Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
COL23A1Q86Y22 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
COL23A1Q86Y22 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
COL23A1Q86Y22 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
COL23A1Q86Y22 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC33.52■■■□□ 2.96
COL23A1Q86Y22 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
COL23A1Q86Y22 AC008813.1-201ENST00000536597 885 ntBASIC33.52■■■□□ 2.96
COL23A1Q86Y22 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
COL23A1Q86Y22 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
COL23A1Q86Y22 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
COL23A1Q86Y22 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
COL23A1Q86Y22 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC33.51■■■□□ 2.95
COL23A1Q86Y22 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC33.5■■■□□ 2.95
COL23A1Q86Y22 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC33.5■■■□□ 2.95
COL23A1Q86Y22 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC33.5■■■□□ 2.95
COL23A1Q86Y22 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC33.49■■■□□ 2.95
COL23A1Q86Y22 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
COL23A1Q86Y22 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC33.49■■■□□ 2.95
COL23A1Q86Y22 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
COL23A1Q86Y22 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC33.49■■■□□ 2.95
COL23A1Q86Y22 AC018358.1-201ENST00000631079 1402 ntBASIC33.49■■■□□ 2.95
COL23A1Q86Y22 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
COL23A1Q86Y22 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC33.48■■■□□ 2.95
COL23A1Q86Y22 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
COL23A1Q86Y22 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC33.47■■■□□ 2.95
COL23A1Q86Y22 LINC00273-201ENST00000539813 1452 ntBASIC33.47■■■□□ 2.95
COL23A1Q86Y22 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC33.45■■■□□ 2.94
COL23A1Q86Y22 HES4-202ENST00000428771 1040 ntTSL 2 BASIC33.44■■■□□ 2.94
COL23A1Q86Y22 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC33.44■■■□□ 2.94
COL23A1Q86Y22 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC33.43■■■□□ 2.94
COL23A1Q86Y22 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
COL23A1Q86Y22 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
COL23A1Q86Y22 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC33.4■■■□□ 2.94
COL23A1Q86Y22 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC33.4■■■□□ 2.94
COL23A1Q86Y22 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC33.4■■■□□ 2.94
COL23A1Q86Y22 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC33.39■■■□□ 2.94
COL23A1Q86Y22 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC33.39■■■□□ 2.94
COL23A1Q86Y22 U85056.1-201ENST00000616429 682 ntBASIC33.39■■■□□ 2.94
COL23A1Q86Y22 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
COL23A1Q86Y22 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC33.37■■■□□ 2.93
COL23A1Q86Y22 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC33.37■■■□□ 2.93
COL23A1Q86Y22 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC33.37■■■□□ 2.93
COL23A1Q86Y22 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
COL23A1Q86Y22 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
COL23A1Q86Y22 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC33.36■■■□□ 2.93
COL23A1Q86Y22 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC33.35■■■□□ 2.93
COL23A1Q86Y22 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC33.35■■■□□ 2.93
COL23A1Q86Y22 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
COL23A1Q86Y22 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
COL23A1Q86Y22 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
COL23A1Q86Y22 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
COL23A1Q86Y22 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
COL23A1Q86Y22 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
COL23A1Q86Y22 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
COL23A1Q86Y22 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC33.29■■■□□ 2.92
COL23A1Q86Y22 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC33.29■■■□□ 2.92
COL23A1Q86Y22 GFER-205ENST00000569451 517 ntTSL 5 BASIC33.29■■■□□ 2.92
COL23A1Q86Y22 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC33.29■■■□□ 2.92
COL23A1Q86Y22 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
COL23A1Q86Y22 HYI-213ENST00000583037 1322 ntTSL 5 BASIC33.28■■■□□ 2.92
COL23A1Q86Y22 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
COL23A1Q86Y22 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
COL23A1Q86Y22 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC33.28■■■□□ 2.92
COL23A1Q86Y22 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
COL23A1Q86Y22 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC33.27■■■□□ 2.92
COL23A1Q86Y22 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC33.26■■■□□ 2.91
COL23A1Q86Y22 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
COL23A1Q86Y22 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
COL23A1Q86Y22 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC33.24■■■□□ 2.91
COL23A1Q86Y22 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC33.24■■■□□ 2.91
COL23A1Q86Y22 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC33.23■■■□□ 2.91
COL23A1Q86Y22 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC33.23■■■□□ 2.91
COL23A1Q86Y22 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC33.23■■■□□ 2.91
COL23A1Q86Y22 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
COL23A1Q86Y22 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
COL23A1Q86Y22 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
COL23A1Q86Y22 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC33.21■■■□□ 2.91
COL23A1Q86Y22 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
COL23A1Q86Y22 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
COL23A1Q86Y22 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC33.21■■■□□ 2.91
COL23A1Q86Y22 AC120057.4-201ENST00000624722 1615 ntBASIC33.2■■■□□ 2.91
COL23A1Q86Y22 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC33.2■■■□□ 2.9
COL23A1Q86Y22 AC004987.1-201ENST00000428627 508 ntBASIC33.19■■■□□ 2.9
COL23A1Q86Y22 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
COL23A1Q86Y22 TSPY13P-201ENST00000338964 914 ntBASIC33.18■■■□□ 2.9
COL23A1Q86Y22 RARRES2P1-201ENST00000474487 481 ntBASIC33.18■■■□□ 2.9
COL23A1Q86Y22 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
COL23A1Q86Y22 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC33.16■■■□□ 2.9
COL23A1Q86Y22 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
COL23A1Q86Y22 KRT18P60-201ENST00000312876 1297 ntBASIC33.16■■■□□ 2.9
COL23A1Q86Y22 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC33.15■■■□□ 2.9
COL23A1Q86Y22 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
COL23A1Q86Y22 AC060814.1-201ENST00000554326 538 ntBASIC33.15■■■□□ 2.9
COL23A1Q86Y22 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
COL23A1Q86Y22 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC33.14■■■□□ 2.9
COL23A1Q86Y22 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC33.13■■■□□ 2.89
COL23A1Q86Y22 ATP5G2P3-201ENST00000429083 425 ntBASIC33.13■■■□□ 2.89
COL23A1Q86Y22 CHST11-203ENST00000547956 936 ntTSL 2 BASIC33.13■■■□□ 2.89
COL23A1Q86Y22 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
COL23A1Q86Y22 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms