Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
FOXN1O15353 MTURN-203ENST00000409688 843 ntTSL 2 BASIC31.36■■■□□ 2.61
FOXN1O15353 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.35■■■□□ 2.61
FOXN1O15353 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.35■■■□□ 2.61
FOXN1O15353 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
FOXN1O15353 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.33■■■□□ 2.61
FOXN1O15353 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
FOXN1O15353 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.32■■■□□ 2.6
FOXN1O15353 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
FOXN1O15353 RARRES2P1-201ENST00000474487 481 ntBASIC31.31■■■□□ 2.6
FOXN1O15353 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
FOXN1O15353 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.29■■■□□ 2.6
FOXN1O15353 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.29■■■□□ 2.6
FOXN1O15353 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
FOXN1O15353 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
FOXN1O15353 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.27■■■□□ 2.6
FOXN1O15353 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
FOXN1O15353 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
FOXN1O15353 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
FOXN1O15353 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
FOXN1O15353 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
FOXN1O15353 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
FOXN1O15353 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
FOXN1O15353 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.24■■■□□ 2.59
FOXN1O15353 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
FOXN1O15353 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
FOXN1O15353 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.23■■■□□ 2.59
FOXN1O15353 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.22■■■□□ 2.59
FOXN1O15353 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.22■■■□□ 2.59
FOXN1O15353 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
FOXN1O15353 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
FOXN1O15353 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.2■■■□□ 2.59
FOXN1O15353 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
FOXN1O15353 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
FOXN1O15353 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.18■■■□□ 2.58
FOXN1O15353 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
FOXN1O15353 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
FOXN1O15353 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
FOXN1O15353 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
FOXN1O15353 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.17■■■□□ 2.58
FOXN1O15353 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.17■■■□□ 2.58
FOXN1O15353 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
FOXN1O15353 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
FOXN1O15353 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
FOXN1O15353 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
FOXN1O15353 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.15■■■□□ 2.58
FOXN1O15353 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.14■■■□□ 2.58
FOXN1O15353 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
FOXN1O15353 AC022413.1-201ENST00000624602 984 ntBASIC31.14■■■□□ 2.58
FOXN1O15353 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
FOXN1O15353 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
FOXN1O15353 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
FOXN1O15353 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
FOXN1O15353 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
FOXN1O15353 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
FOXN1O15353 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
FOXN1O15353 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.11■■■□□ 2.57
FOXN1O15353 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
FOXN1O15353 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.1■■■□□ 2.57
FOXN1O15353 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.1■■■□□ 2.57
FOXN1O15353 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
FOXN1O15353 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
FOXN1O15353 U85056.1-201ENST00000616429 682 ntBASIC31.1■■■□□ 2.57
FOXN1O15353 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
FOXN1O15353 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.09■■■□□ 2.57
FOXN1O15353 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
FOXN1O15353 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.09■■■□□ 2.57
FOXN1O15353 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
FOXN1O15353 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
FOXN1O15353 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
FOXN1O15353 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.07■■■□□ 2.56
FOXN1O15353 TSPY13P-201ENST00000338964 914 ntBASIC31.07■■■□□ 2.56
FOXN1O15353 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
FOXN1O15353 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
FOXN1O15353 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.06■■■□□ 2.56
FOXN1O15353 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
FOXN1O15353 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
FOXN1O15353 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
FOXN1O15353 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
FOXN1O15353 AC120057.4-201ENST00000624722 1615 ntBASIC31.04■■■□□ 2.56
FOXN1O15353 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.03■■■□□ 2.56
FOXN1O15353 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
FOXN1O15353 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
FOXN1O15353 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
FOXN1O15353 MIR935-201ENST00000401179 91 ntBASIC31■■■□□ 2.55
FOXN1O15353 AC004987.1-201ENST00000428627 508 ntBASIC31■■■□□ 2.55
FOXN1O15353 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31■■■□□ 2.55
FOXN1O15353 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
FOXN1O15353 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.98■■■□□ 2.55
FOXN1O15353 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC30.98■■■□□ 2.55
FOXN1O15353 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
FOXN1O15353 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
FOXN1O15353 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.97■■■□□ 2.55
FOXN1O15353 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
FOXN1O15353 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
FOXN1O15353 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
FOXN1O15353 GUK1-208ENST00000366728 842 ntTSL 2 BASIC30.96■■■□□ 2.55
FOXN1O15353 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.96■■■□□ 2.55
FOXN1O15353 AL035685.1-201ENST00000636663 812 ntBASIC30.96■■■□□ 2.55
FOXN1O15353 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30.96■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 196 ms