Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
FOXR1Q6PIV2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
FOXR1Q6PIV2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.79■■□□□ 1.88
FOXR1Q6PIV2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
FOXR1Q6PIV2 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
FOXR1Q6PIV2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
FOXR1Q6PIV2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
FOXR1Q6PIV2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
FOXR1Q6PIV2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.76■■□□□ 1.88
FOXR1Q6PIV2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.76■■□□□ 1.87
FOXR1Q6PIV2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
FOXR1Q6PIV2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
FOXR1Q6PIV2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
FOXR1Q6PIV2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.75■■□□□ 1.87
FOXR1Q6PIV2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.74■■□□□ 1.87
FOXR1Q6PIV2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
FOXR1Q6PIV2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.74■■□□□ 1.87
FOXR1Q6PIV2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
FOXR1Q6PIV2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
FOXR1Q6PIV2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.73■■□□□ 1.87
FOXR1Q6PIV2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
FOXR1Q6PIV2 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.73■■□□□ 1.87
FOXR1Q6PIV2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
FOXR1Q6PIV2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.73■■□□□ 1.87
FOXR1Q6PIV2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
FOXR1Q6PIV2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
FOXR1Q6PIV2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
FOXR1Q6PIV2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.72■■□□□ 1.87
FOXR1Q6PIV2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
FOXR1Q6PIV2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
FOXR1Q6PIV2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
FOXR1Q6PIV2 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.71■■□□□ 1.87
FOXR1Q6PIV2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
FOXR1Q6PIV2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
FOXR1Q6PIV2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
FOXR1Q6PIV2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
FOXR1Q6PIV2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
FOXR1Q6PIV2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
FOXR1Q6PIV2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
FOXR1Q6PIV2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
FOXR1Q6PIV2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
FOXR1Q6PIV2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
FOXR1Q6PIV2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
FOXR1Q6PIV2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
FOXR1Q6PIV2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
FOXR1Q6PIV2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
FOXR1Q6PIV2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
FOXR1Q6PIV2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.66■■□□□ 1.86
FOXR1Q6PIV2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
FOXR1Q6PIV2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
FOXR1Q6PIV2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.64■■□□□ 1.86
FOXR1Q6PIV2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
FOXR1Q6PIV2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
FOXR1Q6PIV2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
FOXR1Q6PIV2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.63■■□□□ 1.85
FOXR1Q6PIV2 DRD5P2-201ENST00000421395 2012 ntBASIC26.62■■□□□ 1.85
FOXR1Q6PIV2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
FOXR1Q6PIV2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
FOXR1Q6PIV2 MIR3665-201ENST00000578708 105 ntBASIC26.61■■□□□ 1.85
FOXR1Q6PIV2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
FOXR1Q6PIV2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
FOXR1Q6PIV2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
FOXR1Q6PIV2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
FOXR1Q6PIV2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.59■■□□□ 1.85
FOXR1Q6PIV2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.58■■□□□ 1.85
FOXR1Q6PIV2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
FOXR1Q6PIV2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
FOXR1Q6PIV2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
FOXR1Q6PIV2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
FOXR1Q6PIV2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
FOXR1Q6PIV2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.56■■□□□ 1.84
FOXR1Q6PIV2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
FOXR1Q6PIV2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
FOXR1Q6PIV2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
FOXR1Q6PIV2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
FOXR1Q6PIV2 MIR7108-201ENST00000614319 87 ntBASIC26.54■■□□□ 1.84
FOXR1Q6PIV2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.54■■□□□ 1.84
FOXR1Q6PIV2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.54■■□□□ 1.84
FOXR1Q6PIV2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.54■■□□□ 1.84
FOXR1Q6PIV2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.53■■□□□ 1.84
FOXR1Q6PIV2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
FOXR1Q6PIV2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
FOXR1Q6PIV2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.53■■□□□ 1.84
FOXR1Q6PIV2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
FOXR1Q6PIV2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
FOXR1Q6PIV2 ABHD17AP4-201ENST00000411545 909 ntBASIC26.52■■□□□ 1.84
FOXR1Q6PIV2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.52■■□□□ 1.84
FOXR1Q6PIV2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
FOXR1Q6PIV2 AL449106.1-201ENST00000608517 1980 ntBASIC26.51■■□□□ 1.83
FOXR1Q6PIV2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
FOXR1Q6PIV2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
FOXR1Q6PIV2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.5■■□□□ 1.83
FOXR1Q6PIV2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
FOXR1Q6PIV2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
FOXR1Q6PIV2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.49■■□□□ 1.83
FOXR1Q6PIV2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
FOXR1Q6PIV2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
FOXR1Q6PIV2 DUX4L28-201ENST00000623687 678 ntBASIC26.49■■□□□ 1.83
FOXR1Q6PIV2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.49■■□□□ 1.83
FOXR1Q6PIV2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms