Protein–RNA interactions for Protein: Q9BRT8

CBWD1, COBW domain-containing protein 1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1Q9BRT8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CBWD1Q9BRT8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CBWD1Q9BRT8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.47■■■□□ 2.15
CBWD1Q9BRT8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CBWD1Q9BRT8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.47■■■□□ 2.15
CBWD1Q9BRT8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.14
CBWD1Q9BRT8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.45■■■□□ 2.14
CBWD1Q9BRT8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.45■■■□□ 2.14
CBWD1Q9BRT8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.44■■■□□ 2.14
CBWD1Q9BRT8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CBWD1Q9BRT8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
CBWD1Q9BRT8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CBWD1Q9BRT8 AL139393.2-201ENST00000608721 2025 ntBASIC28.42■■■□□ 2.14
CBWD1Q9BRT8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
CBWD1Q9BRT8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.41■■■□□ 2.14
CBWD1Q9BRT8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
CBWD1Q9BRT8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
CBWD1Q9BRT8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CBWD1Q9BRT8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CBWD1Q9BRT8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
CBWD1Q9BRT8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CBWD1Q9BRT8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
CBWD1Q9BRT8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.37■■■□□ 2.13
CBWD1Q9BRT8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.36■■■□□ 2.13
CBWD1Q9BRT8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CBWD1Q9BRT8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CBWD1Q9BRT8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.35■■■□□ 2.13
CBWD1Q9BRT8 AC021231.2-201ENST00000594613 730 ntBASIC28.35■■■□□ 2.13
CBWD1Q9BRT8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.35■■■□□ 2.13
CBWD1Q9BRT8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.34■■■□□ 2.13
CBWD1Q9BRT8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
CBWD1Q9BRT8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
CBWD1Q9BRT8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CBWD1Q9BRT8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CBWD1Q9BRT8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CBWD1Q9BRT8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CBWD1Q9BRT8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
CBWD1Q9BRT8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CBWD1Q9BRT8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CBWD1Q9BRT8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CBWD1Q9BRT8 DUX4L29-201ENST00000425409 679 ntBASIC28.3■■■□□ 2.12
CBWD1Q9BRT8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CBWD1Q9BRT8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CBWD1Q9BRT8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CBWD1Q9BRT8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.29■■■□□ 2.12
CBWD1Q9BRT8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CBWD1Q9BRT8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.28■■■□□ 2.12
CBWD1Q9BRT8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.28■■■□□ 2.12
CBWD1Q9BRT8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.28■■■□□ 2.12
CBWD1Q9BRT8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.27■■■□□ 2.12
CBWD1Q9BRT8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CBWD1Q9BRT8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
CBWD1Q9BRT8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.27■■■□□ 2.12
CBWD1Q9BRT8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
CBWD1Q9BRT8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.27■■■□□ 2.12
CBWD1Q9BRT8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.27■■■□□ 2.12
CBWD1Q9BRT8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
CBWD1Q9BRT8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.27■■■□□ 2.12
CBWD1Q9BRT8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.27■■■□□ 2.12
CBWD1Q9BRT8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
CBWD1Q9BRT8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CBWD1Q9BRT8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CBWD1Q9BRT8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CBWD1Q9BRT8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CBWD1Q9BRT8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
CBWD1Q9BRT8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
CBWD1Q9BRT8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
CBWD1Q9BRT8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CBWD1Q9BRT8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
CBWD1Q9BRT8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.24■■■□□ 2.11
CBWD1Q9BRT8 LINC00273-201ENST00000539813 1452 ntBASIC28.24■■■□□ 2.11
CBWD1Q9BRT8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.24■■■□□ 2.11
CBWD1Q9BRT8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.24■■■□□ 2.11
CBWD1Q9BRT8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CBWD1Q9BRT8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CBWD1Q9BRT8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CBWD1Q9BRT8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CBWD1Q9BRT8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.23■■■□□ 2.11
CBWD1Q9BRT8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
CBWD1Q9BRT8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.22■■■□□ 2.11
CBWD1Q9BRT8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.22■■■□□ 2.11
CBWD1Q9BRT8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.22■■■□□ 2.11
CBWD1Q9BRT8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CBWD1Q9BRT8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.21■■■□□ 2.11
CBWD1Q9BRT8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CBWD1Q9BRT8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.2■■■□□ 2.1
CBWD1Q9BRT8 AC135983.2-203ENST00000454486 1613 ntBASIC28.2■■■□□ 2.1
CBWD1Q9BRT8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CBWD1Q9BRT8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CBWD1Q9BRT8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CBWD1Q9BRT8 AP004833.2-201ENST00000532228 1454 ntBASIC28.19■■■□□ 2.1
CBWD1Q9BRT8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.18■■■□□ 2.1
CBWD1Q9BRT8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
CBWD1Q9BRT8 WHAMMP2-203ENST00000563942 1603 ntBASIC28.18■■■□□ 2.1
CBWD1Q9BRT8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
CBWD1Q9BRT8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.18■■■□□ 2.1
CBWD1Q9BRT8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.17■■■□□ 2.1
CBWD1Q9BRT8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.17■■■□□ 2.1
CBWD1Q9BRT8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.17■■■□□ 2.1
CBWD1Q9BRT8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.17■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms