RNA–Protein interactions for RNA: ENST00000321453.11

PDE1C-201, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-201ENST00000321453 NISCHQ9Y2I1 1504 aa30.95■■■□□ 2.54
PDE1C-201ENST00000321453 HRCP23327 699 aa28.09■■■□□ 2.09
PDE1C-201ENST00000321453 SHROOM4Q9ULL8 1493 aa28.01■■■□□ 2.07
PDE1C-201ENST00000321453 SUPT5HO00267 1087 aaKnown RBP27.89■■■□□ 2.06
PDE1C-201ENST00000321453 PPARGC1BQ86YN6 1023 aaKnown RBP27.84■■■□□ 2.05
PDE1C-201ENST00000321453 PCGF6Q9BYE7 350 aa27.73■■■□□ 2.03
PDE1C-201ENST00000321453 MYO15BQ96JP2 1530 aa27.49■■□□□ 1.99
PDE1C-201ENST00000321453 CHIC1Q5VXU3 224 aa27.22■■□□□ 1.95
PDE1C-201ENST00000321453 PELP1Q8IZL8 1130 aaKnown RBP26.93■■□□□ 1.9
PDE1C-201ENST00000321453 LOC105371045A0A1W2PR82 267 aa26.81■■□□□ 1.88
PDE1C-201ENST00000321453 SCAF1Q9H7N4 1312 aaKnown RBP26.74■■□□□ 1.87
PDE1C-201ENST00000321453 DCAF1Q9Y4B6 1507 aa26.62■■□□□ 1.85
PDE1C-201ENST00000321453 TRIM26Q12899 539 aaPredicted RBP26.57■■□□□ 1.84
PDE1C-201ENST00000321453 DCAF8L2P0C7V8 631 aa26.36■■□□□ 1.81
PDE1C-201ENST00000321453 CCDC180Q9P1Z9 1646 aa26.32■■□□□ 1.8
PDE1C-201ENST00000321453 ZCCHC6Q5VYS8 1495 aaKnown RBP26.31■■□□□ 1.8
PDE1C-201ENST00000321453 ZEB1P37275 1124 aaPredicted RBP26.23■■□□□ 1.79
PDE1C-201ENST00000321453 EHMT2Q96KQ7 1210 aa26.01■■□□□ 1.75
PDE1C-201ENST00000321453 NEUROD1Q13562 356 aa26.01■■□□□ 1.75
PDE1C-201ENST00000321453 ACIN1Q9UKV3 1341 aaKnown RBP25.96■■□□□ 1.75
PDE1C-201ENST00000321453 FAM9AQ8IZU1 332 aaPredicted RBP25.89■■□□□ 1.74
PDE1C-201ENST00000321453 GTF3C3Q9Y5Q9 886 aa25.89■■□□□ 1.73
PDE1C-201ENST00000321453 MYT1Q01538 1121 aa25.78■■□□□ 1.72
PDE1C-201ENST00000321453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.7■■□□□ 1.7
PDE1C-201ENST00000321453 TRIM41Q8WV44 630 aa25.61■■□□□ 1.69
PDE1C-201ENST00000321453 CENPBP07199 599 aaPredicted RBP25.59■■□□□ 1.69
PDE1C-201ENST00000321453 CCER1Q8TC90 406 aaPredicted RBP25.58■■□□□ 1.68
PDE1C-201ENST00000321453 DIEXFQ68CQ4 756 aaKnown RBP25.56■■□□□ 1.68
PDE1C-201ENST00000321453 YTHDC1Q96MU7 727 aaKnown RBP25.42■■□□□ 1.66
PDE1C-201ENST00000321453 TTBK1Q5TCY1 1321 aaPredicted RBP25.37■■□□□ 1.65
PDE1C-201ENST00000321453 RB1CC1Q8TDY2 1594 aa25.05■■□□□ 1.6
PDE1C-201ENST00000321453 ABCC9O60706 1549 aa25.03■■□□□ 1.6
PDE1C-201ENST00000321453 RSF1Q96T23 1441 aaPredicted RBP25.03■■□□□ 1.6
PDE1C-201ENST00000321453 ZNF316A6NFI3 1004 aaPredicted RBP24.97■■□□□ 1.59
PDE1C-201ENST00000321453 MIER1Q8N108 512 aa24.95■■□□□ 1.58
PDE1C-201ENST00000321453 SCRIBQ14160 1630 aa24.73■■□□□ 1.55
PDE1C-201ENST00000321453 HNRNPUL2Q1KMD3 747 aaKnown RBP24.57■■□□□ 1.52
PDE1C-201ENST00000321453 BCL11AQ9H165 835 aa24.54■■□□□ 1.52
PDE1C-201ENST00000321453 SUPT16HQ9Y5B9 1047 aaKnown RBP24.54■■□□□ 1.52
PDE1C-201ENST00000321453 CEP162Q5TB80 1403 aa24.47■■□□□ 1.51
PDE1C-201ENST00000321453 ANP32EQ9BTT0 268 aa24.47■■□□□ 1.51
PDE1C-201ENST00000321453 TSHZ2Q9NRE2 1034 aa24.45■■□□□ 1.5
PDE1C-201ENST00000321453 CECR2Q9BXF3 1484 aa24.42■■□□□ 1.5
PDE1C-201ENST00000321453 WRNQ14191 1432 aaPredicted RBP eCLIP24.4■■□□□ 1.5
PDE1C-201ENST00000321453 UBTFP17480 764 aaKnown RBP24.37■■□□□ 1.49
PDE1C-201ENST00000321453 CSRNP3Q8WYN3 585 aa24.34■■□□□ 1.49
PDE1C-201ENST00000321453 MROH2BQ7Z745 1585 aa24.33■■□□□ 1.48
PDE1C-201ENST00000321453 BCANQ96GW7 911 aa24.3■■□□□ 1.48
PDE1C-201ENST00000321453 WIZO95785 1651 aa24.29■■□□□ 1.48
PDE1C-201ENST00000321453 ABCC8Q09428 1581 aa24.27■■□□□ 1.48
PDE1C-201ENST00000321453 CCDC88BA6NC98 1476 aa24.26■■□□□ 1.47
PDE1C-201ENST00000321453 SOGA1O94964 1423 aa24.23■■□□□ 1.47
PDE1C-201ENST00000321453 TNIKQ9UKE5 1360 aa24.17■■□□□ 1.46
PDE1C-201ENST00000321453 RUSC2Q8N2Y8 1516 aa24.12■■□□□ 1.45
PDE1C-201ENST00000321453 CLSPNQ9HAW4 1339 aa24.12■■□□□ 1.45
PDE1C-201ENST00000321453 RANGAP1P46060 587 aaPredicted RBP24.1■■□□□ 1.45
PDE1C-201ENST00000321453 KCNH8Q96L42 1107 aa24.09■■□□□ 1.45
PDE1C-201ENST00000321453 EIF4G1Q04637 1599 aaKnown RBP24.06■■□□□ 1.44
PDE1C-201ENST00000321453 FKBP8Q14318 412 aa23.98■■□□□ 1.43
PDE1C-201ENST00000321453 APLP2Q06481 763 aa23.93■■□□□ 1.42
PDE1C-201ENST00000321453 BAZ1AQ9NRL2 1556 aaPredicted RBP23.92■■□□□ 1.42
PDE1C-201ENST00000321453 ITGAEP38570 1179 aa23.89■■□□□ 1.41
PDE1C-201ENST00000321453 GOLGA3Q08378 1498 aa23.89■■□□□ 1.41
PDE1C-201ENST00000321453 RBM19Q9Y4C8 960 aaKnown RBP23.87■■□□□ 1.41
PDE1C-201ENST00000321453 DHX57Q6P158 1386 aaKnown RBP23.82■■□□□ 1.4
PDE1C-201ENST00000321453 CLIP1P30622 1438 aa23.8■■□□□ 1.4
PDE1C-201ENST00000321453 NACADO15069 1562 aa23.77■■□□□ 1.4
PDE1C-201ENST00000321453 EEA1Q15075 1411 aa23.73■■□□□ 1.39
PDE1C-201ENST00000321453 MSH5O43196 834 aa23.71■■□□□ 1.39
PDE1C-201ENST00000321453 VPS8Q8N3P4 1428 aa23.7■■□□□ 1.38
PDE1C-201ENST00000321453 NEFLP07196 543 aa23.69■■□□□ 1.38
PDE1C-201ENST00000321453 TRIM52Q96A61 297 aa23.67■■□□□ 1.38
PDE1C-201ENST00000321453 DDX10Q13206 875 aaKnown RBP23.65■■□□□ 1.38
PDE1C-201ENST00000321453 SMARCA2P51531 1590 aa23.64■■□□□ 1.37
PDE1C-201ENST00000321453 TOP2AP11388 1531 aaKnown RBP23.63■■□□□ 1.37
PDE1C-201ENST00000321453 CEP164Q9UPV0 1460 aa23.59■■□□□ 1.37
PDE1C-201ENST00000321453 HIRIP3Q9BW71 556 aaPredicted RBP23.56■■□□□ 1.36
PDE1C-201ENST00000321453 KANK4Q5T7N3 995 aaPredicted RBP23.54■■□□□ 1.36
PDE1C-201ENST00000321453 ERICH6Q7L0X2 663 aa23.54■■□□□ 1.36
PDE1C-201ENST00000321453 RAPGEF2Q9Y4G8 1499 aa23.51■■□□□ 1.35
PDE1C-201ENST00000321453 IRX6P78412 446 aaPredicted RBP23.5■■□□□ 1.35
PDE1C-201ENST00000321453 PRKCSHP14314 528 aaPredicted RBP23.48■■□□□ 1.35
PDE1C-201ENST00000321453 KIF21BO75037 1637 aa23.48■■□□□ 1.35
PDE1C-201ENST00000321453 SYNJ1O43426 1573 aa23.38■■□□□ 1.33
PDE1C-201ENST00000321453 SMARCA4P51532 1647 aa23.37■■□□□ 1.33
PDE1C-201ENST00000321453 SIN3AQ96ST3 1273 aa23.37■■□□□ 1.33
PDE1C-201ENST00000321453 CDK11AQ9UQ88 783 aaPredicted RBP23.31■■□□□ 1.32
PDE1C-201ENST00000321453 ANP32CO43423 234 aa23.29■■□□□ 1.32
PDE1C-201ENST00000321453 DEKP35659 375 aaKnown RBP23.29■■□□□ 1.32
PDE1C-201ENST00000321453 WDR97A6NE52 1622 aa23.28■■□□□ 1.32
PDE1C-201ENST00000321453 PPP1R15AO75807 674 aaPredicted RBP23.28■■□□□ 1.32
PDE1C-201ENST00000321453 BAZ1BQ9UIG0 1483 aaKnown RBP23.28■■□□□ 1.32
PDE1C-201ENST00000321453 FANCIQ9NVI1 1328 aa23.27■■□□□ 1.32
PDE1C-201ENST00000321453 RAB3GAP2Q9H2M9 1393 aa23.27■■□□□ 1.32
PDE1C-201ENST00000321453 CCNB3Q8WWL7 1395 aa23.24■■□□□ 1.31
PDE1C-201ENST00000321453 MAPKBP1O60336 1514 aa23.23■■□□□ 1.31
PDE1C-201ENST00000321453 ARAP1Q96P48 1450 aa23.22■■□□□ 1.31
PDE1C-201ENST00000321453 RRBP1Q9P2E9 1410 aaKnown RBP23.21■■□□□ 1.31
PDE1C-201ENST00000321453 NBR1Q14596 966 aa23.2■■□□□ 1.3
PDE1C-201ENST00000321453 HNRNPUQ00839 825 aaKnown RBP eCLIP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms