Protein–RNA interactions for Protein: Q8N3U4

STAG2, Cohesin subunit SA-2, humanhuman

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG2Q8N3U4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
STAG2Q8N3U4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.28■■■□□ 2.44
STAG2Q8N3U4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.28■■■□□ 2.44
STAG2Q8N3U4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
STAG2Q8N3U4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
STAG2Q8N3U4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
STAG2Q8N3U4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
STAG2Q8N3U4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
STAG2Q8N3U4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.26■■■□□ 2.43
STAG2Q8N3U4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.26■■■□□ 2.43
STAG2Q8N3U4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
STAG2Q8N3U4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.25■■■□□ 2.43
STAG2Q8N3U4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
STAG2Q8N3U4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
STAG2Q8N3U4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
STAG2Q8N3U4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
STAG2Q8N3U4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.23■■■□□ 2.43
STAG2Q8N3U4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.23■■■□□ 2.43
STAG2Q8N3U4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.22■■■□□ 2.43
STAG2Q8N3U4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.22■■■□□ 2.43
STAG2Q8N3U4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
STAG2Q8N3U4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
STAG2Q8N3U4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
STAG2Q8N3U4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
STAG2Q8N3U4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
STAG2Q8N3U4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
STAG2Q8N3U4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.21■■■□□ 2.43
STAG2Q8N3U4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
STAG2Q8N3U4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.2■■■□□ 2.43
STAG2Q8N3U4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.2■■■□□ 2.43
STAG2Q8N3U4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
STAG2Q8N3U4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.19■■■□□ 2.42
STAG2Q8N3U4 LINC00273-201ENST00000539813 1452 ntBASIC30.19■■■□□ 2.42
STAG2Q8N3U4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
STAG2Q8N3U4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
STAG2Q8N3U4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
STAG2Q8N3U4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
STAG2Q8N3U4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
STAG2Q8N3U4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.15■■■□□ 2.42
STAG2Q8N3U4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.15■■■□□ 2.42
STAG2Q8N3U4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
STAG2Q8N3U4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.42
STAG2Q8N3U4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
STAG2Q8N3U4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
STAG2Q8N3U4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.13■■■□□ 2.41
STAG2Q8N3U4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
STAG2Q8N3U4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
STAG2Q8N3U4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
STAG2Q8N3U4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.12■■■□□ 2.41
STAG2Q8N3U4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
STAG2Q8N3U4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
STAG2Q8N3U4 LINC01971-201ENST00000617888 1048 ntBASIC30.12■■■□□ 2.41
STAG2Q8N3U4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
STAG2Q8N3U4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
STAG2Q8N3U4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
STAG2Q8N3U4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
STAG2Q8N3U4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
STAG2Q8N3U4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
STAG2Q8N3U4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
STAG2Q8N3U4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
STAG2Q8N3U4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
STAG2Q8N3U4 AC135983.2-203ENST00000454486 1613 ntBASIC30.08■■■□□ 2.41
STAG2Q8N3U4 DUX4L11-201ENST00000611504 1267 ntBASIC30.08■■■□□ 2.41
STAG2Q8N3U4 DUX4L12-201ENST00000614593 1267 ntBASIC30.08■■■□□ 2.41
STAG2Q8N3U4 DUX4L14-201ENST00000621227 1267 ntBASIC30.08■■■□□ 2.41
STAG2Q8N3U4 WHAMMP2-203ENST00000563942 1603 ntBASIC30.07■■■□□ 2.4
STAG2Q8N3U4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
STAG2Q8N3U4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
STAG2Q8N3U4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
STAG2Q8N3U4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
STAG2Q8N3U4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
STAG2Q8N3U4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.05■■■□□ 2.4
STAG2Q8N3U4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
STAG2Q8N3U4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.03■■■□□ 2.4
STAG2Q8N3U4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.03■■■□□ 2.4
STAG2Q8N3U4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
STAG2Q8N3U4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
STAG2Q8N3U4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.01■■■□□ 2.39
STAG2Q8N3U4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.01■■■□□ 2.39
STAG2Q8N3U4 AL139393.2-201ENST00000608721 2025 ntBASIC30.01■■■□□ 2.39
STAG2Q8N3U4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30■■■□□ 2.39
STAG2Q8N3U4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30■■■□□ 2.39
STAG2Q8N3U4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
STAG2Q8N3U4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
STAG2Q8N3U4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
STAG2Q8N3U4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.99■■■□□ 2.39
STAG2Q8N3U4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.99■■■□□ 2.39
STAG2Q8N3U4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC29.98■■■□□ 2.39
STAG2Q8N3U4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
STAG2Q8N3U4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.97■■■□□ 2.39
STAG2Q8N3U4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
STAG2Q8N3U4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.96■■■□□ 2.39
STAG2Q8N3U4 CR559946.2-201ENST00000623684 991 ntBASIC29.96■■■□□ 2.39
STAG2Q8N3U4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.95■■■□□ 2.39
STAG2Q8N3U4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.95■■■□□ 2.39
STAG2Q8N3U4 DUX4L13-201ENST00000554103 1267 ntBASIC29.95■■■□□ 2.39
STAG2Q8N3U4 MIR3648-2-201ENST00000581792 180 ntBASIC29.95■■■□□ 2.39
STAG2Q8N3U4 DUX4L15-201ENST00000611059 1267 ntBASIC29.95■■■□□ 2.39
STAG2Q8N3U4 DUX4L23-201ENST00000615195 1269 ntBASIC29.95■■■□□ 2.39
STAG2Q8N3U4 MIR3648-1-201ENST00000615959 180 ntBASIC29.95■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms