RNA–Protein interactions for RNA: ENST00000544817.5

BRSK2-215, Transcript of BR serine/threonine kinase 2, human

TSL 1 (best) BASIC

Gene BRSK2, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRSK2-215	ENST00000544817	NISCH	Q9Y2I1	1504 aa		45.75	■■■■■ 4.91
BRSK2-215	ENST00000544817	CCDC180	Q9P1Z9	1646 aa		40.16	■■■■■ 4.02
BRSK2-215	ENST00000544817	ZCCHC6	Q5VYS8	1495 aa	Known RBP	38.34	■■■■□ 3.73
BRSK2-215	ENST00000544817	ABCC9	O60706	1549 aa		38.24	■■■■□ 3.71
BRSK2-215	ENST00000544817	DCAF1	Q9Y4B6	1507 aa		37.88	■■■■□ 3.65
BRSK2-215	ENST00000544817	DCAF8L2	P0C7V8	631 aa		37.85	■■■■□ 3.65
BRSK2-215	ENST00000544817	MYO15B	Q96JP2	1530 aa		37.61	■■■■□ 3.61
BRSK2-215	ENST00000544817	NACAD	O15069	1562 aa		37.49	■■■■□ 3.59
BRSK2-215	ENST00000544817	RB1CC1	Q8TDY2	1594 aa		37.27	■■■■□ 3.56
BRSK2-215	ENST00000544817	SHROOM4	Q9ULL8	1493 aa		36.9	■■■■□ 3.5
BRSK2-215	ENST00000544817	SCRIB	Q14160	1630 aa		36.77	■■■■□ 3.48
BRSK2-215	ENST00000544817	UNC13A	Q9UPW8	1703 aa		36.47	■■■■□ 3.43
BRSK2-215	ENST00000544817	BICRA	Q9NZM4	1560 aa		36.08	■■■■□ 3.37
BRSK2-215	ENST00000544817	PABPN1	Q86U42	306 aa	Known RBP eCLIP	35.94	■■■■□ 3.34
BRSK2-215	ENST00000544817	CECR2	Q9BXF3	1484 aa		35.52	■■■■□ 3.28
BRSK2-215	ENST00000544817	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	35.39	■■■■□ 3.26
BRSK2-215	ENST00000544817	SUPT5H	O00267	1087 aa	Known RBP	35.32	■■■■□ 3.25
BRSK2-215	ENST00000544817	RSF1	Q96T23	1441 aa	Predicted RBP	35.29	■■■■□ 3.24
BRSK2-215	ENST00000544817	MROH2B	Q7Z745	1585 aa		35.29	■■■■□ 3.24
BRSK2-215	ENST00000544817	SMARCA4	P51532	1647 aa		35.26	■■■■□ 3.24
BRSK2-215	ENST00000544817	EIF4G1	Q04637	1599 aa	Known RBP	35.05	■■■■□ 3.2
BRSK2-215	ENST00000544817	WIZ	O95785	1651 aa		34.99	■■■■□ 3.19
BRSK2-215	ENST00000544817	PEG3	Q9GZU2	1588 aa		34.88	■■■■□ 3.17
BRSK2-215	ENST00000544817	SMARCA2	P51531	1590 aa		34.79	■■■■□ 3.16
BRSK2-215	ENST00000544817	ATAD2B	Q9ULI0	1458 aa		34.77	■■■■□ 3.16
BRSK2-215	ENST00000544817	TOP2A	P11388	1531 aa	Known RBP	34.65	■■■■□ 3.14
BRSK2-215	ENST00000544817	CC2D2A	Q9P2K1	1620 aa		34.64	■■■■□ 3.14
BRSK2-215	ENST00000544817	NCAPD3	P42695	1498 aa		34.57	■■■■□ 3.13
BRSK2-215	ENST00000544817	BAZ1B	Q9UIG0	1483 aa	Known RBP	34.57	■■■■□ 3.13
BRSK2-215	ENST00000544817	HMGXB3	Q12766	1538 aa		34.51	■■■■□ 3.11
BRSK2-215	ENST00000544817	CCDC88B	A6NC98	1476 aa		34.25	■■■■□ 3.07
BRSK2-215	ENST00000544817	DNAJC5B	Q9UF47	199 aa		34.04	■■■■□ 3.04
BRSK2-215	ENST00000544817	CFTR	P13569	1480 aa		33.68	■■■□□ 2.98
BRSK2-215	ENST00000544817	CADPS	Q9ULU8	1353 aa		33.65	■■■□□ 2.98
BRSK2-215	ENST00000544817	CHIC1	Q5VXU3	224 aa		33.61	■■■□□ 2.97
BRSK2-215	ENST00000544817	PRDM2	Q13029	1718 aa		33.54	■■■□□ 2.96
BRSK2-215	ENST00000544817	LAMC3	Q9Y6N6	1575 aa		33.5	■■■□□ 2.95
BRSK2-215	ENST00000544817	NES	P48681	1621 aa		33.42	■■■□□ 2.94
BRSK2-215	ENST00000544817	ABCC8	Q09428	1581 aa		33.37	■■■□□ 2.93
BRSK2-215	ENST00000544817	TRIM41	Q8WV44	630 aa		33.31	■■■□□ 2.92
BRSK2-215	ENST00000544817	FANCD2	Q9BXW9	1451 aa		33.26	■■■□□ 2.92
BRSK2-215	ENST00000544817	WRN	Q14191	1432 aa	Predicted RBP eCLIP	33.25	■■■□□ 2.91
BRSK2-215	ENST00000544817	PDS5B	Q9NTI5	1447 aa		33.24	■■■□□ 2.91
BRSK2-215	ENST00000544817	CEP164	Q9UPV0	1460 aa		33.12	■■■□□ 2.89
BRSK2-215	ENST00000544817	SYNJ1	O43426	1573 aa		33.11	■■■□□ 2.89
BRSK2-215	ENST00000544817	KIF21A	Q7Z4S6	1674 aa		33.07	■■■□□ 2.88
BRSK2-215	ENST00000544817	TOP2B	Q02880	1626 aa		33.06	■■■□□ 2.88
BRSK2-215	ENST00000544817	BIVM-ERCC5	R4GMW8	1640 aa		33.04	■■■□□ 2.88
BRSK2-215	ENST00000544817	CUX1	P39880	1505 aa		33.03	■■■□□ 2.88
BRSK2-215	ENST00000544817	DNMBP	Q6XZF7	1577 aa		32.92	■■■□□ 2.86
BRSK2-215	ENST00000544817	ERCC6	Q03468	1493 aa		32.88	■■■□□ 2.85
BRSK2-215	ENST00000544817	TOPBP1	Q92547	1522 aa		32.86	■■■□□ 2.85
BRSK2-215	ENST00000544817	URB2	Q14146	1524 aa	Known RBP	32.85	■■■□□ 2.85
BRSK2-215	ENST00000544817	MRC2	Q9UBG0	1479 aa		32.81	■■■□□ 2.84
BRSK2-215	ENST00000544817	FGD5	Q6ZNL6	1462 aa		32.74	■■■□□ 2.83
BRSK2-215	ENST00000544817	WDR62	O43379	1518 aa		32.66	■■■□□ 2.82
BRSK2-215	ENST00000544817	POLA1	P09884	1462 aa	Predicted RBP	32.65	■■■□□ 2.82
BRSK2-215	ENST00000544817	THOC2	Q8NI27	1593 aa	Known RBP	32.65	■■■□□ 2.82
BRSK2-215	ENST00000544817	SOGA1	O94964	1423 aa		32.65	■■■□□ 2.82
BRSK2-215	ENST00000544817	EEA1	Q15075	1411 aa		32.61	■■■□□ 2.81
BRSK2-215	ENST00000544817	FAM9A	Q8IZU1	332 aa	Predicted RBP	32.61	■■■□□ 2.81
BRSK2-215	ENST00000544817	RUSC2	Q8N2Y8	1516 aa		32.53	■■■□□ 2.8
BRSK2-215	ENST00000544817	RAD54L2	Q9Y4B4	1467 aa		32.51	■■■□□ 2.79
BRSK2-215	ENST00000544817	ABCA10	Q8WWZ4	1543 aa		32.48	■■■□□ 2.79
BRSK2-215	ENST00000544817	KIF27	Q86VH2	1401 aa		32.47	■■■□□ 2.79
BRSK2-215	ENST00000544817	CUX2	O14529	1486 aa		32.45	■■■□□ 2.79
BRSK2-215	ENST00000544817	CSRNP3	Q8WYN3	585 aa		32.42	■■■□□ 2.78
BRSK2-215	ENST00000544817	WDR97	A6NE52	1622 aa		32.41	■■■□□ 2.78
BRSK2-215	ENST00000544817	TARBP1	Q13395	1621 aa	Known RBP	32.41	■■■□□ 2.78
BRSK2-215	ENST00000544817	IFT140	Q96RY7	1462 aa		32.36	■■■□□ 2.77
BRSK2-215	ENST00000544817	LOC105371045	A0A1W2PR82	267 aa		32.26	■■■□□ 2.75
BRSK2-215	ENST00000544817	ABCA5	Q8WWZ7	1642 aa		32.25	■■■□□ 2.75
BRSK2-215	ENST00000544817	TDRD9	Q8NDG6	1382 aa	Known RBP	32.24	■■■□□ 2.75
BRSK2-215	ENST00000544817	GAPVD1	Q14C86	1478 aa		32.2	■■■□□ 2.75
BRSK2-215	ENST00000544817	IGF1R	P08069	1367 aa		32.19	■■■□□ 2.74
BRSK2-215	ENST00000544817	KIF21B	O75037	1637 aa		32.18	■■■□□ 2.74
BRSK2-215	ENST00000544817	ZNF608	Q9ULD9	1512 aa	Predicted RBP	32.13	■■■□□ 2.73
BRSK2-215	ENST00000544817	PRX	Q9BXM0	1461 aa		32.12	■■■□□ 2.73
BRSK2-215	ENST00000544817	ERICH3	Q5RHP9	1530 aa		32.11	■■■□□ 2.73
BRSK2-215	ENST00000544817	AQR	O60306	1485 aa	Known RBP eCLIP	32.11	■■■□□ 2.73
BRSK2-215	ENST00000544817	EHMT2	Q96KQ7	1210 aa		32.11	■■■□□ 2.73
BRSK2-215	ENST00000544817	GOLGA3	Q08378	1498 aa		32.1	■■■□□ 2.73
BRSK2-215	ENST00000544817	PBRM1	Q86U86	1689 aa		32.07	■■■□□ 2.72
BRSK2-215	ENST00000544817	EIF4G3	O43432	1585 aa	Known RBP	32.06	■■■□□ 2.72
BRSK2-215	ENST00000544817	CUL7	Q14999	1698 aa		32.06	■■■□□ 2.72
BRSK2-215	ENST00000544817	CARMIL1	Q5VZK9	1371 aa		32.03	■■■□□ 2.72
BRSK2-215	ENST00000544817	GRIN2B	Q13224	1484 aa		32.02	■■■□□ 2.72
BRSK2-215	ENST00000544817	RAPGEF2	Q9Y4G8	1499 aa		32.02	■■■□□ 2.72
BRSK2-215	ENST00000544817	UBTF	P17480	764 aa	Known RBP	31.96	■■■□□ 2.71
BRSK2-215	ENST00000544817	TNIK	Q9UKE5	1360 aa		31.91	■■■□□ 2.7
BRSK2-215	ENST00000544817	FHAD1	B1AJZ9	1412 aa		31.85	■■■□□ 2.69
BRSK2-215	ENST00000544817	ADAMTS12	P58397	1594 aa		31.85	■■■□□ 2.69
BRSK2-215	ENST00000544817	SNAPC4	Q5SXM2	1469 aa		31.83	■■■□□ 2.69
BRSK2-215	ENST00000544817	MAGI1	Q96QZ7	1491 aa	Predicted RBP	31.82	■■■□□ 2.68
BRSK2-215	ENST00000544817	SYNJ2	O15056	1496 aa		31.69	■■■□□ 2.66
BRSK2-215	ENST00000544817	CEP162	Q5TB80	1403 aa		31.69	■■■□□ 2.66
BRSK2-215	ENST00000544817	CTTNBP2	Q8WZ74	1663 aa		31.63	■■■□□ 2.65
BRSK2-215	ENST00000544817	GRIN2A	Q12879	1464 aa		31.62	■■■□□ 2.65
BRSK2-215	ENST00000544817	CHMP7	Q8WUX9	453 aa	Predicted RBP	31.61	■■■□□ 2.65
BRSK2-215	ENST00000544817	CLIP1	P30622	1438 aa		31.55	■■■□□ 2.64

Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms