RNA–Protein interactions for RNA: ENST00000407142.5

PPM1F-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PPM1F, Length 5,587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-203ENST00000407142 DCAF8L2P0C7V8 631 aa26.8■■□□□ 1.88
PPM1F-203ENST00000407142 NISCHQ9Y2I1 1504 aa25.58■■□□□ 1.69
PPM1F-203ENST00000407142 SUPT5HO00267 1087 aaKnown RBP24.96■■□□□ 1.59
PPM1F-203ENST00000407142 SHROOM4Q9ULL8 1493 aa24.62■■□□□ 1.53
PPM1F-203ENST00000407142 PELP1Q8IZL8 1130 aaKnown RBP24.47■■□□□ 1.51
PPM1F-203ENST00000407142 FAM9AQ8IZU1 332 aaPredicted RBP24.12■■□□□ 1.45
PPM1F-203ENST00000407142 EHMT2Q96KQ7 1210 aa24.09■■□□□ 1.45
PPM1F-203ENST00000407142 APLP2Q06481 763 aa24.04■■□□□ 1.44
PPM1F-203ENST00000407142 ERICH6Q7L0X2 663 aa23.49■■□□□ 1.35
PPM1F-203ENST00000407142 CENPBP07199 599 aaPredicted RBP23.43■■□□□ 1.34
PPM1F-203ENST00000407142 PCGF6Q9BYE7 350 aa23.37■■□□□ 1.33
PPM1F-203ENST00000407142 CCER1Q8TC90 406 aaPredicted RBP23.33■■□□□ 1.33
PPM1F-203ENST00000407142 RANGAP1P46060 587 aaPredicted RBP23.28■■□□□ 1.32
PPM1F-203ENST00000407142 MYT1Q01538 1121 aa23.27■■□□□ 1.31
PPM1F-203ENST00000407142 TRIM41Q8WV44 630 aa23.27■■□□□ 1.31
PPM1F-203ENST00000407142 ATP1B4Q9UN42 357 aaPredicted RBP23.25■■□□□ 1.31
PPM1F-203ENST00000407142 TTBK1Q5TCY1 1321 aaPredicted RBP23.23■■□□□ 1.31
PPM1F-203ENST00000407142 ZEB1P37275 1124 aaPredicted RBP23.19■■□□□ 1.3
PPM1F-203ENST00000407142 UBTFP17480 764 aaKnown RBP23.06■■□□□ 1.28
PPM1F-203ENST00000407142 NEFLP07196 543 aa22.87■■□□□ 1.25
PPM1F-203ENST00000407142 YTHDC1Q96MU7 727 aaKnown RBP22.76■■□□□ 1.23
PPM1F-203ENST00000407142 MYT1LQ9UL68 1186 aa22.62■■□□□ 1.21
PPM1F-203ENST00000407142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.59■■□□□ 1.21
PPM1F-203ENST00000407142 HNRNPUL2Q1KMD3 747 aaKnown RBP22.59■■□□□ 1.21
PPM1F-203ENST00000407142 ABCC9O60706 1549 aa22.44■■□□□ 1.18
PPM1F-203ENST00000407142 DAXXQ9UER7 740 aaPredicted RBP22.3■■□□□ 1.16
PPM1F-203ENST00000407142 PABPN1Q86U42 306 aaKnown RBP eCLIP22.28■■□□□ 1.16
PPM1F-203ENST00000407142 TRIM26Q12899 539 aaPredicted RBP22.26■■□□□ 1.15
PPM1F-203ENST00000407142 HRCP23327 699 aa22.25■■□□□ 1.15
PPM1F-203ENST00000407142 PPARGC1BQ86YN6 1023 aaKnown RBP22.21■■□□□ 1.15
PPM1F-203ENST00000407142 ITGAEP38570 1179 aa22.2■■□□□ 1.14
PPM1F-203ENST00000407142 POLR3GLQ9BT43 218 aa22.03■■□□□ 1.12
PPM1F-203ENST00000407142 CHIC1Q5VXU3 224 aa22■■□□□ 1.11
PPM1F-203ENST00000407142 RTL5Q5HYW3 569 aaPredicted RBP21.93■■□□□ 1.1
PPM1F-203ENST00000407142 FBLN2P98095 1184 aa21.85■■□□□ 1.09
PPM1F-203ENST00000407142 SLC4A1APQ9BWU0 796 aaKnown RBP21.83■■□□□ 1.08
PPM1F-203ENST00000407142 LOC105371045A0A1W2PR82 267 aa21.81■■□□□ 1.08
PPM1F-203ENST00000407142 ZNF316A6NFI3 1004 aaPredicted RBP21.78■■□□□ 1.08
PPM1F-203ENST00000407142 FAM50AQ14320 339 aaKnown RBP21.77■■□□□ 1.07
PPM1F-203ENST00000407142 DIEXFQ68CQ4 756 aaKnown RBP21.71■■□□□ 1.07
PPM1F-203ENST00000407142 TRIM52Q96A61 297 aa21.69■■□□□ 1.06
PPM1F-203ENST00000407142 CNGB1Q14028 1251 aaPredicted RBP21.68■■□□□ 1.06
PPM1F-203ENST00000407142 CLSPNQ9HAW4 1339 aa21.63■■□□□ 1.05
PPM1F-203ENST00000407142 GTF3C3Q9Y5Q9 886 aa21.49■■□□□ 1.03
PPM1F-203ENST00000407142 BCANQ96GW7 911 aa21.44■■□□□ 1.02
PPM1F-203ENST00000407142 SCRIBQ14160 1630 aa21.41■■□□□ 1.02
PPM1F-203ENST00000407142 CDK11AQ9UQ88 783 aaPredicted RBP21.38■■□□□ 1.01
PPM1F-203ENST00000407142 NEUROD1Q13562 356 aa21.36■■□□□ 1.01
PPM1F-203ENST00000407142 ZNF326Q5BKZ1 582 aaKnown RBP21.34■■□□□ 1.01
PPM1F-203ENST00000407142 ESF1Q9H501 851 aaKnown RBP21.33■■□□□ 1.01
PPM1F-203ENST00000407142 P3H3Q8IVL6 736 aa21.33■■□□□ 1
PPM1F-203ENST00000407142 NPM1P06748 294 aaKnown RBP eCLIP21.32■■□□□ 1
PPM1F-203ENST00000407142 ARID3CA6NKF2 412 aa21.31■■□□□ 1
PPM1F-203ENST00000407142 CSRNP3Q8WYN3 585 aa21.28■■□□□ 1
PPM1F-203ENST00000407142 ZNF777Q9ULD5 760 aaPredicted RBP21.26■□□□□ 0.99
PPM1F-203ENST00000407142 ANP32CO43423 234 aa21.22■□□□□ 0.99
PPM1F-203ENST00000407142 NEFMP07197 916 aa21.15■□□□□ 0.98
PPM1F-203ENST00000407142 ACIN1Q9UKV3 1341 aaKnown RBP21.13■□□□□ 0.97
PPM1F-203ENST00000407142 CCDC180Q9P1Z9 1646 aa21.11■□□□□ 0.97
PPM1F-203ENST00000407142 ZBTB47Q9UFB7 747 aaPredicted RBP21.1■□□□□ 0.97
PPM1F-203ENST00000407142 ZCCHC6Q5VYS8 1495 aaKnown RBP21.1■□□□□ 0.97
PPM1F-203ENST00000407142 STAG3Q9UJ98 1225 aa21.08■□□□□ 0.97
PPM1F-203ENST00000407142 SLC24A1O60721 1099 aa21.08■□□□□ 0.96
PPM1F-203ENST00000407142 ANP32AP39687 249 aaKnown RBP21.06■□□□□ 0.96
PPM1F-203ENST00000407142 RB1CC1Q8TDY2 1594 aa21.04■□□□□ 0.96
PPM1F-203ENST00000407142 CHGAP10645 457 aaKnown RBP20.97■□□□□ 0.95
PPM1F-203ENST00000407142 CHMP7Q8WUX9 453 aaPredicted RBP20.97■□□□□ 0.95
PPM1F-203ENST00000407142 CANXP27824 592 aaKnown RBP20.97■□□□□ 0.95
PPM1F-203ENST00000407142 PLPPR3Q6T4P5 718 aa20.95■□□□□ 0.94
PPM1F-203ENST00000407142 EIF5BO60841 1220 aaKnown RBP20.95■□□□□ 0.94
PPM1F-203ENST00000407142 NPM2Q86SE8 214 aaKnown RBP20.88■□□□□ 0.93
PPM1F-203ENST00000407142 BCL11AQ9H165 835 aa20.82■□□□□ 0.92
PPM1F-203ENST00000407142 ANP32BQ92688 251 aaKnown RBP20.8■□□□□ 0.92
PPM1F-203ENST00000407142 TSPY4P0CV99 314 aa20.79■□□□□ 0.92
PPM1F-203ENST00000407142 TSPY10P0CW01 314 aa20.79■□□□□ 0.92
PPM1F-203ENST00000407142 GLIPR1L2Q4G1C9 344 aa20.79■□□□□ 0.92
PPM1F-203ENST00000407142 FKBP8Q14318 412 aa20.76■□□□□ 0.91
PPM1F-203ENST00000407142 TONSLQ96HA7 1378 aa20.76■□□□□ 0.91
PPM1F-203ENST00000407142 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.75■□□□□ 0.91
PPM1F-203ENST00000407142 NACADO15069 1562 aa20.73■□□□□ 0.91
PPM1F-203ENST00000407142 MTUS2Q5JR59 1369 aa20.71■□□□□ 0.91
PPM1F-203ENST00000407142 CHIC2Q9UKJ5 165 aa20.67■□□□□ 0.9
PPM1F-203ENST00000407142 BAZ1BQ9UIG0 1483 aaKnown RBP20.63■□□□□ 0.89
PPM1F-203ENST00000407142 HSP90AA1P07900 732 aaKnown RBP20.63■□□□□ 0.89
PPM1F-203ENST00000407142 ERCC6Q03468 1493 aa20.62■□□□□ 0.89
PPM1F-203ENST00000407142 PLEKHD1A6NEE1 506 aa20.6■□□□□ 0.89
PPM1F-203ENST00000407142 UPF2Q9HAU5 1272 aaKnown RBP20.6■□□□□ 0.89
PPM1F-203ENST00000407142 KCNH8Q96L42 1107 aa20.58■□□□□ 0.89
PPM1F-203ENST00000407142 NBR1Q14596 966 aa20.56■□□□□ 0.88
PPM1F-203ENST00000407142 HNRNPUQ00839 825 aaKnown RBP eCLIP20.55■□□□□ 0.88
PPM1F-203ENST00000407142 RSF1Q96T23 1441 aaPredicted RBP20.54■□□□□ 0.88
PPM1F-203ENST00000407142 PPP1R15AO75807 674 aaPredicted RBP20.53■□□□□ 0.88
PPM1F-203ENST00000407142 SCAF1Q9H7N4 1312 aaKnown RBP20.52■□□□□ 0.88
PPM1F-203ENST00000407142 CLIP1P30622 1438 aa20.5■□□□□ 0.87
PPM1F-203ENST00000407142 EEA1Q15075 1411 aa20.49■□□□□ 0.87
PPM1F-203ENST00000407142 ARID4BQ4LE39 1312 aaPredicted RBP20.48■□□□□ 0.87
PPM1F-203ENST00000407142 KDM2AQ9Y2K7 1162 aa20.45■□□□□ 0.86
PPM1F-203ENST00000407142 CCDC136Q96JN2 1154 aa20.45■□□□□ 0.86
PPM1F-203ENST00000407142 FAM9BQ8IZU0 186 aa20.44■□□□□ 0.86
PPM1F-203ENST00000407142 C14orf37Q86TY3 774 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms