RNA–Protein interactions for RNA: ENST00000374264.6

SUSD1-203, Transcript of sushi domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SUSD1, Length 2,754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-203ENST00000374264 NISCHQ9Y2I1 1504 aa43.88■■■■■ 4.62
SUSD1-203ENST00000374264 CCDC180Q9P1Z9 1646 aa37.45■■■■□ 3.58
SUSD1-203ENST00000374264 SHROOM4Q9ULL8 1493 aa37.36■■■■□ 3.57
SUSD1-203ENST00000374264 DCAF8L2P0C7V8 631 aa37.3■■■■□ 3.56
SUSD1-203ENST00000374264 ZCCHC6Q5VYS8 1495 aaKnown RBP36.89■■■■□ 3.5
SUSD1-203ENST00000374264 SUPT5HO00267 1087 aaKnown RBP36.28■■■■□ 3.4
SUSD1-203ENST00000374264 ABCC9O60706 1549 aa35.89■■■■□ 3.34
SUSD1-203ENST00000374264 DCAF1Q9Y4B6 1507 aa35.75■■■■□ 3.31
SUSD1-203ENST00000374264 SCRIBQ14160 1630 aa35.35■■■■□ 3.25
SUSD1-203ENST00000374264 MYO15BQ96JP2 1530 aa34.96■■■■□ 3.19
SUSD1-203ENST00000374264 NACADO15069 1562 aa34.91■■■■□ 3.18
SUSD1-203ENST00000374264 CHIC1Q5VXU3 224 aa34.63■■■■□ 3.13
SUSD1-203ENST00000374264 RB1CC1Q8TDY2 1594 aa34.59■■■■□ 3.13
SUSD1-203ENST00000374264 RSF1Q96T23 1441 aaPredicted RBP34.51■■■■□ 3.12
SUSD1-203ENST00000374264 CECR2Q9BXF3 1484 aa34.47■■■■□ 3.11
SUSD1-203ENST00000374264 PABPN1Q86U42 306 aaKnown RBP eCLIP34.34■■■■□ 3.09
SUSD1-203ENST00000374264 MROH2BQ7Z745 1585 aa34.19■■■■□ 3.06
SUSD1-203ENST00000374264 UNC13AQ9UPW8 1703 aa34.07■■■■□ 3.04
SUSD1-203ENST00000374264 WIZO95785 1651 aa33.97■■■■□ 3.03
SUSD1-203ENST00000374264 LOC105371045A0A1W2PR82 267 aa33.81■■■■□ 3
SUSD1-203ENST00000374264 BAZ1AQ9NRL2 1556 aaPredicted RBP33.73■■■□□ 2.99
SUSD1-203ENST00000374264 TRIM41Q8WV44 630 aa33.7■■■□□ 2.99
SUSD1-203ENST00000374264 BICRAQ9NZM4 1560 aa33.69■■■□□ 2.98
SUSD1-203ENST00000374264 FAM9AQ8IZU1 332 aaPredicted RBP33.65■■■□□ 2.98
SUSD1-203ENST00000374264 EHMT2Q96KQ7 1210 aa33.6■■■□□ 2.97
SUSD1-203ENST00000374264 SMARCA4P51532 1647 aa33.57■■■□□ 2.96
SUSD1-203ENST00000374264 CCDC88BA6NC98 1476 aa33.26■■■□□ 2.92
SUSD1-203ENST00000374264 TOP2AP11388 1531 aaKnown RBP33.25■■■□□ 2.91
SUSD1-203ENST00000374264 SMARCA2P51531 1590 aa33.11■■■□□ 2.89
SUSD1-203ENST00000374264 ABCC8Q09428 1581 aa33.02■■■□□ 2.88
SUSD1-203ENST00000374264 ATAD2BQ9ULI0 1458 aa32.97■■■□□ 2.87
SUSD1-203ENST00000374264 PCGF6Q9BYE7 350 aa32.95■■■□□ 2.87
SUSD1-203ENST00000374264 EIF4G1Q04637 1599 aaKnown RBP32.88■■■□□ 2.85
SUSD1-203ENST00000374264 BAZ1BQ9UIG0 1483 aaKnown RBP32.88■■■□□ 2.85
SUSD1-203ENST00000374264 PEG3Q9GZU2 1588 aa32.78■■■□□ 2.84
SUSD1-203ENST00000374264 SOGA1O94964 1423 aa32.58■■■□□ 2.81
SUSD1-203ENST00000374264 PPARGC1BQ86YN6 1023 aaKnown RBP32.53■■■□□ 2.8
SUSD1-203ENST00000374264 RUSC2Q8N2Y8 1516 aa32.48■■■□□ 2.79
SUSD1-203ENST00000374264 WRNQ14191 1432 aaPredicted RBP eCLIP32.47■■■□□ 2.79
SUSD1-203ENST00000374264 NCAPD3P42695 1498 aa32.38■■■□□ 2.77
SUSD1-203ENST00000374264 UBTFP17480 764 aaKnown RBP32.3■■■□□ 2.76
SUSD1-203ENST00000374264 CSRNP3Q8WYN3 585 aa32.3■■■□□ 2.76
SUSD1-203ENST00000374264 SYNJ1O43426 1573 aa32.3■■■□□ 2.76
SUSD1-203ENST00000374264 TRIM26Q12899 539 aaPredicted RBP32.25■■■□□ 2.75
SUSD1-203ENST00000374264 TTBK1Q5TCY1 1321 aaPredicted RBP32.24■■■□□ 2.75
SUSD1-203ENST00000374264 HMGXB3Q12766 1538 aa32.21■■■□□ 2.75
SUSD1-203ENST00000374264 RANGAP1P46060 587 aaPredicted RBP32.17■■■□□ 2.74
SUSD1-203ENST00000374264 CC2D2AQ9P2K1 1620 aa32.12■■■□□ 2.73
SUSD1-203ENST00000374264 HRCP23327 699 aa32.12■■■□□ 2.73
SUSD1-203ENST00000374264 CEP162Q5TB80 1403 aa31.95■■■□□ 2.71
SUSD1-203ENST00000374264 DNAJC5BQ9UF47 199 aa31.95■■■□□ 2.71
SUSD1-203ENST00000374264 CFTRP13569 1480 aa31.94■■■□□ 2.7
SUSD1-203ENST00000374264 EEA1Q15075 1411 aa31.93■■■□□ 2.7
SUSD1-203ENST00000374264 TNIKQ9UKE5 1360 aa31.86■■■□□ 2.69
SUSD1-203ENST00000374264 TOP2BQ02880 1626 aa31.85■■■□□ 2.69
SUSD1-203ENST00000374264 CUX1P39880 1505 aa31.84■■■□□ 2.69
SUSD1-203ENST00000374264 CADPSQ9ULU8 1353 aa31.83■■■□□ 2.69
SUSD1-203ENST00000374264 GOLGA3Q08378 1498 aa31.83■■■□□ 2.69
SUSD1-203ENST00000374264 RAPGEF2Q9Y4G8 1499 aa31.76■■■□□ 2.67
SUSD1-203ENST00000374264 CEP164Q9UPV0 1460 aa31.72■■■□□ 2.67
SUSD1-203ENST00000374264 NESP48681 1621 aa31.71■■■□□ 2.67
SUSD1-203ENST00000374264 BIVM-ERCC5R4GMW8 1640 aa31.68■■■□□ 2.66
SUSD1-203ENST00000374264 CLIP1P30622 1438 aa31.55■■■□□ 2.64
SUSD1-203ENST00000374264 KIF21BO75037 1637 aa31.54■■■□□ 2.64
SUSD1-203ENST00000374264 FANCD2Q9BXW9 1451 aa31.53■■■□□ 2.64
SUSD1-203ENST00000374264 KIF27Q86VH2 1401 aa31.51■■■□□ 2.64
SUSD1-203ENST00000374264 CUX2O14529 1486 aa31.47■■■□□ 2.63
SUSD1-203ENST00000374264 FGD5Q6ZNL6 1462 aa31.44■■■□□ 2.62
SUSD1-203ENST00000374264 PRDM2Q13029 1718 aa31.42■■■□□ 2.62
SUSD1-203ENST00000374264 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.41■■■□□ 2.62
SUSD1-203ENST00000374264 PRXQ9BXM0 1461 aa31.37■■■□□ 2.61
SUSD1-203ENST00000374264 RAD54L2Q9Y4B4 1467 aa31.34■■■□□ 2.61
SUSD1-203ENST00000374264 APLP2Q06481 763 aa31.32■■■□□ 2.6
SUSD1-203ENST00000374264 IGF1RP08069 1367 aa31.3■■■□□ 2.6
SUSD1-203ENST00000374264 VPS8Q8N3P4 1428 aa31.21■■■□□ 2.59
SUSD1-203ENST00000374264 TOPBP1Q92547 1522 aa31.2■■■□□ 2.59
SUSD1-203ENST00000374264 CCER1Q8TC90 406 aaPredicted RBP31.19■■■□□ 2.58
SUSD1-203ENST00000374264 CARMIL1Q5VZK9 1371 aa31.18■■■□□ 2.58
SUSD1-203ENST00000374264 HNRNPUL2Q1KMD3 747 aaKnown RBP31.17■■■□□ 2.58
SUSD1-203ENST00000374264 ERICH3Q5RHP9 1530 aa31.17■■■□□ 2.58
SUSD1-203ENST00000374264 POLA1P09884 1462 aaPredicted RBP31.17■■■□□ 2.58
SUSD1-203ENST00000374264 P3H3Q8IVL6 736 aa31.16■■■□□ 2.58
SUSD1-203ENST00000374264 DNMBPQ6XZF7 1577 aa31.11■■■□□ 2.57
SUSD1-203ENST00000374264 URB2Q14146 1524 aaKnown RBP31.1■■■□□ 2.57
SUSD1-203ENST00000374264 TDRD9Q8NDG6 1382 aaKnown RBP31.1■■■□□ 2.57
SUSD1-203ENST00000374264 LAMC3Q9Y6N6 1575 aa31.08■■■□□ 2.57
SUSD1-203ENST00000374264 ARAP1Q96P48 1450 aa31.07■■■□□ 2.56
SUSD1-203ENST00000374264 PDS5BQ9NTI5 1447 aa31.05■■■□□ 2.56
SUSD1-203ENST00000374264 KANK4Q5T7N3 995 aaPredicted RBP31.04■■■□□ 2.56
SUSD1-203ENST00000374264 ZEB1P37275 1124 aaPredicted RBP31.02■■■□□ 2.56
SUSD1-203ENST00000374264 ATP1B4Q9UN42 357 aaPredicted RBP31.01■■■□□ 2.56
SUSD1-203ENST00000374264 KIF21AQ7Z4S6 1674 aa30.98■■■□□ 2.55
SUSD1-203ENST00000374264 ARHGAP35Q9NRY4 1499 aa30.95■■■□□ 2.55
SUSD1-203ENST00000374264 ABCA10Q8WWZ4 1543 aa30.92■■■□□ 2.54
SUSD1-203ENST00000374264 ITGAEP38570 1179 aa30.77■■■□□ 2.52
SUSD1-203ENST00000374264 GAPVD1Q14C86 1478 aa30.74■■■□□ 2.51
SUSD1-203ENST00000374264 AQRO60306 1485 aaKnown RBP eCLIP30.72■■■□□ 2.511e-7■■■□□ 15.2
SUSD1-203ENST00000374264 FHOD3Q2V2M9 1422 aa30.7■■■□□ 2.51
SUSD1-203ENST00000374264 WDR97A6NE52 1622 aa30.59■■■□□ 2.49
SUSD1-203ENST00000374264 MRC2Q9UBG0 1479 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms