Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.57■■□□□ 1.52
EXD3Q8N9H8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
EXD3Q8N9H8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
EXD3Q8N9H8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
EXD3Q8N9H8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
EXD3Q8N9H8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
EXD3Q8N9H8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
EXD3Q8N9H8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.55■■□□□ 1.52
EXD3Q8N9H8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
EXD3Q8N9H8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
EXD3Q8N9H8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.54■■□□□ 1.52
EXD3Q8N9H8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
EXD3Q8N9H8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
EXD3Q8N9H8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
EXD3Q8N9H8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.54■■□□□ 1.52
EXD3Q8N9H8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
EXD3Q8N9H8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.53■■□□□ 1.52
EXD3Q8N9H8 GPX1-201ENST00000419349 1106 ntBASIC24.53■■□□□ 1.52
EXD3Q8N9H8 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.53■■□□□ 1.52
EXD3Q8N9H8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
EXD3Q8N9H8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
EXD3Q8N9H8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
EXD3Q8N9H8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
EXD3Q8N9H8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
EXD3Q8N9H8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
EXD3Q8N9H8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
EXD3Q8N9H8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
EXD3Q8N9H8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
EXD3Q8N9H8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
EXD3Q8N9H8 RNF126P1-201ENST00000567452 1320 ntBASIC24.49■■□□□ 1.51
EXD3Q8N9H8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
EXD3Q8N9H8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
EXD3Q8N9H8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
EXD3Q8N9H8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
EXD3Q8N9H8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
EXD3Q8N9H8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
EXD3Q8N9H8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
EXD3Q8N9H8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.46■■□□□ 1.51
EXD3Q8N9H8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
EXD3Q8N9H8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
EXD3Q8N9H8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.45■■□□□ 1.5
EXD3Q8N9H8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
EXD3Q8N9H8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
EXD3Q8N9H8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
EXD3Q8N9H8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
EXD3Q8N9H8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
EXD3Q8N9H8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.41■■□□□ 1.5
EXD3Q8N9H8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
EXD3Q8N9H8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
EXD3Q8N9H8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.41■■□□□ 1.5
EXD3Q8N9H8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
EXD3Q8N9H8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
EXD3Q8N9H8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.4■■□□□ 1.5
EXD3Q8N9H8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
EXD3Q8N9H8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
EXD3Q8N9H8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
EXD3Q8N9H8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
EXD3Q8N9H8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.37■■□□□ 1.49
EXD3Q8N9H8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
EXD3Q8N9H8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
EXD3Q8N9H8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
EXD3Q8N9H8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
EXD3Q8N9H8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
EXD3Q8N9H8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.36■■□□□ 1.49
EXD3Q8N9H8 NTF6A-201ENST00000591175 560 ntBASIC24.36■■□□□ 1.49
EXD3Q8N9H8 AC012354.3-201ENST00000623734 483 ntBASIC24.36■■□□□ 1.49
EXD3Q8N9H8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
EXD3Q8N9H8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
EXD3Q8N9H8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.35■■□□□ 1.49
EXD3Q8N9H8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
EXD3Q8N9H8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.34■■□□□ 1.49
EXD3Q8N9H8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.34■■□□□ 1.49
EXD3Q8N9H8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
EXD3Q8N9H8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
EXD3Q8N9H8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.33■■□□□ 1.49
EXD3Q8N9H8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
EXD3Q8N9H8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.33■■□□□ 1.49
EXD3Q8N9H8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.32■■□□□ 1.48
EXD3Q8N9H8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.32■■□□□ 1.48
EXD3Q8N9H8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.31■■□□□ 1.48
EXD3Q8N9H8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
EXD3Q8N9H8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
EXD3Q8N9H8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
EXD3Q8N9H8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
EXD3Q8N9H8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
EXD3Q8N9H8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
EXD3Q8N9H8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
EXD3Q8N9H8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.29■■□□□ 1.48
EXD3Q8N9H8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
EXD3Q8N9H8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
EXD3Q8N9H8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
EXD3Q8N9H8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
EXD3Q8N9H8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.26■■□□□ 1.47
EXD3Q8N9H8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
EXD3Q8N9H8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
EXD3Q8N9H8 AC022413.1-201ENST00000624602 984 ntBASIC24.24■■□□□ 1.47
EXD3Q8N9H8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.24■■□□□ 1.47
EXD3Q8N9H8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
EXD3Q8N9H8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
EXD3Q8N9H8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 267.2 ms