-3Q9BYR4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC8.88□□□□□ -0.99
KRTAP4-3Q9BYR4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-3Q9BYR4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
KRTAP4-3Q9BYR4 LINC01971-201ENST00000617888 1048 ntBASIC8.88□□□□□ -0.99
KRTAP4-3Q9BYR4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-3Q9BYR4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC8.88□□□□□ -0.99
KRTAP4-3Q9BYR4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP4-3Q9BYR4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-3Q9BYR4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-3Q9BYR4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC8.87□□□□□ -0.99
KRTAP4-3Q9BYR4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-3Q9BYR4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC8.87□□□□□ -0.99
KRTAP4-3Q9BYR4 MIR639-201ENST00000384974 98 ntBASIC8.87□□□□□ -0.99
KRTAP4-3Q9BYR4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC8.87□□□□□ -0.99
KRTAP4-3Q9BYR4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC8.87□□□□□ -0.99
KRTAP4-3Q9BYR4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC8.87□□□□□ -0.99
KRTAP4-3Q9BYR4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-3Q9BYR4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
KRTAP4-3Q9BYR4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP4-3Q9BYR4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
KRTAP4-3Q9BYR4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
KRTAP4-3Q9BYR4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
KRTAP4-3Q9BYR4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
KRTAP4-3Q9BYR4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC8.86□□□□□ -0.99
KRTAP4-3Q9BYR4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
KRTAP4-3Q9BYR4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC8.86□□□□□ -0.99
KRTAP4-3Q9BYR4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC8.86□□□□□ -0.99
KRTAP4-3Q9BYR4 MIR4449-201ENST00000578365 66 ntBASIC8.86□□□□□ -0.99
KRTAP4-3Q9BYR4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
KRTAP4-3Q9BYR4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC8.86□□□□□ -0.99
KRTAP4-3Q9BYR4 ABCB10P1-201ENST00000614297 2181 ntBASIC8.86□□□□□ -0.99
KRTAP4-3Q9BYR4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
KRTAP4-3Q9BYR4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
KRTAP4-3Q9BYR4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
KRTAP4-3Q9BYR4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
KRTAP4-3Q9BYR4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC8.85□□□□□ -0.99
KRTAP4-3Q9BYR4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
KRTAP4-3Q9BYR4 CHML-204ENST00000638121 920 ntTSL 2 BASIC8.85□□□□□ -0.99
KRTAP4-3Q9BYR4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
KRTAP4-3Q9BYR4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
KRTAP4-3Q9BYR4 WHAMMP2-203ENST00000563942 1603 ntBASIC8.84□□□□□ -0.99
KRTAP4-3Q9BYR4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
KRTAP4-3Q9BYR4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
KRTAP4-3Q9BYR4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
KRTAP4-3Q9BYR4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC8.84□□□□□ -0.99
KRTAP4-3Q9BYR4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
KRTAP4-3Q9BYR4 DUX4L13-201ENST00000554103 1267 ntBASIC8.84□□□□□ -0.99
KRTAP4-3Q9BYR4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC8.84□□□□□ -0.99
KRTAP4-3Q9BYR4 DUX4L15-201ENST00000611059 1267 ntBASIC8.84□□□□□ -0.99
KRTAP4-3Q9BYR4 DUX4L23-201ENST00000615195 1269 ntBASIC8.84□□□□□ -0.99
KRTAP4-3Q9BYR4 DUX4L24-201ENST00000617576 1269 ntBASIC8.84□□□□□ -0.99
KRTAP4-3Q9BYR4 DUX4L22-201ENST00000618238 1269 ntBASIC8.84□□□□□ -0.99
KRTAP4-3Q9BYR4 DUX4L20-201ENST00000619712 1269 ntBASIC8.84□□□□□ -0.99
KRTAP4-3Q9BYR4 DUX4L21-201ENST00000622058 1269 ntBASIC8.84□□□□□ -0.99
KRTAP4-3Q9BYR4 DUX4L10-201ENST00000622460 1267 ntBASIC8.84□□□□□ -0.99
KRTAP4-3Q9BYR4 DUX4L25-201ENST00000624915 1269 ntBASIC8.84□□□□□ -0.99
KRTAP4-3Q9BYR4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
KRTAP4-3Q9BYR4 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
KRTAP4-3Q9BYR4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC8.83□□□□□ -1
KRTAP4-3Q9BYR4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
KRTAP4-3Q9BYR4 ST7-AS1-201ENST00000456775 1889 ntBASIC8.83□□□□□ -1
KRTAP4-3Q9BYR4 HES6-205ENST00000409356 528 ntTSL 2 BASIC8.83□□□□□ -1
KRTAP4-3Q9BYR4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC8.83□□□□□ -1
KRTAP4-3Q9BYR4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-3Q9BYR4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC8.83□□□□□ -1
KRTAP4-3Q9BYR4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-3Q9BYR4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-3Q9BYR4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-3Q9BYR4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC8.83□□□□□ -1
KRTAP4-3Q9BYR4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-3Q9BYR4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-3Q9BYR4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC8.82□□□□□ -1
KRTAP4-3Q9BYR4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC8.82□□□□□ -1
KRTAP4-3Q9BYR4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-3Q9BYR4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-3Q9BYR4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-3Q9BYR4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC8.82□□□□□ -1
KRTAP4-3Q9BYR4 LINC00273-201ENST00000539813 1452 ntBASIC8.82□□□□□ -1
KRTAP4-3Q9BYR4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-3Q9BYR4 ST7-202ENST00000323984 2142 ntTSL 5 BASIC8.81□□□□□ -1
KRTAP4-3Q9BYR4 ST7-207ENST00000393449 2127 ntTSL 5 BASIC8.81□□□□□ -1
KRTAP4-3Q9BYR4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-3Q9BYR4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
KRTAP4-3Q9BYR4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
KRTAP4-3Q9BYR4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC8.81□□□□□ -1
KRTAP4-3Q9BYR4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC8.81□□□□□ -1
KRTAP4-3Q9BYR4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC8.81□□□□□ -1
KRTAP4-3Q9BYR4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC8.81□□□□□ -1
KRTAP4-3Q9BYR4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
KRTAP4-3Q9BYR4 AC139426.1-201ENST00000568218 2529 ntBASIC8.81□□□□□ -1
KRTAP4-3Q9BYR4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-3Q9BYR4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
KRTAP4-3Q9BYR4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms