RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 DCAF8L2P0C7V8 631 aa33.03■■■□□ 2.88
COL15A1-201ENST00000375001 PELP1Q8IZL8 1130 aaKnown RBP32.18■■■□□ 2.74
COL15A1-201ENST00000375001 SUPT5HO00267 1087 aaKnown RBP32.14■■■□□ 2.74
COL15A1-201ENST00000375001 NISCHQ9Y2I1 1504 aa31.94■■■□□ 2.7
COL15A1-201ENST00000375001 SHROOM4Q9ULL8 1493 aa31.51■■■□□ 2.64
COL15A1-201ENST00000375001 EHMT2Q96KQ7 1210 aa31.21■■■□□ 2.59
COL15A1-201ENST00000375001 ERICH6Q7L0X2 663 aa31.06■■■□□ 2.56
COL15A1-201ENST00000375001 MYT1Q01538 1121 aa30.9■■■□□ 2.54
COL15A1-201ENST00000375001 CENPBP07199 599 aaPredicted RBP30.8■■■□□ 2.52
COL15A1-201ENST00000375001 PCGF6Q9BYE7 350 aa30.72■■■□□ 2.51
COL15A1-201ENST00000375001 CCER1Q8TC90 406 aaPredicted RBP30.67■■■□□ 2.5
COL15A1-201ENST00000375001 APLP2Q06481 763 aa30.48■■■□□ 2.47
COL15A1-201ENST00000375001 TTBK1Q5TCY1 1321 aaPredicted RBP30.33■■■□□ 2.45
COL15A1-201ENST00000375001 FAM9AQ8IZU1 332 aaPredicted RBP30.3■■■□□ 2.44
COL15A1-201ENST00000375001 ZEB1P37275 1124 aaPredicted RBP30.19■■■□□ 2.42
COL15A1-201ENST00000375001 YTHDC1Q96MU7 727 aaKnown RBP30.08■■■□□ 2.41
COL15A1-201ENST00000375001 NEFLP07196 543 aa30.02■■■□□ 2.4
COL15A1-201ENST00000375001 TRIM41Q8WV44 630 aa29.62■■■□□ 2.33
COL15A1-201ENST00000375001 RANGAP1P46060 587 aaPredicted RBP29.48■■■□□ 2.31
COL15A1-201ENST00000375001 DAXXQ9UER7 740 aaPredicted RBP29.33■■■□□ 2.29
COL15A1-201ENST00000375001 HRCP23327 699 aa29.33■■■□□ 2.29
COL15A1-201ENST00000375001 PPARGC1BQ86YN6 1023 aaKnown RBP29.23■■■□□ 2.27
COL15A1-201ENST00000375001 TRIM26Q12899 539 aaPredicted RBP29.16■■■□□ 2.26
COL15A1-201ENST00000375001 ATP1B4Q9UN42 357 aaPredicted RBP29.15■■■□□ 2.26
COL15A1-201ENST00000375001 UBTFP17480 764 aaKnown RBP29.14■■■□□ 2.26
COL15A1-201ENST00000375001 RTL5Q5HYW3 569 aaPredicted RBP28.96■■■□□ 2.23
COL15A1-201ENST00000375001 LOC105371045A0A1W2PR82 267 aa28.93■■■□□ 2.22
COL15A1-201ENST00000375001 CHIC1Q5VXU3 224 aa28.84■■■□□ 2.21
COL15A1-201ENST00000375001 POLR3GLQ9BT43 218 aa28.64■■■□□ 2.18
COL15A1-201ENST00000375001 ZNF316A6NFI3 1004 aaPredicted RBP28.64■■■□□ 2.17
COL15A1-201ENST00000375001 CNGB1Q14028 1251 aaPredicted RBP28.54■■■□□ 2.16
COL15A1-201ENST00000375001 DIEXFQ68CQ4 756 aaKnown RBP28.48■■■□□ 2.15
COL15A1-201ENST00000375001 GTF3C3Q9Y5Q9 886 aa28.43■■■□□ 2.14
COL15A1-201ENST00000375001 ITGAEP38570 1179 aa28.43■■■□□ 2.14
COL15A1-201ENST00000375001 CLSPNQ9HAW4 1339 aa28.41■■■□□ 2.14
COL15A1-201ENST00000375001 HNRNPUL2Q1KMD3 747 aaKnown RBP28.4■■■□□ 2.14
COL15A1-201ENST00000375001 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.37■■■□□ 2.13
COL15A1-201ENST00000375001 BCANQ96GW7 911 aa28.36■■■□□ 2.13
COL15A1-201ENST00000375001 CDK11AQ9UQ88 783 aaPredicted RBP28.08■■■□□ 2.09
COL15A1-201ENST00000375001 EIF5BO60841 1220 aaKnown RBP28.04■■■□□ 2.08
COL15A1-201ENST00000375001 SLC4A1APQ9BWU0 796 aaKnown RBP27.85■■■□□ 2.05
COL15A1-201ENST00000375001 ACIN1Q9UKV3 1341 aaKnown RBP27.82■■■□□ 2.04
COL15A1-201ENST00000375001 MYT1LQ9UL68 1186 aa27.81■■■□□ 2.04
COL15A1-201ENST00000375001 ANP32AP39687 249 aaKnown RBP27.67■■■□□ 2.02
COL15A1-201ENST00000375001 ANP32CO43423 234 aa27.64■■■□□ 2.01
COL15A1-201ENST00000375001 GLIPR1L2Q4G1C9 344 aa27.62■■■□□ 2.01
COL15A1-201ENST00000375001 NEUROD1Q13562 356 aa27.57■■■□□ 2
COL15A1-201ENST00000375001 NPM2Q86SE8 214 aaKnown RBP27.57■■■□□ 2
COL15A1-201ENST00000375001 FAM50AQ14320 339 aaKnown RBP27.54■■■□□ 2
COL15A1-201ENST00000375001 ZBTB47Q9UFB7 747 aaPredicted RBP27.5■■□□□ 1.99
COL15A1-201ENST00000375001 BCL11AQ9H165 835 aa27.46■■□□□ 1.99
COL15A1-201ENST00000375001 TRIM52Q96A61 297 aa27.36■■□□□ 1.97
COL15A1-201ENST00000375001 CANXP27824 592 aaKnown RBP27.35■■□□□ 1.97
COL15A1-201ENST00000375001 ANP32BQ92688 251 aaKnown RBP27.34■■□□□ 1.97
COL15A1-201ENST00000375001 FKBP8Q14318 412 aa27.32■■□□□ 1.96
COL15A1-201ENST00000375001 NBR1Q14596 966 aa27.27■■□□□ 1.96
COL15A1-201ENST00000375001 ZNF326Q5BKZ1 582 aaKnown RBP27.26■■□□□ 1.95
COL15A1-201ENST00000375001 PABPN1Q86U42 306 aaKnown RBP eCLIP27.11■■□□□ 1.93
COL15A1-201ENST00000375001 HSP90AA1P07900 732 aaKnown RBP27.08■■□□□ 1.93
COL15A1-201ENST00000375001 ARXQ96QS3 562 aa27.07■■□□□ 1.92
COL15A1-201ENST00000375001 DCAF1Q9Y4B6 1507 aa27.06■■□□□ 1.92
COL15A1-201ENST00000375001 CSRNP3Q8WYN3 585 aa27.03■■□□□ 1.92
COL15A1-201ENST00000375001 SCAF1Q9H7N4 1312 aaKnown RBP27.01■■□□□ 1.91
COL15A1-201ENST00000375001 ABCC9O60706 1549 aa26.99■■□□□ 1.91
COL15A1-201ENST00000375001 SLC24A1O60721 1099 aa26.98■■□□□ 1.91
COL15A1-201ENST00000375001 UPF2Q9HAU5 1272 aaKnown RBP26.92■■□□□ 1.9
COL15A1-201ENST00000375001 HNRNPUQ00839 825 aaKnown RBP eCLIP26.89■■□□□ 1.9
COL15A1-201ENST00000375001 P3H3Q8IVL6 736 aa26.83■■□□□ 1.89
COL15A1-201ENST00000375001 NEFMP07197 916 aa26.83■■□□□ 1.89
COL15A1-201ENST00000375001 CCDC136Q96JN2 1154 aa26.8■■□□□ 1.88
COL15A1-201ENST00000375001 FAM9BQ8IZU0 186 aa26.74■■□□□ 1.87
COL15A1-201ENST00000375001 ANP32EQ9BTT0 268 aa26.72■■□□□ 1.87
COL15A1-201ENST00000375001 DDX10Q13206 875 aaKnown RBP26.71■■□□□ 1.87
COL15A1-201ENST00000375001 MIER1Q8N108 512 aa26.67■■□□□ 1.86
COL15A1-201ENST00000375001 MYO15BQ96JP2 1530 aa26.66■■□□□ 1.86
COL15A1-201ENST00000375001 SALL2Q9Y467 1007 aaPredicted RBP26.66■■□□□ 1.86
COL15A1-201ENST00000375001 ARID3CA6NKF2 412 aa26.64■■□□□ 1.86
COL15A1-201ENST00000375001 IRX6P78412 446 aaPredicted RBP26.63■■□□□ 1.85
COL15A1-201ENST00000375001 TNNT2P45379 298 aaPredicted RBP26.57■■□□□ 1.84
COL15A1-201ENST00000375001 TRIM44Q96DX7 344 aaPredicted RBP26.56■■□□□ 1.84
COL15A1-201ENST00000375001 RTN4Q9NQC3 1192 aaKnown RBP26.56■■□□□ 1.84
COL15A1-201ENST00000375001 TONSLQ96HA7 1378 aa26.53■■□□□ 1.84
COL15A1-201ENST00000375001 ZCCHC6Q5VYS8 1495 aaKnown RBP26.51■■□□□ 1.83
COL15A1-201ENST00000375001 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.5■■□□□ 1.83
COL15A1-201ENST00000375001 FBLN2P98095 1184 aa26.44■■□□□ 1.82
COL15A1-201ENST00000375001 ZNF777Q9ULD5 760 aaPredicted RBP26.41■■□□□ 1.82
COL15A1-201ENST00000375001 SCRIBQ14160 1630 aa26.4■■□□□ 1.82
COL15A1-201ENST00000375001 ERICH6BQ5W0A0 696 aa26.39■■□□□ 1.82
COL15A1-201ENST00000375001 NAP1L5Q96NT1 182 aaPredicted RBP26.39■■□□□ 1.82
COL15A1-201ENST00000375001 TMC1Q8TDI8 760 aa26.38■■□□□ 1.81
COL15A1-201ENST00000375001 DDRGK1Q96HY6 314 aa26.37■■□□□ 1.81
COL15A1-201ENST00000375001 HIRIP3Q9BW71 556 aaPredicted RBP26.34■■□□□ 1.81
COL15A1-201ENST00000375001 MRS2Q9HD23 443 aa26.33■■□□□ 1.81
COL15A1-201ENST00000375001 BECN1Q14457 450 aa26.31■■□□□ 1.8
COL15A1-201ENST00000375001 DNTTIP2Q5QJE6 756 aaKnown RBP26.25■■□□□ 1.79
COL15A1-201ENST00000375001 PTMAP06454 111 aaKnown RBP26.24■■□□□ 1.79
COL15A1-201ENST00000375001 NCLP19338 710 aaKnown RBP26.22■■□□□ 1.79
COL15A1-201ENST00000375001 CHIC2Q9UKJ5 165 aa26.22■■□□□ 1.79
COL15A1-201ENST00000375001 GOLGA6L22H0YM25 854 aa26.21■■□□□ 1.79
COL15A1-201ENST00000375001 PPM1GO15355 546 aaPredicted RBP26.2■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms