Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 MIR6089-201ENST00000616698 64 ntBASIC13.97□□□□□ -0.17
VPS25Q9BRG1 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
VPS25Q9BRG1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS25Q9BRG1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
VPS25Q9BRG1 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS25Q9BRG1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS25Q9BRG1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.96□□□□□ -0.17
VPS25Q9BRG1 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VPS25Q9BRG1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS25Q9BRG1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC13.96□□□□□ -0.17
VPS25Q9BRG1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC13.96□□□□□ -0.17
VPS25Q9BRG1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC13.96□□□□□ -0.17
VPS25Q9BRG1 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
VPS25Q9BRG1 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS25Q9BRG1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS25Q9BRG1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS25Q9BRG1 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
VPS25Q9BRG1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS25Q9BRG1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS25Q9BRG1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
VPS25Q9BRG1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VPS25Q9BRG1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
VPS25Q9BRG1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC13.96□□□□□ -0.18
VPS25Q9BRG1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VPS25Q9BRG1 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
VPS25Q9BRG1 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
VPS25Q9BRG1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
VPS25Q9BRG1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 AC125437.2-201ENST00000625180 2167 ntBASIC13.95□□□□□ -0.18
VPS25Q9BRG1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms