Protein–RNA interactions for Protein: A0A0C4DH27

TRGV8, T-cell receptor gamma variable 8 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV8A0A0C4DH27 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRGV8A0A0C4DH27 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRGV8A0A0C4DH27 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRGV8A0A0C4DH27 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRGV8A0A0C4DH27 GPX1-201ENST00000419349 1106 ntBASIC23.37■■□□□ 1.33
TRGV8A0A0C4DH27 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.37■■□□□ 1.33
TRGV8A0A0C4DH27 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.37■■□□□ 1.33
TRGV8A0A0C4DH27 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRGV8A0A0C4DH27 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRGV8A0A0C4DH27 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRGV8A0A0C4DH27 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
TRGV8A0A0C4DH27 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.36■■□□□ 1.33
TRGV8A0A0C4DH27 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
TRGV8A0A0C4DH27 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
TRGV8A0A0C4DH27 AL161658.1-201ENST00000623641 1967 ntBASIC23.36■■□□□ 1.33
TRGV8A0A0C4DH27 ABHD17AP5-201ENST00000580133 923 ntBASIC23.35■■□□□ 1.33
TRGV8A0A0C4DH27 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRGV8A0A0C4DH27 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRGV8A0A0C4DH27 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRGV8A0A0C4DH27 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
TRGV8A0A0C4DH27 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.34■■□□□ 1.33
TRGV8A0A0C4DH27 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TRGV8A0A0C4DH27 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TRGV8A0A0C4DH27 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.33■■□□□ 1.33
TRGV8A0A0C4DH27 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRGV8A0A0C4DH27 LINC00273-201ENST00000539813 1452 ntBASIC23.32■■□□□ 1.32
TRGV8A0A0C4DH27 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRGV8A0A0C4DH27 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.32■■□□□ 1.32
TRGV8A0A0C4DH27 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRGV8A0A0C4DH27 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
TRGV8A0A0C4DH27 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRGV8A0A0C4DH27 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRGV8A0A0C4DH27 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
TRGV8A0A0C4DH27 RNF126P1-201ENST00000567452 1320 ntBASIC23.29■■□□□ 1.32
TRGV8A0A0C4DH27 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRGV8A0A0C4DH27 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRGV8A0A0C4DH27 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
TRGV8A0A0C4DH27 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRGV8A0A0C4DH27 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRGV8A0A0C4DH27 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.27■■□□□ 1.32
TRGV8A0A0C4DH27 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRGV8A0A0C4DH27 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
TRGV8A0A0C4DH27 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRGV8A0A0C4DH27 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TRGV8A0A0C4DH27 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRGV8A0A0C4DH27 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.25■■□□□ 1.31
TRGV8A0A0C4DH27 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.25■■□□□ 1.31
TRGV8A0A0C4DH27 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.25■■□□□ 1.31
TRGV8A0A0C4DH27 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRGV8A0A0C4DH27 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRGV8A0A0C4DH27 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRGV8A0A0C4DH27 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
TRGV8A0A0C4DH27 AC010864.1-201ENST00000609407 1511 ntBASIC23.23■■□□□ 1.31
TRGV8A0A0C4DH27 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
TRGV8A0A0C4DH27 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TRGV8A0A0C4DH27 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRGV8A0A0C4DH27 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
TRGV8A0A0C4DH27 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
TRGV8A0A0C4DH27 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRGV8A0A0C4DH27 AC022413.1-201ENST00000624602 984 ntBASIC23.2■■□□□ 1.3
TRGV8A0A0C4DH27 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.19■■□□□ 1.3
TRGV8A0A0C4DH27 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
TRGV8A0A0C4DH27 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRGV8A0A0C4DH27 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.19■■□□□ 1.3
TRGV8A0A0C4DH27 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRGV8A0A0C4DH27 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TRGV8A0A0C4DH27 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRGV8A0A0C4DH27 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRGV8A0A0C4DH27 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
TRGV8A0A0C4DH27 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.17■■□□□ 1.3
TRGV8A0A0C4DH27 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.17■■□□□ 1.3
TRGV8A0A0C4DH27 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRGV8A0A0C4DH27 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
TRGV8A0A0C4DH27 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.16■■□□□ 1.3
TRGV8A0A0C4DH27 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
TRGV8A0A0C4DH27 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
TRGV8A0A0C4DH27 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TRGV8A0A0C4DH27 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRGV8A0A0C4DH27 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.14■■□□□ 1.29
TRGV8A0A0C4DH27 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.14■■□□□ 1.29
TRGV8A0A0C4DH27 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRGV8A0A0C4DH27 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRGV8A0A0C4DH27 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRGV8A0A0C4DH27 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRGV8A0A0C4DH27 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRGV8A0A0C4DH27 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.13■■□□□ 1.29
TRGV8A0A0C4DH27 AC008813.1-201ENST00000536597 885 ntBASIC23.13■■□□□ 1.29
TRGV8A0A0C4DH27 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
TRGV8A0A0C4DH27 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC23.12■■□□□ 1.29
TRGV8A0A0C4DH27 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRGV8A0A0C4DH27 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRGV8A0A0C4DH27 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
TRGV8A0A0C4DH27 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.12■■□□□ 1.29
TRGV8A0A0C4DH27 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.12■■□□□ 1.29
TRGV8A0A0C4DH27 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRGV8A0A0C4DH27 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TRGV8A0A0C4DH27 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRGV8A0A0C4DH27 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRGV8A0A0C4DH27 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TRGV8A0A0C4DH27 NTF6A-201ENST00000591175 560 ntBASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms