RNA–Protein interactions for RNA: ENST00000379109.7

PAX6-203, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PAX6, Length 3,182 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-203ENST00000379109 NISCHQ9Y2I1 1504 aa27.55■■■□□ 2
PAX6-203ENST00000379109 HRCP23327 699 aa26.81■■□□□ 1.88
PAX6-203ENST00000379109 PELP1Q8IZL8 1130 aaKnown RBP26.81■■□□□ 1.88
PAX6-203ENST00000379109 PPARGC1BQ86YN6 1023 aaKnown RBP26.48■■□□□ 1.83
PAX6-203ENST00000379109 PCGF6Q9BYE7 350 aa26.19■■□□□ 1.78
PAX6-203ENST00000379109 MYT1Q01538 1121 aa25.91■■□□□ 1.74
PAX6-203ENST00000379109 SCAF1Q9H7N4 1312 aaKnown RBP25.82■■□□□ 1.72
PAX6-203ENST00000379109 SUPT5HO00267 1087 aaKnown RBP25.54■■□□□ 1.68
PAX6-203ENST00000379109 SHROOM4Q9ULL8 1493 aa25.28■■□□□ 1.64
PAX6-203ENST00000379109 MYO15BQ96JP2 1530 aa25.25■■□□□ 1.63
PAX6-203ENST00000379109 CHIC1Q5VXU3 224 aa25.05■■□□□ 1.6
PAX6-203ENST00000379109 ACIN1Q9UKV3 1341 aaKnown RBP24.95■■□□□ 1.58
PAX6-203ENST00000379109 NEUROD1Q13562 356 aa24.93■■□□□ 1.58
PAX6-203ENST00000379109 TRIM26Q12899 539 aaPredicted RBP24.92■■□□□ 1.58
PAX6-203ENST00000379109 GTF3C3Q9Y5Q9 886 aa24.92■■□□□ 1.58
PAX6-203ENST00000379109 ZEB1P37275 1124 aaPredicted RBP24.89■■□□□ 1.57
PAX6-203ENST00000379109 LOC105371045A0A1W2PR82 267 aa24.78■■□□□ 1.56
PAX6-203ENST00000379109 DCAF1Q9Y4B6 1507 aa24.7■■□□□ 1.55
PAX6-203ENST00000379109 CENPBP07199 599 aaPredicted RBP24.61■■□□□ 1.53
PAX6-203ENST00000379109 CCDC180Q9P1Z9 1646 aa24.44■■□□□ 1.5
PAX6-203ENST00000379109 BCL11AQ9H165 835 aa24.39■■□□□ 1.5
PAX6-203ENST00000379109 TTBK1Q5TCY1 1321 aaPredicted RBP24.39■■□□□ 1.49
PAX6-203ENST00000379109 DIEXFQ68CQ4 756 aaKnown RBP24.24■■□□□ 1.47
PAX6-203ENST00000379109 FAM9AQ8IZU1 332 aaPredicted RBP24.19■■□□□ 1.46
PAX6-203ENST00000379109 YTHDC1Q96MU7 727 aaKnown RBP24.19■■□□□ 1.46
PAX6-203ENST00000379109 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.03■■□□□ 1.44
PAX6-203ENST00000379109 CCER1Q8TC90 406 aaPredicted RBP24■■□□□ 1.43
PAX6-203ENST00000379109 ANP32EQ9BTT0 268 aa23.89■■□□□ 1.42
PAX6-203ENST00000379109 PRKCSHP14314 528 aaPredicted RBP23.88■■□□□ 1.41
PAX6-203ENST00000379109 EHMT2Q96KQ7 1210 aa23.86■■□□□ 1.41
PAX6-203ENST00000379109 DCAF8L2P0C7V8 631 aa23.76■■□□□ 1.39
PAX6-203ENST00000379109 CSRNP3Q8WYN3 585 aa23.76■■□□□ 1.39
PAX6-203ENST00000379109 TRIM41Q8WV44 630 aa23.58■■□□□ 1.37
PAX6-203ENST00000379109 MIER1Q8N108 512 aa23.56■■□□□ 1.36
PAX6-203ENST00000379109 ZNF316A6NFI3 1004 aaPredicted RBP23.52■■□□□ 1.36
PAX6-203ENST00000379109 TSHZ2Q9NRE2 1034 aa23.52■■□□□ 1.36
PAX6-203ENST00000379109 SUPT16HQ9Y5B9 1047 aaKnown RBP23.44■■□□□ 1.34
PAX6-203ENST00000379109 ERICH6Q7L0X2 663 aa23.25■■□□□ 1.31
PAX6-203ENST00000379109 ZCCHC6Q5VYS8 1495 aaKnown RBP23.17■■□□□ 1.3
PAX6-203ENST00000379109 BCANQ96GW7 911 aa23.15■■□□□ 1.3
PAX6-203ENST00000379109 CLSPNQ9HAW4 1339 aa23.09■■□□□ 1.29
PAX6-203ENST00000379109 RBM19Q9Y4C8 960 aaKnown RBP22.94■■□□□ 1.26
PAX6-203ENST00000379109 ANO8Q9HCE9 1232 aaPredicted RBP22.9■■□□□ 1.26
PAX6-203ENST00000379109 APLP2Q06481 763 aa22.84■■□□□ 1.25
PAX6-203ENST00000379109 FKBP8Q14318 412 aa22.81■■□□□ 1.24
PAX6-203ENST00000379109 MSH5O43196 834 aa22.77■■□□□ 1.23
PAX6-203ENST00000379109 ITGAEP38570 1179 aa22.74■■□□□ 1.23
PAX6-203ENST00000379109 HNRNPUL2Q1KMD3 747 aaKnown RBP22.72■■□□□ 1.23
PAX6-203ENST00000379109 DEKP35659 375 aaKnown RBP22.65■■□□□ 1.22
PAX6-203ENST00000379109 NEFLP07196 543 aa22.6■■□□□ 1.21
PAX6-203ENST00000379109 CCDC136Q96JN2 1154 aa22.6■■□□□ 1.21
PAX6-203ENST00000379109 SALL2Q9Y467 1007 aaPredicted RBP22.58■■□□□ 1.2
PAX6-203ENST00000379109 KCNH8Q96L42 1107 aa22.57■■□□□ 1.2
PAX6-203ENST00000379109 ABCC9O60706 1549 aa22.51■■□□□ 1.19
PAX6-203ENST00000379109 MYT1LQ9UL68 1186 aa22.42■■□□□ 1.18
PAX6-203ENST00000379109 NBR1Q14596 966 aa22.38■■□□□ 1.17
PAX6-203ENST00000379109 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.36■■□□□ 1.17
PAX6-203ENST00000379109 FANCIQ9NVI1 1328 aa22.35■■□□□ 1.17
PAX6-203ENST00000379109 RTN4Q9NQC3 1192 aaKnown RBP22.35■■□□□ 1.17
PAX6-203ENST00000379109 CDK11AQ9UQ88 783 aaPredicted RBP22.31■■□□□ 1.16
PAX6-203ENST00000379109 SCRIBQ14160 1630 aa22.28■■□□□ 1.16
PAX6-203ENST00000379109 TRIM52Q96A61 297 aa22.28■■□□□ 1.16
PAX6-203ENST00000379109 WRNQ14191 1432 aaPredicted RBP eCLIP22.26■■□□□ 1.15
PAX6-203ENST00000379109 RSF1Q96T23 1441 aaPredicted RBP22.24■■□□□ 1.15
PAX6-203ENST00000379109 RB1CC1Q8TDY2 1594 aa22.24■■□□□ 1.15
PAX6-203ENST00000379109 CEP162Q5TB80 1403 aa22.23■■□□□ 1.15
PAX6-203ENST00000379109 UBTFP17480 764 aaKnown RBP22.22■■□□□ 1.15
PAX6-203ENST00000379109 UBE2Q2Q8WVN8 375 aa22.21■■□□□ 1.15
PAX6-203ENST00000379109 IRX6P78412 446 aaPredicted RBP22.2■■□□□ 1.14
PAX6-203ENST00000379109 IL27Q8NEV9 243 aa22.2■■□□□ 1.14
PAX6-203ENST00000379109 ERICH6BQ5W0A0 696 aa22.2■■□□□ 1.14
PAX6-203ENST00000379109 DDX10Q13206 875 aaKnown RBP22.09■■□□□ 1.13
PAX6-203ENST00000379109 RTL5Q5HYW3 569 aaPredicted RBP22.07■■□□□ 1.12
PAX6-203ENST00000379109 EIF5BO60841 1220 aaKnown RBP22.06■■□□□ 1.12
PAX6-203ENST00000379109 NOP58Q9Y2X3 529 aaKnown RBP22.04■■□□□ 1.12
PAX6-203ENST00000379109 PAK3O75914 559 aaPredicted RBP22.02■■□□□ 1.12
PAX6-203ENST00000379109 TNIKQ9UKE5 1360 aa21.93■■□□□ 1.1
PAX6-203ENST00000379109 DHX57Q6P158 1386 aaKnown RBP21.91■■□□□ 1.1
PAX6-203ENST00000379109 RANGAP1P46060 587 aaPredicted RBP21.88■■□□□ 1.09
PAX6-203ENST00000379109 HIRIP3Q9BW71 556 aaPredicted RBP21.83■■□□□ 1.09
PAX6-203ENST00000379109 ANP32CO43423 234 aa21.82■■□□□ 1.08
PAX6-203ENST00000379109 B4GALNT3Q6L9W6 998 aa21.81■■□□□ 1.08
PAX6-203ENST00000379109 PKNOX2Q96KN3 472 aa21.79■■□□□ 1.08
PAX6-203ENST00000379109 HNRNPUQ00839 825 aaKnown RBP eCLIP21.79■■□□□ 1.08
PAX6-203ENST00000379109 CECR2Q9BXF3 1484 aa21.76■■□□□ 1.07
PAX6-203ENST00000379109 PPP4R2Q9NY27 417 aa21.75■■□□□ 1.07
PAX6-203ENST00000379109 SOGA1O94964 1423 aa21.75■■□□□ 1.07
PAX6-203ENST00000379109 ZBTB47Q9UFB7 747 aaPredicted RBP21.75■■□□□ 1.07
PAX6-203ENST00000379109 NACADO15069 1562 aa21.74■■□□□ 1.07
PAX6-203ENST00000379109 ANP32AP39687 249 aaKnown RBP21.73■■□□□ 1.07
PAX6-203ENST00000379109 CCDC88BA6NC98 1476 aa21.7■■□□□ 1.06
PAX6-203ENST00000379109 CCER2I3L3R5 266 aa21.69■■□□□ 1.06
PAX6-203ENST00000379109 ABCC8Q09428 1581 aa21.69■■□□□ 1.06
PAX6-203ENST00000379109 PABPN1Q86U42 306 aaKnown RBP eCLIP21.66■■□□□ 1.06
PAX6-203ENST00000379109 TIMELESSQ9UNS1 1208 aa21.65■■□□□ 1.06
PAX6-203ENST00000379109 IPO9Q96P70 1041 aaKnown RBP21.65■■□□□ 1.06
PAX6-203ENST00000379109 PPP1R15AO75807 674 aaPredicted RBP21.64■■□□□ 1.05
PAX6-203ENST00000379109 BRPF3Q9ULD4 1205 aa21.62■■□□□ 1.05
PAX6-203ENST00000379109 LAS1LQ9Y4W2 734 aaKnown RBP21.62■■□□□ 1.05
PAX6-203ENST00000379109 NEFMP07197 916 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms