RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 DCAF8L2P0C7V8 631 aa28.16■■■□□ 2.1
ARHGEF28-201ENST00000296794 NISCHQ9Y2I1 1504 aa27.15■■□□□ 1.94
ARHGEF28-201ENST00000296794 SUPT5HO00267 1087 aaKnown RBP26.63■■□□□ 1.85
ARHGEF28-201ENST00000296794 SHROOM4Q9ULL8 1493 aa26.22■■□□□ 1.79
ARHGEF28-201ENST00000296794 EHMT2Q96KQ7 1210 aa25.55■■□□□ 1.68
ARHGEF28-201ENST00000296794 PCGF6Q9BYE7 350 aa25.25■■□□□ 1.63
ARHGEF28-201ENST00000296794 FAM9AQ8IZU1 332 aaPredicted RBP25.05■■□□□ 1.6
ARHGEF28-201ENST00000296794 APLP2Q06481 763 aa25.03■■□□□ 1.6
ARHGEF28-201ENST00000296794 PELP1Q8IZL8 1130 aaKnown RBP24.95■■□□□ 1.58
ARHGEF28-201ENST00000296794 TTBK1Q5TCY1 1321 aaPredicted RBP24.76■■□□□ 1.55
ARHGEF28-201ENST00000296794 ZEB1P37275 1124 aaPredicted RBP24.69■■□□□ 1.54
ARHGEF28-201ENST00000296794 TRIM41Q8WV44 630 aa24.63■■□□□ 1.53
ARHGEF28-201ENST00000296794 CENPBP07199 599 aaPredicted RBP24.52■■□□□ 1.52
ARHGEF28-201ENST00000296794 CCER1Q8TC90 406 aaPredicted RBP24.51■■□□□ 1.51
ARHGEF28-201ENST00000296794 RANGAP1P46060 587 aaPredicted RBP24.39■■□□□ 1.5
ARHGEF28-201ENST00000296794 ATP1B4Q9UN42 357 aaPredicted RBP24.28■■□□□ 1.48
ARHGEF28-201ENST00000296794 HRCP23327 699 aa24.28■■□□□ 1.48
ARHGEF28-201ENST00000296794 TRIM26Q12899 539 aaPredicted RBP24.2■■□□□ 1.46
ARHGEF28-201ENST00000296794 UBTFP17480 764 aaKnown RBP24.18■■□□□ 1.46
ARHGEF28-201ENST00000296794 PPARGC1BQ86YN6 1023 aaKnown RBP24.1■■□□□ 1.45
ARHGEF28-201ENST00000296794 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.45
ARHGEF28-201ENST00000296794 YTHDC1Q96MU7 727 aaKnown RBP24.04■■□□□ 1.44
ARHGEF28-201ENST00000296794 LOC105371045A0A1W2PR82 267 aa24■■□□□ 1.43
ARHGEF28-201ENST00000296794 ERICH6Q7L0X2 663 aa23.91■■□□□ 1.42
ARHGEF28-201ENST00000296794 MYT1Q01538 1121 aa23.76■■□□□ 1.39
ARHGEF28-201ENST00000296794 NEFLP07196 543 aa23.74■■□□□ 1.39
ARHGEF28-201ENST00000296794 ABCC9O60706 1549 aa23.63■■□□□ 1.37
ARHGEF28-201ENST00000296794 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.61■■□□□ 1.37
ARHGEF28-201ENST00000296794 HNRNPUL2Q1KMD3 747 aaKnown RBP23.61■■□□□ 1.37
ARHGEF28-201ENST00000296794 MYT1LQ9UL68 1186 aa23.54■■□□□ 1.36
ARHGEF28-201ENST00000296794 PABPN1Q86U42 306 aaKnown RBP eCLIP23.5■■□□□ 1.35
ARHGEF28-201ENST00000296794 ITGAEP38570 1179 aa23.42■■□□□ 1.34
ARHGEF28-201ENST00000296794 DIEXFQ68CQ4 756 aaKnown RBP23.35■■□□□ 1.33
ARHGEF28-201ENST00000296794 POLR3GLQ9BT43 218 aa23.03■■□□□ 1.28
ARHGEF28-201ENST00000296794 GTF3C3Q9Y5Q9 886 aa23.01■■□□□ 1.27
ARHGEF28-201ENST00000296794 FBLN2P98095 1184 aa22.91■■□□□ 1.26
ARHGEF28-201ENST00000296794 CNGB1Q14028 1251 aaPredicted RBP22.9■■□□□ 1.26
ARHGEF28-201ENST00000296794 DAXXQ9UER7 740 aaPredicted RBP22.83■■□□□ 1.25
ARHGEF28-201ENST00000296794 FAM50AQ14320 339 aaKnown RBP22.83■■□□□ 1.24
ARHGEF28-201ENST00000296794 ZNF316A6NFI3 1004 aaPredicted RBP22.82■■□□□ 1.24
ARHGEF28-201ENST00000296794 ACIN1Q9UKV3 1341 aaKnown RBP22.77■■□□□ 1.24
ARHGEF28-201ENST00000296794 NEUROD1Q13562 356 aa22.74■■□□□ 1.23
ARHGEF28-201ENST00000296794 BCANQ96GW7 911 aa22.71■■□□□ 1.23
ARHGEF28-201ENST00000296794 DCAF1Q9Y4B6 1507 aa22.69■■□□□ 1.22
ARHGEF28-201ENST00000296794 SLC4A1APQ9BWU0 796 aaKnown RBP22.69■■□□□ 1.22
ARHGEF28-201ENST00000296794 TRIM52Q96A61 297 aa22.65■■□□□ 1.22
ARHGEF28-201ENST00000296794 CSRNP3Q8WYN3 585 aa22.61■■□□□ 1.21
ARHGEF28-201ENST00000296794 ZCCHC6Q5VYS8 1495 aaKnown RBP22.59■■□□□ 1.21
ARHGEF28-201ENST00000296794 ANP32CO43423 234 aa22.58■■□□□ 1.2
ARHGEF28-201ENST00000296794 RTL5Q5HYW3 569 aaPredicted RBP22.56■■□□□ 1.2
ARHGEF28-201ENST00000296794 SCRIBQ14160 1630 aa22.46■■□□□ 1.19
ARHGEF28-201ENST00000296794 P3H3Q8IVL6 736 aa22.43■■□□□ 1.18
ARHGEF28-201ENST00000296794 CDK11AQ9UQ88 783 aaPredicted RBP22.42■■□□□ 1.18
ARHGEF28-201ENST00000296794 ARID3CA6NKF2 412 aa22.38■■□□□ 1.17
ARHGEF28-201ENST00000296794 CLSPNQ9HAW4 1339 aa22.38■■□□□ 1.17
ARHGEF28-201ENST00000296794 MYO15BQ96JP2 1530 aa22.35■■□□□ 1.17
ARHGEF28-201ENST00000296794 ZNF326Q5BKZ1 582 aaKnown RBP22.34■■□□□ 1.17
ARHGEF28-201ENST00000296794 NPM1P06748 294 aaKnown RBP eCLIP22.27■■□□□ 1.16
ARHGEF28-201ENST00000296794 ZNF777Q9ULD5 760 aaPredicted RBP22.25■■□□□ 1.15
ARHGEF28-201ENST00000296794 SCAF1Q9H7N4 1312 aaKnown RBP22.25■■□□□ 1.15
ARHGEF28-201ENST00000296794 ESF1Q9H501 851 aaKnown RBP22.21■■□□□ 1.15
ARHGEF28-201ENST00000296794 FKBP8Q14318 412 aa22.16■■□□□ 1.14
ARHGEF28-201ENST00000296794 DDX10Q13206 875 aaKnown RBP22.08■■□□□ 1.13
ARHGEF28-201ENST00000296794 MIER1Q8N108 512 aa22.05■■□□□ 1.12
ARHGEF28-201ENST00000296794 TONSLQ96HA7 1378 aa22.05■■□□□ 1.12
ARHGEF28-201ENST00000296794 CCDC180Q9P1Z9 1646 aa22.04■■□□□ 1.12
ARHGEF28-201ENST00000296794 ANP32AP39687 249 aaKnown RBP22■■□□□ 1.11
ARHGEF28-201ENST00000296794 CHMP7Q8WUX9 453 aaPredicted RBP22■■□□□ 1.11
ARHGEF28-201ENST00000296794 HNRNPUQ00839 825 aaKnown RBP eCLIP21.99■■□□□ 1.11
ARHGEF28-201ENST00000296794 RB1CC1Q8TDY2 1594 aa21.99■■□□□ 1.11
ARHGEF28-201ENST00000296794 STAG3Q9UJ98 1225 aa21.97■■□□□ 1.11
ARHGEF28-201ENST00000296794 NEFMP07197 916 aa21.95■■□□□ 1.1
ARHGEF28-201ENST00000296794 RSF1Q96T23 1441 aaPredicted RBP21.93■■□□□ 1.1
ARHGEF28-201ENST00000296794 CHGAP10645 457 aaKnown RBP21.92■■□□□ 1.1
ARHGEF28-201ENST00000296794 CLIP1P30622 1438 aa21.9■■□□□ 1.1
ARHGEF28-201ENST00000296794 CANXP27824 592 aaKnown RBP21.89■■□□□ 1.1
ARHGEF28-201ENST00000296794 SLC24A1O60721 1099 aa21.89■■□□□ 1.09
ARHGEF28-201ENST00000296794 NPM2Q86SE8 214 aaKnown RBP21.89■■□□□ 1.09
ARHGEF28-201ENST00000296794 FAM9BQ8IZU0 186 aa21.87■■□□□ 1.09
ARHGEF28-201ENST00000296794 PLPPR3Q6T4P5 718 aa21.87■■□□□ 1.09
ARHGEF28-201ENST00000296794 CEP162Q5TB80 1403 aa21.86■■□□□ 1.09
ARHGEF28-201ENST00000296794 ZBTB47Q9UFB7 747 aaPredicted RBP21.84■■□□□ 1.09
ARHGEF28-201ENST00000296794 TSPY4P0CV99 314 aa21.81■■□□□ 1.08
ARHGEF28-201ENST00000296794 TSPY10P0CW01 314 aa21.81■■□□□ 1.08
ARHGEF28-201ENST00000296794 CHIC2Q9UKJ5 165 aa21.76■■□□□ 1.07
ARHGEF28-201ENST00000296794 EEA1Q15075 1411 aa21.75■■□□□ 1.07
ARHGEF28-201ENST00000296794 GOLGA3Q08378 1498 aa21.75■■□□□ 1.07
ARHGEF28-201ENST00000296794 HIRIP3Q9BW71 556 aaPredicted RBP21.74■■□□□ 1.07
ARHGEF28-201ENST00000296794 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.73■■□□□ 1.071e-6■■□□□ 13.1
ARHGEF28-201ENST00000296794 NACADO15069 1562 aa21.72■■□□□ 1.07
ARHGEF28-201ENST00000296794 MTUS2Q5JR59 1369 aa21.7■■□□□ 1.07
ARHGEF28-201ENST00000296794 MRS2Q9HD23 443 aa21.69■■□□□ 1.06
ARHGEF28-201ENST00000296794 CCDC136Q96JN2 1154 aa21.68■■□□□ 1.06
ARHGEF28-201ENST00000296794 BCL11AQ9H165 835 aa21.68■■□□□ 1.06
ARHGEF28-201ENST00000296794 IRX6P78412 446 aaPredicted RBP21.67■■□□□ 1.06
ARHGEF28-201ENST00000296794 SALL2Q9Y467 1007 aaPredicted RBP21.66■■□□□ 1.06
ARHGEF28-201ENST00000296794 TNIKQ9UKE5 1360 aa21.66■■□□□ 1.06
ARHGEF28-201ENST00000296794 TMC1Q8TDI8 760 aa21.65■■□□□ 1.06
ARHGEF28-201ENST00000296794 BAZ1BQ9UIG0 1483 aaKnown RBP21.62■■□□□ 1.05
ARHGEF28-201ENST00000296794 PLEKHD1A6NEE1 506 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms