Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC39.59■■■■□ 3.93
ABCA6Q8N139 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC39.59■■■■□ 3.93
ABCA6Q8N139 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC39.58■■■■□ 3.93
ABCA6Q8N139 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC39.58■■■■□ 3.93
ABCA6Q8N139 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC39.57■■■■□ 3.93
ABCA6Q8N139 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC39.57■■■■□ 3.93
ABCA6Q8N139 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC39.57■■■■□ 3.93
ABCA6Q8N139 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC39.57■■■■□ 3.92
ABCA6Q8N139 CEP120-209ENST00000515110 606 ntTSL 3 BASIC39.56■■■■□ 3.92
ABCA6Q8N139 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC39.56■■■■□ 3.92
ABCA6Q8N139 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC39.56■■■■□ 3.92
ABCA6Q8N139 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC39.55■■■■□ 3.92
ABCA6Q8N139 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC39.55■■■■□ 3.92
ABCA6Q8N139 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC39.54■■■■□ 3.92
ABCA6Q8N139 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
ABCA6Q8N139 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC39.53■■■■□ 3.92
ABCA6Q8N139 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC39.53■■■■□ 3.92
ABCA6Q8N139 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC39.52■■■■□ 3.92
ABCA6Q8N139 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC39.52■■■■□ 3.92
ABCA6Q8N139 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC39.51■■■■□ 3.92
ABCA6Q8N139 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC39.51■■■■□ 3.91
ABCA6Q8N139 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC39.5■■■■□ 3.91
ABCA6Q8N139 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC39.5■■■■□ 3.91
ABCA6Q8N139 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC39.48■■■■□ 3.91
ABCA6Q8N139 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC39.48■■■■□ 3.91
ABCA6Q8N139 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC39.47■■■■□ 3.91
ABCA6Q8N139 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC39.47■■■■□ 3.91
ABCA6Q8N139 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC39.47■■■■□ 3.91
ABCA6Q8N139 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC39.46■■■■□ 3.91
ABCA6Q8N139 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC39.45■■■■□ 3.91
ABCA6Q8N139 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC39.45■■■■□ 3.91
ABCA6Q8N139 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91
ABCA6Q8N139 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91
ABCA6Q8N139 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC39.45■■■■□ 3.91
ABCA6Q8N139 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC39.44■■■■□ 3.9
ABCA6Q8N139 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
ABCA6Q8N139 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
ABCA6Q8N139 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC39.43■■■■□ 3.9
ABCA6Q8N139 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC39.42■■■■□ 3.9
ABCA6Q8N139 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC39.41■■■■□ 3.9
ABCA6Q8N139 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
ABCA6Q8N139 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
ABCA6Q8N139 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC39.4■■■■□ 3.9
ABCA6Q8N139 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC39.4■■■■□ 3.9
ABCA6Q8N139 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC39.39■■■■□ 3.9
ABCA6Q8N139 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC39.39■■■■□ 3.9
ABCA6Q8N139 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC39.36■■■■□ 3.89
ABCA6Q8N139 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC39.36■■■■□ 3.89
ABCA6Q8N139 AC022413.1-201ENST00000624602 984 ntBASIC39.36■■■■□ 3.89
ABCA6Q8N139 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC39.35■■■■□ 3.89
ABCA6Q8N139 AC008813.1-201ENST00000536597 885 ntBASIC39.35■■■■□ 3.89
ABCA6Q8N139 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC39.35■■■■□ 3.89
ABCA6Q8N139 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC39.34■■■■□ 3.89
ABCA6Q8N139 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC39.33■■■■□ 3.89
ABCA6Q8N139 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC39.32■■■■□ 3.89
ABCA6Q8N139 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC39.31■■■■□ 3.88
ABCA6Q8N139 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC39.31■■■■□ 3.88
ABCA6Q8N139 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC39.31■■■■□ 3.88
ABCA6Q8N139 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC39.3■■■■□ 3.88
ABCA6Q8N139 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC39.29■■■■□ 3.88
ABCA6Q8N139 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC39.29■■■■□ 3.88
ABCA6Q8N139 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC39.29■■■■□ 3.88
ABCA6Q8N139 GFER-205ENST00000569451 517 ntTSL 5 BASIC39.29■■■■□ 3.88
ABCA6Q8N139 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC39.28■■■■□ 3.88
ABCA6Q8N139 AC018358.1-201ENST00000631079 1402 ntBASIC39.28■■■■□ 3.88
ABCA6Q8N139 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC39.28■■■■□ 3.88
ABCA6Q8N139 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC39.27■■■■□ 3.88
ABCA6Q8N139 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
ABCA6Q8N139 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC39.26■■■■□ 3.88
ABCA6Q8N139 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
ABCA6Q8N139 AL033527.3-201ENST00000566366 1196 ntBASIC39.25■■■■□ 3.87
ABCA6Q8N139 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC39.25■■■■□ 3.87
ABCA6Q8N139 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC39.25■■■■□ 3.87
ABCA6Q8N139 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC39.24■■■■□ 3.87
ABCA6Q8N139 AC010864.1-201ENST00000609407 1511 ntBASIC39.24■■■■□ 3.87
ABCA6Q8N139 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
ABCA6Q8N139 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
ABCA6Q8N139 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC39.23■■■■□ 3.87
ABCA6Q8N139 AC060814.1-201ENST00000554326 538 ntBASIC39.23■■■■□ 3.87
ABCA6Q8N139 HES4-202ENST00000428771 1040 ntTSL 2 BASIC39.21■■■■□ 3.87
ABCA6Q8N139 U85056.1-201ENST00000616429 682 ntBASIC39.21■■■■□ 3.87
ABCA6Q8N139 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC39.2■■■■□ 3.87
ABCA6Q8N139 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC39.2■■■■□ 3.87
ABCA6Q8N139 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC39.2■■■■□ 3.87
ABCA6Q8N139 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.86
ABCA6Q8N139 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC39.19■■■■□ 3.86
ABCA6Q8N139 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC39.18■■■■□ 3.86
ABCA6Q8N139 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC39.18■■■■□ 3.86
ABCA6Q8N139 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC39.18■■■■□ 3.86
ABCA6Q8N139 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC39.18■■■■□ 3.86
ABCA6Q8N139 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC39.17■■■■□ 3.86
ABCA6Q8N139 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC39.16■■■■□ 3.86
ABCA6Q8N139 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC39.16■■■■□ 3.86
ABCA6Q8N139 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC39.16■■■■□ 3.86
ABCA6Q8N139 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC39.16■■■■□ 3.86
ABCA6Q8N139 HYI-213ENST00000583037 1322 ntTSL 5 BASIC39.15■■■■□ 3.86
ABCA6Q8N139 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC39.15■■■■□ 3.86
ABCA6Q8N139 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC39.15■■■■□ 3.86
ABCA6Q8N139 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC39.15■■■■□ 3.86
ABCA6Q8N139 AL161658.1-201ENST00000623641 1967 ntBASIC39.15■■■■□ 3.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms