RNA–Protein interactions for RNA: ENST00000429586.6

ABCF3-203, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ABCF3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-203ENST00000429586 NISCHQ9Y2I1 1504 aa38.1■■■■□ 3.69
ABCF3-203ENST00000429586 CCDC180Q9P1Z9 1646 aa33.17■■■□□ 2.9
ABCF3-203ENST00000429586 ZCCHC6Q5VYS8 1495 aaKnown RBP31.98■■■□□ 2.71
ABCF3-203ENST00000429586 DCAF8L2P0C7V8 631 aa31.74■■■□□ 2.67
ABCF3-203ENST00000429586 ABCC9O60706 1549 aa31.63■■■□□ 2.65
ABCF3-203ENST00000429586 DCAF1Q9Y4B6 1507 aa31.35■■■□□ 2.61
ABCF3-203ENST00000429586 SHROOM4Q9ULL8 1493 aa31.33■■■□□ 2.61
ABCF3-203ENST00000429586 MYO15BQ96JP2 1530 aa30.96■■■□□ 2.55
ABCF3-203ENST00000429586 NACADO15069 1562 aa30.9■■■□□ 2.54
ABCF3-203ENST00000429586 SCRIBQ14160 1630 aa30.71■■■□□ 2.51
ABCF3-203ENST00000429586 RB1CC1Q8TDY2 1594 aa30.7■■■□□ 2.5
ABCF3-203ENST00000429586 UNC13AQ9UPW8 1703 aa30.23■■■□□ 2.43
ABCF3-203ENST00000429586 SUPT5HO00267 1087 aaKnown RBP30.08■■■□□ 2.41
ABCF3-203ENST00000429586 PABPN1Q86U42 306 aaKnown RBP eCLIP29.88■■■□□ 2.371e-6■■■□□ 18.9
ABCF3-203ENST00000429586 BICRAQ9NZM4 1560 aa29.85■■■□□ 2.37
ABCF3-203ENST00000429586 CECR2Q9BXF3 1484 aa29.73■■■□□ 2.35
ABCF3-203ENST00000429586 RSF1Q96T23 1441 aaPredicted RBP29.57■■■□□ 2.32
ABCF3-203ENST00000429586 MROH2BQ7Z745 1585 aa29.52■■■□□ 2.32
ABCF3-203ENST00000429586 BAZ1AQ9NRL2 1556 aaPredicted RBP29.4■■■□□ 2.3
ABCF3-203ENST00000429586 SMARCA4P51532 1647 aa29.33■■■□□ 2.29
ABCF3-203ENST00000429586 WIZO95785 1651 aa29.32■■■□□ 2.28
ABCF3-203ENST00000429586 EIF4G1Q04637 1599 aaKnown RBP28.94■■■□□ 2.22
ABCF3-203ENST00000429586 TOP2AP11388 1531 aaKnown RBP28.89■■■□□ 2.21
ABCF3-203ENST00000429586 PEG3Q9GZU2 1588 aa28.86■■■□□ 2.21
ABCF3-203ENST00000429586 ATAD2BQ9ULI0 1458 aa28.84■■■□□ 2.21
ABCF3-203ENST00000429586 SMARCA2P51531 1590 aa28.77■■■□□ 2.2
ABCF3-203ENST00000429586 BAZ1BQ9UIG0 1483 aaKnown RBP28.7■■■□□ 2.18
ABCF3-203ENST00000429586 CCDC88BA6NC98 1476 aa28.65■■■□□ 2.18
ABCF3-203ENST00000429586 CHIC1Q5VXU3 224 aa28.64■■■□□ 2.18
ABCF3-203ENST00000429586 CC2D2AQ9P2K1 1620 aa28.56■■■□□ 2.16
ABCF3-203ENST00000429586 NCAPD3P42695 1498 aa28.53■■■□□ 2.16
ABCF3-203ENST00000429586 HMGXB3Q12766 1538 aa28.49■■■□□ 2.15
ABCF3-203ENST00000429586 TRIM41Q8WV44 630 aa28.17■■■□□ 2.1
ABCF3-203ENST00000429586 ABCC8Q09428 1581 aa28.15■■■□□ 2.1
ABCF3-203ENST00000429586 DNAJC5BQ9UF47 199 aa28.04■■■□□ 2.08
ABCF3-203ENST00000429586 CFTRP13569 1480 aa27.92■■■□□ 2.06
ABCF3-203ENST00000429586 CADPSQ9ULU8 1353 aa27.84■■■□□ 2.05
ABCF3-203ENST00000429586 WRNQ14191 1432 aaPredicted RBP eCLIP27.84■■■□□ 2.05
ABCF3-203ENST00000429586 FAM9AQ8IZU1 332 aaPredicted RBP27.82■■■□□ 2.04
ABCF3-203ENST00000429586 PRDM2Q13029 1718 aa27.81■■■□□ 2.04
ABCF3-203ENST00000429586 SYNJ1O43426 1573 aa27.79■■■□□ 2.04
ABCF3-203ENST00000429586 NESP48681 1621 aa27.78■■■□□ 2.04
ABCF3-203ENST00000429586 HRCP23327 699 aa27.7■■■□□ 2.02
ABCF3-203ENST00000429586 LOC105371045A0A1W2PR82 267 aa27.68■■■□□ 2.02
ABCF3-203ENST00000429586 TOP2BQ02880 1626 aa27.6■■■□□ 2.01
ABCF3-203ENST00000429586 LAMC3Q9Y6N6 1575 aa27.59■■■□□ 2.01
ABCF3-203ENST00000429586 CUX1P39880 1505 aa27.59■■■□□ 2.01
ABCF3-203ENST00000429586 FANCD2Q9BXW9 1451 aa27.58■■■□□ 2.01
ABCF3-203ENST00000429586 EHMT2Q96KQ7 1210 aa27.56■■■□□ 2
ABCF3-203ENST00000429586 SOGA1O94964 1423 aa27.56■■■□□ 2
ABCF3-203ENST00000429586 BIVM-ERCC5R4GMW8 1640 aa27.56■■■□□ 2
ABCF3-203ENST00000429586 RUSC2Q8N2Y8 1516 aa27.5■■□□□ 1.99
ABCF3-203ENST00000429586 PELP1Q8IZL8 1130 aaKnown RBP27.43■■□□□ 1.98
ABCF3-203ENST00000429586 KIF21AQ7Z4S6 1674 aa27.41■■□□□ 1.98
ABCF3-203ENST00000429586 CEP164Q9UPV0 1460 aa27.4■■□□□ 1.98
ABCF3-203ENST00000429586 PDS5BQ9NTI5 1447 aa27.38■■□□□ 1.97
ABCF3-203ENST00000429586 FGD5Q6ZNL6 1462 aa27.29■■□□□ 1.96
ABCF3-203ENST00000429586 DNMBPQ6XZF7 1577 aa27.29■■□□□ 1.96
ABCF3-203ENST00000429586 EEA1Q15075 1411 aa27.28■■□□□ 1.96
ABCF3-203ENST00000429586 TOPBP1Q92547 1522 aa27.28■■□□□ 1.96
ABCF3-203ENST00000429586 CSRNP3Q8WYN3 585 aa27.27■■□□□ 1.96
ABCF3-203ENST00000429586 URB2Q14146 1524 aaKnown RBP27.27■■□□□ 1.96
ABCF3-203ENST00000429586 POLA1P09884 1462 aaPredicted RBP27.16■■□□□ 1.94
ABCF3-203ENST00000429586 RAD54L2Q9Y4B4 1467 aa27.14■■□□□ 1.94
ABCF3-203ENST00000429586 CUX2O14529 1486 aa27.12■■□□□ 1.93
ABCF3-203ENST00000429586 KIF27Q86VH2 1401 aa27.1■■□□□ 1.93
ABCF3-203ENST00000429586 ERCC6Q03468 1493 aa27.07■■□□□ 1.92
ABCF3-203ENST00000429586 MRC2Q9UBG0 1479 aa27.06■■□□□ 1.92
ABCF3-203ENST00000429586 KIF21BO75037 1637 aa27.02■■□□□ 1.92
ABCF3-203ENST00000429586 UBTFP17480 764 aaKnown RBP27.02■■□□□ 1.92
ABCF3-203ENST00000429586 GOLGA3Q08378 1498 aa27.01■■□□□ 1.91
ABCF3-203ENST00000429586 RAPGEF2Q9Y4G8 1499 aa26.98■■□□□ 1.91
ABCF3-203ENST00000429586 ABCA10Q8WWZ4 1543 aa26.97■■□□□ 1.91
ABCF3-203ENST00000429586 WDR97A6NE52 1622 aa26.93■■□□□ 1.9
ABCF3-203ENST00000429586 WDR62O43379 1518 aa26.91■■□□□ 1.9
ABCF3-203ENST00000429586 PRXQ9BXM0 1461 aa26.9■■□□□ 1.9
ABCF3-203ENST00000429586 THOC2Q8NI27 1593 aaKnown RBP26.89■■□□□ 1.9
ABCF3-203ENST00000429586 PPARGC1BQ86YN6 1023 aaKnown RBP26.89■■□□□ 1.9
ABCF3-203ENST00000429586 IGF1RP08069 1367 aa26.89■■□□□ 1.9
ABCF3-203ENST00000429586 TNIKQ9UKE5 1360 aa26.89■■□□□ 1.89
ABCF3-203ENST00000429586 TDRD9Q8NDG6 1382 aaKnown RBP26.88■■□□□ 1.89
ABCF3-203ENST00000429586 TARBP1Q13395 1621 aaKnown RBP26.88■■□□□ 1.89
ABCF3-203ENST00000429586 CEP162Q5TB80 1403 aa26.83■■□□□ 1.89
ABCF3-203ENST00000429586 ERICH3Q5RHP9 1530 aa26.81■■□□□ 1.88
ABCF3-203ENST00000429586 ABCA5Q8WWZ7 1642 aa26.8■■□□□ 1.88
ABCF3-203ENST00000429586 RANGAP1P46060 587 aaPredicted RBP26.77■■□□□ 1.88
ABCF3-203ENST00000429586 PCGF6Q9BYE7 350 aa26.76■■□□□ 1.87
ABCF3-203ENST00000429586 CARMIL1Q5VZK9 1371 aa26.76■■□□□ 1.87
ABCF3-203ENST00000429586 GAPVD1Q14C86 1478 aa26.75■■□□□ 1.87
ABCF3-203ENST00000429586 AQRO60306 1485 aaKnown RBP eCLIP26.72■■□□□ 1.877e-7■■■■■ 27.7
ABCF3-203ENST00000429586 ZNF608Q9ULD9 1512 aaPredicted RBP26.7■■□□□ 1.86
ABCF3-203ENST00000429586 IFT140Q96RY7 1462 aa26.69■■□□□ 1.86
ABCF3-203ENST00000429586 CUL7Q14999 1698 aa26.65■■□□□ 1.86
ABCF3-203ENST00000429586 PBRM1Q86U86 1689 aa26.65■■□□□ 1.86
ABCF3-203ENST00000429586 CLIP1P30622 1438 aa26.62■■□□□ 1.85
ABCF3-203ENST00000429586 EIF4G3O43432 1585 aaKnown RBP26.57■■□□□ 1.84
ABCF3-203ENST00000429586 MYT1Q01538 1121 aa26.53■■□□□ 1.84
ABCF3-203ENST00000429586 GRIN2BQ13224 1484 aa26.51■■□□□ 1.83
ABCF3-203ENST00000429586 ADAMTS12P58397 1594 aa26.46■■□□□ 1.83
ABCF3-203ENST00000429586 CTTNBP2Q8WZ74 1663 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms