Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
TRBV25-1A0A075B6N4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.5■□□□□ 0.55
TRBV25-1A0A075B6N4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV25-1A0A075B6N4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV25-1A0A075B6N4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV25-1A0A075B6N4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV25-1A0A075B6N4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV25-1A0A075B6N4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV25-1A0A075B6N4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV25-1A0A075B6N4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.48■□□□□ 0.55
TRBV25-1A0A075B6N4 WASH5P-204ENST00000632292 975 ntBASIC18.48■□□□□ 0.55
TRBV25-1A0A075B6N4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV25-1A0A075B6N4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TRBV25-1A0A075B6N4 AL135925.1-201ENST00000605920 1701 ntBASIC18.47■□□□□ 0.55
TRBV25-1A0A075B6N4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV25-1A0A075B6N4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TRBV25-1A0A075B6N4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV25-1A0A075B6N4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV25-1A0A075B6N4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.45■□□□□ 0.54
TRBV25-1A0A075B6N4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV25-1A0A075B6N4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRBV25-1A0A075B6N4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV25-1A0A075B6N4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV25-1A0A075B6N4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV25-1A0A075B6N4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV25-1A0A075B6N4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV25-1A0A075B6N4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC18.43■□□□□ 0.54
TRBV25-1A0A075B6N4 AL133380.1-201ENST00000506013 324 ntBASIC18.43■□□□□ 0.54
TRBV25-1A0A075B6N4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV25-1A0A075B6N4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.43■□□□□ 0.54
TRBV25-1A0A075B6N4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV25-1A0A075B6N4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV25-1A0A075B6N4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV25-1A0A075B6N4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV25-1A0A075B6N4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV25-1A0A075B6N4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV25-1A0A075B6N4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV25-1A0A075B6N4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV25-1A0A075B6N4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TRBV25-1A0A075B6N4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV25-1A0A075B6N4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TRBV25-1A0A075B6N4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV25-1A0A075B6N4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV25-1A0A075B6N4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRBV25-1A0A075B6N4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
TRBV25-1A0A075B6N4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV25-1A0A075B6N4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV25-1A0A075B6N4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.38■□□□□ 0.53
TRBV25-1A0A075B6N4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV25-1A0A075B6N4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRBV25-1A0A075B6N4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV25-1A0A075B6N4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV25-1A0A075B6N4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV25-1A0A075B6N4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.37■□□□□ 0.53
TRBV25-1A0A075B6N4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV25-1A0A075B6N4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV25-1A0A075B6N4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.37■□□□□ 0.53
TRBV25-1A0A075B6N4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV25-1A0A075B6N4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV25-1A0A075B6N4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRBV25-1A0A075B6N4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV25-1A0A075B6N4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRBV25-1A0A075B6N4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV25-1A0A075B6N4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV25-1A0A075B6N4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV25-1A0A075B6N4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.34■□□□□ 0.53
TRBV25-1A0A075B6N4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.34■□□□□ 0.53
TRBV25-1A0A075B6N4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.34■□□□□ 0.53
TRBV25-1A0A075B6N4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.34■□□□□ 0.53
TRBV25-1A0A075B6N4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV25-1A0A075B6N4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV25-1A0A075B6N4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV25-1A0A075B6N4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV25-1A0A075B6N4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV25-1A0A075B6N4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV25-1A0A075B6N4 RARRES2P7-201ENST00000567349 469 ntBASIC18.32■□□□□ 0.52
TRBV25-1A0A075B6N4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV25-1A0A075B6N4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV25-1A0A075B6N4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV25-1A0A075B6N4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV25-1A0A075B6N4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV25-1A0A075B6N4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV25-1A0A075B6N4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV25-1A0A075B6N4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV25-1A0A075B6N4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.3■□□□□ 0.52
TRBV25-1A0A075B6N4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV25-1A0A075B6N4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRBV25-1A0A075B6N4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV25-1A0A075B6N4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV25-1A0A075B6N4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV25-1A0A075B6N4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV25-1A0A075B6N4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV25-1A0A075B6N4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV25-1A0A075B6N4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.29■□□□□ 0.52
TRBV25-1A0A075B6N4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.29■□□□□ 0.52
TRBV25-1A0A075B6N4 DRD5P2-201ENST00000421395 2012 ntBASIC18.28■□□□□ 0.52
TRBV25-1A0A075B6N4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV25-1A0A075B6N4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV25-1A0A075B6N4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TRBV25-1A0A075B6N4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms