RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 DCAF8L2P0C7V8 631 aa28.18■■■□□ 2.1
HDAC5-201ENST00000225983 NISCHQ9Y2I1 1504 aa27.37■■□□□ 1.97
HDAC5-201ENST00000225983 SUPT5HO00267 1087 aaKnown RBP27.06■■□□□ 1.92
HDAC5-201ENST00000225983 SHROOM4Q9ULL8 1493 aa26.69■■□□□ 1.86
HDAC5-201ENST00000225983 EHMT2Q96KQ7 1210 aa26.17■■□□□ 1.78
HDAC5-201ENST00000225983 FAM9AQ8IZU1 332 aaPredicted RBP25.51■■□□□ 1.67
HDAC5-201ENST00000225983 PCGF6Q9BYE7 350 aa25.38■■□□□ 1.65
HDAC5-201ENST00000225983 APLP2Q06481 763 aa25.3■■□□□ 1.64
HDAC5-201ENST00000225983 TTBK1Q5TCY1 1321 aaPredicted RBP25.29■■□□□ 1.64
HDAC5-201ENST00000225983 PELP1Q8IZL8 1130 aaKnown RBP25.03■■□□□ 1.6
HDAC5-201ENST00000225983 TRIM41Q8WV44 630 aa24.97■■□□□ 1.59
HDAC5-201ENST00000225983 RANGAP1P46060 587 aaPredicted RBP24.93■■□□□ 1.58
HDAC5-201ENST00000225983 CCER1Q8TC90 406 aaPredicted RBP24.73■■□□□ 1.55
HDAC5-201ENST00000225983 ZEB1P37275 1124 aaPredicted RBP24.67■■□□□ 1.54
HDAC5-201ENST00000225983 UBTFP17480 764 aaKnown RBP24.59■■□□□ 1.53
HDAC5-201ENST00000225983 CENPBP07199 599 aaPredicted RBP24.54■■□□□ 1.52
HDAC5-201ENST00000225983 ATP1B4Q9UN42 357 aaPredicted RBP24.54■■□□□ 1.52
HDAC5-201ENST00000225983 PPARGC1BQ86YN6 1023 aaKnown RBP24.5■■□□□ 1.51
HDAC5-201ENST00000225983 YTHDC1Q96MU7 727 aaKnown RBP24.27■■□□□ 1.48
HDAC5-201ENST00000225983 TRIM26Q12899 539 aaPredicted RBP24.23■■□□□ 1.47
HDAC5-201ENST00000225983 LOC105371045A0A1W2PR82 267 aa24.21■■□□□ 1.47
HDAC5-201ENST00000225983 CHIC1Q5VXU3 224 aa24.16■■□□□ 1.46
HDAC5-201ENST00000225983 HRCP23327 699 aa24.11■■□□□ 1.45
HDAC5-201ENST00000225983 ERICH6Q7L0X2 663 aa24.09■■□□□ 1.45
HDAC5-201ENST00000225983 NEFLP07196 543 aa23.92■■□□□ 1.42
HDAC5-201ENST00000225983 ITGAEP38570 1179 aa23.89■■□□□ 1.41
HDAC5-201ENST00000225983 HNRNPUL2Q1KMD3 747 aaKnown RBP23.8■■□□□ 1.4
HDAC5-201ENST00000225983 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.63■■□□□ 1.37
HDAC5-201ENST00000225983 POLR3GLQ9BT43 218 aa23.54■■□□□ 1.36
HDAC5-201ENST00000225983 CNGB1Q14028 1251 aaPredicted RBP23.43■■□□□ 1.34
HDAC5-201ENST00000225983 ABCC9O60706 1549 aa23.42■■□□□ 1.34
HDAC5-201ENST00000225983 PABPN1Q86U42 306 aaKnown RBP eCLIP23.4■■□□□ 1.344e-8■■□□□ 11.4
HDAC5-201ENST00000225983 DIEXFQ68CQ4 756 aaKnown RBP23.39■■□□□ 1.33
HDAC5-201ENST00000225983 MYT1LQ9UL68 1186 aa23.37■■□□□ 1.33
HDAC5-201ENST00000225983 MYT1Q01538 1121 aa23.32■■□□□ 1.32
HDAC5-201ENST00000225983 FAM50AQ14320 339 aaKnown RBP23.24■■□□□ 1.31
HDAC5-201ENST00000225983 NEUROD1Q13562 356 aa23.1■■□□□ 1.29
HDAC5-201ENST00000225983 DAXXQ9UER7 740 aaPredicted RBP23.08■■□□□ 1.29
HDAC5-201ENST00000225983 TRIM52Q96A61 297 aa23.04■■□□□ 1.28
HDAC5-201ENST00000225983 GTF3C3Q9Y5Q9 886 aa22.95■■□□□ 1.26
HDAC5-201ENST00000225983 SLC4A1APQ9BWU0 796 aaKnown RBP22.95■■□□□ 1.26
HDAC5-201ENST00000225983 BCANQ96GW7 911 aa22.89■■□□□ 1.26
HDAC5-201ENST00000225983 ZNF316A6NFI3 1004 aaPredicted RBP22.85■■□□□ 1.25
HDAC5-201ENST00000225983 CSRNP3Q8WYN3 585 aa22.84■■□□□ 1.25
HDAC5-201ENST00000225983 ZNF326Q5BKZ1 582 aaKnown RBP22.81■■□□□ 1.24
HDAC5-201ENST00000225983 P3H3Q8IVL6 736 aa22.8■■□□□ 1.24
HDAC5-201ENST00000225983 ANP32CO43423 234 aa22.77■■□□□ 1.23
HDAC5-201ENST00000225983 CLSPNQ9HAW4 1339 aa22.71■■□□□ 1.23
HDAC5-201ENST00000225983 ARID3CA6NKF2 412 aa22.7■■□□□ 1.22
HDAC5-201ENST00000225983 FBLN2P98095 1184 aa22.7■■□□□ 1.22
HDAC5-201ENST00000225983 SCRIBQ14160 1630 aa22.7■■□□□ 1.22
HDAC5-201ENST00000225983 ZCCHC6Q5VYS8 1495 aaKnown RBP22.7■■□□□ 1.22
HDAC5-201ENST00000225983 RTL5Q5HYW3 569 aaPredicted RBP22.64■■□□□ 1.22
HDAC5-201ENST00000225983 ACIN1Q9UKV3 1341 aaKnown RBP22.63■■□□□ 1.21
HDAC5-201ENST00000225983 DCAF1Q9Y4B6 1507 aa22.54■■□□□ 1.2
HDAC5-201ENST00000225983 CDK11AQ9UQ88 783 aaPredicted RBP22.5■■□□□ 1.19
HDAC5-201ENST00000225983 ZNF777Q9ULD5 760 aaPredicted RBP22.45■■□□□ 1.18
HDAC5-201ENST00000225983 MYO15BQ96JP2 1530 aa22.31■■□□□ 1.16
HDAC5-201ENST00000225983 TONSLQ96HA7 1378 aa22.28■■□□□ 1.16
HDAC5-201ENST00000225983 DDX10Q13206 875 aaKnown RBP22.27■■□□□ 1.15
HDAC5-201ENST00000225983 CANXP27824 592 aaKnown RBP22.25■■□□□ 1.15
HDAC5-201ENST00000225983 FKBP8Q14318 412 aa22.24■■□□□ 1.15
HDAC5-201ENST00000225983 BCL11AQ9H165 835 aa22.23■■□□□ 1.15
HDAC5-201ENST00000225983 CCDC180Q9P1Z9 1646 aa22.21■■□□□ 1.15
HDAC5-201ENST00000225983 CHIC2Q9UKJ5 165 aa22.18■■□□□ 1.14
HDAC5-201ENST00000225983 HNRNPUQ00839 825 aaKnown RBP eCLIP22.16■■□□□ 1.14
HDAC5-201ENST00000225983 ZBTB47Q9UFB7 747 aaPredicted RBP22.15■■□□□ 1.14
HDAC5-201ENST00000225983 FAM9BQ8IZU0 186 aa22.13■■□□□ 1.13
HDAC5-201ENST00000225983 NPM2Q86SE8 214 aaKnown RBP22.11■■□□□ 1.13
HDAC5-201ENST00000225983 SLC24A1O60721 1099 aa22.1■■□□□ 1.13
HDAC5-201ENST00000225983 ANP32AP39687 249 aaKnown RBP22.08■■□□□ 1.13
HDAC5-201ENST00000225983 CLIP1P30622 1438 aa22.08■■□□□ 1.13
HDAC5-201ENST00000225983 RSF1Q96T23 1441 aaPredicted RBP22.08■■□□□ 1.13
HDAC5-201ENST00000225983 MIER1Q8N108 512 aa22.07■■□□□ 1.12
HDAC5-201ENST00000225983 NEFMP07197 916 aa22.04■■□□□ 1.12
HDAC5-201ENST00000225983 HIRIP3Q9BW71 556 aaPredicted RBP22.04■■□□□ 1.12
HDAC5-201ENST00000225983 SALL2Q9Y467 1007 aaPredicted RBP22.03■■□□□ 1.12
HDAC5-201ENST00000225983 SCAF1Q9H7N4 1312 aaKnown RBP22.02■■□□□ 1.12
HDAC5-201ENST00000225983 CHGAP10645 457 aaKnown RBP22■■□□□ 1.11
HDAC5-201ENST00000225983 CEP162Q5TB80 1403 aa21.97■■□□□ 1.11
HDAC5-201ENST00000225983 MTUS2Q5JR59 1369 aa21.96■■□□□ 1.11
HDAC5-201ENST00000225983 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.95■■□□□ 1.14e-6■□□□□ 8.4
HDAC5-201ENST00000225983 GOLGA3Q08378 1498 aa21.9■■□□□ 1.1
HDAC5-201ENST00000225983 KDM2AQ9Y2K7 1162 aa21.9■■□□□ 1.1
HDAC5-201ENST00000225983 TMC1Q8TDI8 760 aa21.89■■□□□ 1.09
HDAC5-201ENST00000225983 MRS2Q9HD23 443 aa21.88■■□□□ 1.09
HDAC5-201ENST00000225983 RRP7BPQ9NSQ0 103 aa21.87■■□□□ 1.09
HDAC5-201ENST00000225983 IRX6P78412 446 aaPredicted RBP21.86■■□□□ 1.09
HDAC5-201ENST00000225983 RB1CC1Q8TDY2 1594 aa21.83■■□□□ 1.08
HDAC5-201ENST00000225983 WRNQ14191 1432 aaPredicted RBP eCLIP21.82■■□□□ 1.08
HDAC5-201ENST00000225983 EEA1Q15075 1411 aa21.82■■□□□ 1.08
HDAC5-201ENST00000225983 TSPY4P0CV99 314 aa21.81■■□□□ 1.08
HDAC5-201ENST00000225983 TSPY10P0CW01 314 aa21.81■■□□□ 1.08
HDAC5-201ENST00000225983 CCDC136Q96JN2 1154 aa21.81■■□□□ 1.08
HDAC5-201ENST00000225983 STAG3Q9UJ98 1225 aa21.81■■□□□ 1.08
HDAC5-201ENST00000225983 ESF1Q9H501 851 aaKnown RBP21.76■■□□□ 1.07
HDAC5-201ENST00000225983 CHMP7Q8WUX9 453 aaPredicted RBP21.76■■□□□ 1.07
HDAC5-201ENST00000225983 EIF4G2P78344 907 aaKnown RBP eCLIP21.75■■□□□ 1.07
HDAC5-201ENST00000225983 TNIKQ9UKE5 1360 aa21.73■■□□□ 1.07
HDAC5-201ENST00000225983 PLPPR3Q6T4P5 718 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms