RNA–Protein interactions for RNA: ENST00000342833.3

FOXD4L3-201, Transcript of forkhead box D4 like 3, humanhuman

APPRIS P1 BASIC

Gene FOXD4L3, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L3-201ENST00000342833 NISCHQ9Y2I1 1504 aa45.57■■■■■ 4.89
FOXD4L3-201ENST00000342833 CCDC180Q9P1Z9 1646 aa39.43■■■■□ 3.9
FOXD4L3-201ENST00000342833 ZCCHC6Q5VYS8 1495 aaKnown RBP38.4■■■■□ 3.74
FOXD4L3-201ENST00000342833 SHROOM4Q9ULL8 1493 aa37.7■■■■□ 3.63
FOXD4L3-201ENST00000342833 DCAF1Q9Y4B6 1507 aa37.62■■■■□ 3.61
FOXD4L3-201ENST00000342833 DCAF8L2P0C7V8 631 aa37.58■■■■□ 3.61
FOXD4L3-201ENST00000342833 MYO15BQ96JP2 1530 aa36.94■■■■□ 3.5
FOXD4L3-201ENST00000342833 ABCC9O60706 1549 aa36.89■■■■□ 3.5
FOXD4L3-201ENST00000342833 NACADO15069 1562 aa36.59■■■■□ 3.45
FOXD4L3-201ENST00000342833 SUPT5HO00267 1087 aaKnown RBP36.55■■■■□ 3.44
FOXD4L3-201ENST00000342833 SCRIBQ14160 1630 aa36.44■■■■□ 3.42
FOXD4L3-201ENST00000342833 RB1CC1Q8TDY2 1594 aa36.17■■■■□ 3.38
FOXD4L3-201ENST00000342833 RSF1Q96T23 1441 aaPredicted RBP35.59■■■■□ 3.29
FOXD4L3-201ENST00000342833 UNC13AQ9UPW8 1703 aa35.53■■■■□ 3.28
FOXD4L3-201ENST00000342833 CECR2Q9BXF3 1484 aa35.41■■■■□ 3.26
FOXD4L3-201ENST00000342833 MROH2BQ7Z745 1585 aa35.27■■■■□ 3.24
FOXD4L3-201ENST00000342833 CHIC1Q5VXU3 224 aa35.23■■■■□ 3.23
FOXD4L3-201ENST00000342833 BAZ1AQ9NRL2 1556 aaPredicted RBP35.14■■■■□ 3.22
FOXD4L3-201ENST00000342833 BICRAQ9NZM4 1560 aa35.1■■■■□ 3.21
FOXD4L3-201ENST00000342833 WIZO95785 1651 aa35.03■■■■□ 3.2
FOXD4L3-201ENST00000342833 SMARCA4P51532 1647 aa34.93■■■■□ 3.18
FOXD4L3-201ENST00000342833 PABPN1Q86U42 306 aaKnown RBP eCLIP34.93■■■■□ 3.18
FOXD4L3-201ENST00000342833 TOP2AP11388 1531 aaKnown RBP34.62■■■■□ 3.13
FOXD4L3-201ENST00000342833 PEG3Q9GZU2 1588 aa34.44■■■■□ 3.1
FOXD4L3-201ENST00000342833 SMARCA2P51531 1590 aa34.34■■■■□ 3.09
FOXD4L3-201ENST00000342833 CCDC88BA6NC98 1476 aa34.31■■■■□ 3.08
FOXD4L3-201ENST00000342833 EIF4G1Q04637 1599 aaKnown RBP34.28■■■■□ 3.08
FOXD4L3-201ENST00000342833 TRIM41Q8WV44 630 aa34.28■■■■□ 3.08
FOXD4L3-201ENST00000342833 ATAD2BQ9ULI0 1458 aa34.2■■■■□ 3.07
FOXD4L3-201ENST00000342833 BAZ1BQ9UIG0 1483 aaKnown RBP34.06■■■■□ 3.04
FOXD4L3-201ENST00000342833 LOC105371045A0A1W2PR82 267 aa33.96■■■■□ 3.03
FOXD4L3-201ENST00000342833 ABCC8Q09428 1581 aa33.83■■■■□ 3.01
FOXD4L3-201ENST00000342833 NCAPD3P42695 1498 aa33.79■■■■□ 3
FOXD4L3-201ENST00000342833 HMGXB3Q12766 1538 aa33.79■■■■□ 3
FOXD4L3-201ENST00000342833 FAM9AQ8IZU1 332 aaPredicted RBP33.73■■■□□ 2.99
FOXD4L3-201ENST00000342833 WRNQ14191 1432 aaPredicted RBP eCLIP33.49■■■□□ 2.95
FOXD4L3-201ENST00000342833 CC2D2AQ9P2K1 1620 aa33.37■■■□□ 2.93
FOXD4L3-201ENST00000342833 SYNJ1O43426 1573 aa33.35■■■□□ 2.93
FOXD4L3-201ENST00000342833 SOGA1O94964 1423 aa33.29■■■□□ 2.92
FOXD4L3-201ENST00000342833 EHMT2Q96KQ7 1210 aa33.29■■■□□ 2.92
FOXD4L3-201ENST00000342833 EEA1Q15075 1411 aa33.25■■■□□ 2.91
FOXD4L3-201ENST00000342833 CFTRP13569 1480 aa33.22■■■□□ 2.91
FOXD4L3-201ENST00000342833 RUSC2Q8N2Y8 1516 aa33.14■■■□□ 2.9
FOXD4L3-201ENST00000342833 TOP2BQ02880 1626 aa33.14■■■□□ 2.9
FOXD4L3-201ENST00000342833 BIVM-ERCC5R4GMW8 1640 aa33.08■■■□□ 2.89
FOXD4L3-201ENST00000342833 PRDM2Q13029 1718 aa33.07■■■□□ 2.89
FOXD4L3-201ENST00000342833 CSRNP3Q8WYN3 585 aa33.07■■■□□ 2.89
FOXD4L3-201ENST00000342833 PCGF6Q9BYE7 350 aa33.01■■■□□ 2.88
FOXD4L3-201ENST00000342833 CADPSQ9ULU8 1353 aa32.98■■■□□ 2.87
FOXD4L3-201ENST00000342833 CUX1P39880 1505 aa32.93■■■□□ 2.86
FOXD4L3-201ENST00000342833 GOLGA3Q08378 1498 aa32.87■■■□□ 2.85
FOXD4L3-201ENST00000342833 TNIKQ9UKE5 1360 aa32.86■■■□□ 2.85
FOXD4L3-201ENST00000342833 KIF21BO75037 1637 aa32.82■■■□□ 2.84
FOXD4L3-201ENST00000342833 CEP164Q9UPV0 1460 aa32.81■■■□□ 2.84
FOXD4L3-201ENST00000342833 TRIM26Q12899 539 aaPredicted RBP32.81■■■□□ 2.84
FOXD4L3-201ENST00000342833 CEP162Q5TB80 1403 aa32.77■■■□□ 2.84
FOXD4L3-201ENST00000342833 UBTFP17480 764 aaKnown RBP32.75■■■□□ 2.83
FOXD4L3-201ENST00000342833 FANCD2Q9BXW9 1451 aa32.64■■■□□ 2.82
FOXD4L3-201ENST00000342833 RAPGEF2Q9Y4G8 1499 aa32.58■■■□□ 2.81
FOXD4L3-201ENST00000342833 KIF27Q86VH2 1401 aa32.58■■■□□ 2.81
FOXD4L3-201ENST00000342833 NESP48681 1621 aa32.58■■■□□ 2.81
FOXD4L3-201ENST00000342833 LAMC3Q9Y6N6 1575 aa32.55■■■□□ 2.8
FOXD4L3-201ENST00000342833 PRXQ9BXM0 1461 aa32.5■■■□□ 2.79
FOXD4L3-201ENST00000342833 ERICH3Q5RHP9 1530 aa32.5■■■□□ 2.79
FOXD4L3-201ENST00000342833 FGD5Q6ZNL6 1462 aa32.49■■■□□ 2.79
FOXD4L3-201ENST00000342833 HRCP23327 699 aa32.48■■■□□ 2.79
FOXD4L3-201ENST00000342833 DNMBPQ6XZF7 1577 aa32.43■■■□□ 2.78
FOXD4L3-201ENST00000342833 DNAJC5BQ9UF47 199 aa32.43■■■□□ 2.78
FOXD4L3-201ENST00000342833 CUX2O14529 1486 aa32.39■■■□□ 2.78
FOXD4L3-201ENST00000342833 CLIP1P30622 1438 aa32.38■■■□□ 2.77
FOXD4L3-201ENST00000342833 PPARGC1BQ86YN6 1023 aaKnown RBP32.36■■■□□ 2.77
FOXD4L3-201ENST00000342833 TOPBP1Q92547 1522 aa32.35■■■□□ 2.77
FOXD4L3-201ENST00000342833 PDS5BQ9NTI5 1447 aa32.29■■■□□ 2.76
FOXD4L3-201ENST00000342833 POLA1P09884 1462 aaPredicted RBP32.25■■■□□ 2.75
FOXD4L3-201ENST00000342833 IGF1RP08069 1367 aa32.23■■■□□ 2.75
FOXD4L3-201ENST00000342833 URB2Q14146 1524 aaKnown RBP32.21■■■□□ 2.75
FOXD4L3-201ENST00000342833 ABCA10Q8WWZ4 1543 aa32.18■■■□□ 2.74
FOXD4L3-201ENST00000342833 KIF21AQ7Z4S6 1674 aa32.17■■■□□ 2.74
FOXD4L3-201ENST00000342833 RAD54L2Q9Y4B4 1467 aa32.17■■■□□ 2.74
FOXD4L3-201ENST00000342833 VPS8Q8N3P4 1428 aa32.17■■■□□ 2.74
FOXD4L3-201ENST00000342833 RANGAP1P46060 587 aaPredicted RBP32.11■■■□□ 2.73
FOXD4L3-201ENST00000342833 CARMIL1Q5VZK9 1371 aa32.09■■■□□ 2.73
FOXD4L3-201ENST00000342833 WDR97A6NE52 1622 aa32.04■■■□□ 2.72
FOXD4L3-201ENST00000342833 TTBK1Q5TCY1 1321 aaPredicted RBP32.01■■■□□ 2.71
FOXD4L3-201ENST00000342833 ARAP1Q96P48 1450 aa31.99■■■□□ 2.71
FOXD4L3-201ENST00000342833 CUL7Q14999 1698 aa31.92■■■□□ 2.7
FOXD4L3-201ENST00000342833 ABCA5Q8WWZ7 1642 aa31.88■■■□□ 2.69
FOXD4L3-201ENST00000342833 ARHGAP35Q9NRY4 1499 aa31.88■■■□□ 2.69
FOXD4L3-201ENST00000342833 APLP2Q06481 763 aa31.88■■■□□ 2.69
FOXD4L3-201ENST00000342833 MRC2Q9UBG0 1479 aa31.84■■■□□ 2.69
FOXD4L3-201ENST00000342833 TARBP1Q13395 1621 aaKnown RBP31.82■■■□□ 2.68
FOXD4L3-201ENST00000342833 TDRD9Q8NDG6 1382 aaKnown RBP31.81■■■□□ 2.68
FOXD4L3-201ENST00000342833 GAPVD1Q14C86 1478 aa31.8■■■□□ 2.68
FOXD4L3-201ENST00000342833 ZEB1P37275 1124 aaPredicted RBP31.75■■■□□ 2.67
FOXD4L3-201ENST00000342833 CTTNBP2Q8WZ74 1663 aa31.68■■■□□ 2.66
FOXD4L3-201ENST00000342833 WDR62O43379 1518 aa31.65■■■□□ 2.66
FOXD4L3-201ENST00000342833 PBRM1Q86U86 1689 aa31.59■■■□□ 2.65
FOXD4L3-201ENST00000342833 EFCAB5A4FU69 1503 aa31.56■■■□□ 2.64
FOXD4L3-201ENST00000342833 ERCC6Q03468 1493 aa31.56■■■□□ 2.64
FOXD4L3-201ENST00000342833 IFT140Q96RY7 1462 aa31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms