Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01554Q52M75 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01554Q52M75 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01554Q52M75 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01554Q52M75 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01554Q52M75 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01554Q52M75 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01554Q52M75 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01554Q52M75 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01554Q52M75 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01554Q52M75 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
LINC01554Q52M75 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01554Q52M75 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01554Q52M75 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01554Q52M75 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01554Q52M75 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01554Q52M75 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
LINC01554Q52M75 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01554Q52M75 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01554Q52M75 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
LINC01554Q52M75 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LINC01554Q52M75 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01554Q52M75 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01554Q52M75 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01554Q52M75 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
LINC01554Q52M75 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01554Q52M75 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01554Q52M75 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01554Q52M75 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01554Q52M75 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01554Q52M75 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01554Q52M75 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
LINC01554Q52M75 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01554Q52M75 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC01554Q52M75 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01554Q52M75 CLDN5-201ENST00000403084 2357 ntBASIC12.88□□□□□ -0.35
LINC01554Q52M75 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
LINC01554Q52M75 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC01554Q52M75 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01554Q52M75 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01554Q52M75 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01554Q52M75 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LINC01554Q52M75 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC01554Q52M75 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01554Q52M75 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC01554Q52M75 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01554Q52M75 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LINC01554Q52M75 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01554Q52M75 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01554Q52M75 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01554Q52M75 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01554Q52M75 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01554Q52M75 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01554Q52M75 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01554Q52M75 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01554Q52M75 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
LINC01554Q52M75 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01554Q52M75 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01554Q52M75 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC01554Q52M75 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
LINC01554Q52M75 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01554Q52M75 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01554Q52M75 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
LINC01554Q52M75 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01554Q52M75 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC01554Q52M75 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01554Q52M75 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01554Q52M75 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01554Q52M75 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01554Q52M75 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01554Q52M75 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
LINC01554Q52M75 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC12.84□□□□□ -0.35
LINC01554Q52M75 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
LINC01554Q52M75 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LINC01554Q52M75 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC12.83□□□□□ -0.35
LINC01554Q52M75 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01554Q52M75 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01554Q52M75 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC12.83□□□□□ -0.36
LINC01554Q52M75 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01554Q52M75 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC01554Q52M75 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01554Q52M75 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LINC01554Q52M75 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01554Q52M75 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LINC01554Q52M75 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01554Q52M75 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01554Q52M75 ABCB10P1-201ENST00000614297 2181 ntBASIC12.81□□□□□ -0.36
LINC01554Q52M75 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01554Q52M75 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01554Q52M75 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01554Q52M75 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
LINC01554Q52M75 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
LINC01554Q52M75 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01554Q52M75 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC01554Q52M75 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01554Q52M75 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01554Q52M75 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01554Q52M75 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC01554Q52M75 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01554Q52M75 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 363.6 ms