Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SYVN1Q86TM6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SYVN1Q86TM6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.45■■□□□ 1.66
SYVN1Q86TM6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SYVN1Q86TM6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SYVN1Q86TM6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.44■■□□□ 1.66
SYVN1Q86TM6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.44■■□□□ 1.66
SYVN1Q86TM6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SYVN1Q86TM6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.43■■□□□ 1.66
SYVN1Q86TM6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
SYVN1Q86TM6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SYVN1Q86TM6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SYVN1Q86TM6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SYVN1Q86TM6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.42■■□□□ 1.66
SYVN1Q86TM6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
SYVN1Q86TM6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SYVN1Q86TM6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SYVN1Q86TM6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SYVN1Q86TM6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SYVN1Q86TM6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SYVN1Q86TM6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
SYVN1Q86TM6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SYVN1Q86TM6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.4■■□□□ 1.66
SYVN1Q86TM6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.4■■□□□ 1.66
SYVN1Q86TM6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SYVN1Q86TM6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SYVN1Q86TM6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.39■■□□□ 1.66
SYVN1Q86TM6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SYVN1Q86TM6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SYVN1Q86TM6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.39■■□□□ 1.66
SYVN1Q86TM6 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SYVN1Q86TM6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
SYVN1Q86TM6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
SYVN1Q86TM6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SYVN1Q86TM6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SYVN1Q86TM6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.37■■□□□ 1.65
SYVN1Q86TM6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
SYVN1Q86TM6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SYVN1Q86TM6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.36■■□□□ 1.65
SYVN1Q86TM6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.36■■□□□ 1.65
SYVN1Q86TM6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.36■■□□□ 1.65
SYVN1Q86TM6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SYVN1Q86TM6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.35■■□□□ 1.65
SYVN1Q86TM6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SYVN1Q86TM6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.34■■□□□ 1.65
SYVN1Q86TM6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SYVN1Q86TM6 AC142086.6-201ENST00000621154 1765 ntBASIC25.33■■□□□ 1.65
SYVN1Q86TM6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SYVN1Q86TM6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
SYVN1Q86TM6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SYVN1Q86TM6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.33■■□□□ 1.65
SYVN1Q86TM6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SYVN1Q86TM6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.31■■□□□ 1.64
SYVN1Q86TM6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SYVN1Q86TM6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.3■■□□□ 1.64
SYVN1Q86TM6 ZNRF2P2-203ENST00000454624 420 ntBASIC25.3■■□□□ 1.64
SYVN1Q86TM6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
SYVN1Q86TM6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SYVN1Q86TM6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SYVN1Q86TM6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SYVN1Q86TM6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.28■■□□□ 1.64
SYVN1Q86TM6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SYVN1Q86TM6 DRD5P2-201ENST00000421395 2012 ntBASIC25.28■■□□□ 1.64
SYVN1Q86TM6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
SYVN1Q86TM6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SYVN1Q86TM6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.27■■□□□ 1.64
SYVN1Q86TM6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SYVN1Q86TM6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.27■■□□□ 1.64
SYVN1Q86TM6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
SYVN1Q86TM6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SYVN1Q86TM6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SYVN1Q86TM6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SYVN1Q86TM6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
SYVN1Q86TM6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
SYVN1Q86TM6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.26■■□□□ 1.63
SYVN1Q86TM6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SYVN1Q86TM6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SYVN1Q86TM6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.25■■□□□ 1.63
SYVN1Q86TM6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SYVN1Q86TM6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.24■■□□□ 1.63
SYVN1Q86TM6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.24■■□□□ 1.63
SYVN1Q86TM6 HLA-V-202ENST00000446817 847 ntBASIC25.24■■□□□ 1.63
SYVN1Q86TM6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SYVN1Q86TM6 DUX4L29-201ENST00000425409 679 ntBASIC25.23■■□□□ 1.63
SYVN1Q86TM6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SYVN1Q86TM6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.23■■□□□ 1.63
SYVN1Q86TM6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
SYVN1Q86TM6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SYVN1Q86TM6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SYVN1Q86TM6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.23■■□□□ 1.63
SYVN1Q86TM6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SYVN1Q86TM6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.22■■□□□ 1.63
SYVN1Q86TM6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
SYVN1Q86TM6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SYVN1Q86TM6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.22■■□□□ 1.63
SYVN1Q86TM6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SYVN1Q86TM6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.21■■□□□ 1.63
SYVN1Q86TM6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SYVN1Q86TM6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SYVN1Q86TM6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms