Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.07■□□□□ 0.96
TREML4Q6UXN2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TREML4Q6UXN2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TREML4Q6UXN2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TREML4Q6UXN2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TREML4Q6UXN2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TREML4Q6UXN2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
TREML4Q6UXN2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.06■□□□□ 0.96
TREML4Q6UXN2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TREML4Q6UXN2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TREML4Q6UXN2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TREML4Q6UXN2 AL135925.1-201ENST00000605920 1701 ntBASIC21.05■□□□□ 0.96
TREML4Q6UXN2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TREML4Q6UXN2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TREML4Q6UXN2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TREML4Q6UXN2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TREML4Q6UXN2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
TREML4Q6UXN2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TREML4Q6UXN2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
TREML4Q6UXN2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TREML4Q6UXN2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TREML4Q6UXN2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.03■□□□□ 0.96
TREML4Q6UXN2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.03■□□□□ 0.96
TREML4Q6UXN2 AC016575.1-201ENST00000607026 382 ntBASIC21.03■□□□□ 0.96
TREML4Q6UXN2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TREML4Q6UXN2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TREML4Q6UXN2 MIR3648-2-201ENST00000581792 180 ntBASIC21.02■□□□□ 0.96
TREML4Q6UXN2 AC021231.2-201ENST00000594613 730 ntBASIC21.02■□□□□ 0.96
TREML4Q6UXN2 MIR3648-1-201ENST00000615959 180 ntBASIC21.02■□□□□ 0.96
TREML4Q6UXN2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TREML4Q6UXN2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.01■□□□□ 0.95
TREML4Q6UXN2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.01■□□□□ 0.95
TREML4Q6UXN2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.01■□□□□ 0.95
TREML4Q6UXN2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TREML4Q6UXN2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TREML4Q6UXN2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21■□□□□ 0.95
TREML4Q6UXN2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21■□□□□ 0.95
TREML4Q6UXN2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21■□□□□ 0.95
TREML4Q6UXN2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TREML4Q6UXN2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TREML4Q6UXN2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TREML4Q6UXN2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.99■□□□□ 0.95
TREML4Q6UXN2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TREML4Q6UXN2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TREML4Q6UXN2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TREML4Q6UXN2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TREML4Q6UXN2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TREML4Q6UXN2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TREML4Q6UXN2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TREML4Q6UXN2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TREML4Q6UXN2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TREML4Q6UXN2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TREML4Q6UXN2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.98■□□□□ 0.95
TREML4Q6UXN2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TREML4Q6UXN2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TREML4Q6UXN2 AC142086.6-201ENST00000621154 1765 ntBASIC20.97■□□□□ 0.95
TREML4Q6UXN2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TREML4Q6UXN2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TREML4Q6UXN2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TREML4Q6UXN2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.97■□□□□ 0.95
TREML4Q6UXN2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.97■□□□□ 0.95
TREML4Q6UXN2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TREML4Q6UXN2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.96■□□□□ 0.95
TREML4Q6UXN2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
TREML4Q6UXN2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.95■□□□□ 0.94
TREML4Q6UXN2 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.95■□□□□ 0.94
TREML4Q6UXN2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TREML4Q6UXN2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TREML4Q6UXN2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TREML4Q6UXN2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TREML4Q6UXN2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.94■□□□□ 0.94
TREML4Q6UXN2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TREML4Q6UXN2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TREML4Q6UXN2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TREML4Q6UXN2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TREML4Q6UXN2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.92■□□□□ 0.94
TREML4Q6UXN2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TREML4Q6UXN2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TREML4Q6UXN2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.92■□□□□ 0.94
TREML4Q6UXN2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TREML4Q6UXN2 WASH5P-204ENST00000632292 975 ntBASIC20.92■□□□□ 0.94
TREML4Q6UXN2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TREML4Q6UXN2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.92■□□□□ 0.94
TREML4Q6UXN2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TREML4Q6UXN2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TREML4Q6UXN2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
TREML4Q6UXN2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TREML4Q6UXN2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TREML4Q6UXN2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TREML4Q6UXN2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TREML4Q6UXN2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TREML4Q6UXN2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TREML4Q6UXN2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TREML4Q6UXN2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TREML4Q6UXN2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.89■□□□□ 0.93
TREML4Q6UXN2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.88■□□□□ 0.93
TREML4Q6UXN2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TREML4Q6UXN2 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TREML4Q6UXN2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TREML4Q6UXN2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms