RNA–Protein interactions for RNA: ENST00000372099.10

GTF3C5-203, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 5 BASIC

Gene GTF3C5, Length 1,999 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-203ENST00000372099 NISCHQ9Y2I1 1504 aa45.9■■■■■ 4.94
GTF3C5-203ENST00000372099 CCDC180Q9P1Z9 1646 aa40.16■■■■■ 4.02
GTF3C5-203ENST00000372099 ABCC9O60706 1549 aa38.61■■■■□ 3.77
GTF3C5-203ENST00000372099 ZCCHC6Q5VYS8 1495 aaKnown RBP38.43■■■■□ 3.74
GTF3C5-203ENST00000372099 DCAF8L2P0C7V8 631 aa38.24■■■■□ 3.71
GTF3C5-203ENST00000372099 DCAF1Q9Y4B6 1507 aa37.86■■■■□ 3.65
GTF3C5-203ENST00000372099 MYO15BQ96JP2 1530 aa37.59■■■■□ 3.61
GTF3C5-203ENST00000372099 NACADO15069 1562 aa37.56■■■■□ 3.6
GTF3C5-203ENST00000372099 RB1CC1Q8TDY2 1594 aa37.37■■■■□ 3.57
GTF3C5-203ENST00000372099 SHROOM4Q9ULL8 1493 aa37.22■■■■□ 3.55
GTF3C5-203ENST00000372099 SCRIBQ14160 1630 aa36.99■■■■□ 3.51
GTF3C5-203ENST00000372099 UNC13AQ9UPW8 1703 aa36.68■■■■□ 3.46
GTF3C5-203ENST00000372099 PABPN1Q86U42 306 aaKnown RBP eCLIP36.38■■■■□ 3.421e-8■■■□□ 15.2
GTF3C5-203ENST00000372099 BICRAQ9NZM4 1560 aa36.34■■■■□ 3.41
GTF3C5-203ENST00000372099 CECR2Q9BXF3 1484 aa35.8■■■■□ 3.32
GTF3C5-203ENST00000372099 SUPT5HO00267 1087 aaKnown RBP35.56■■■■□ 3.28
GTF3C5-203ENST00000372099 MROH2BQ7Z745 1585 aa35.49■■■■□ 3.27
GTF3C5-203ENST00000372099 RSF1Q96T23 1441 aaPredicted RBP35.45■■■■□ 3.27
GTF3C5-203ENST00000372099 BAZ1AQ9NRL2 1556 aaPredicted RBP35.44■■■■□ 3.26
GTF3C5-203ENST00000372099 SMARCA4P51532 1647 aa35.38■■■■□ 3.25
GTF3C5-203ENST00000372099 EIF4G1Q04637 1599 aaKnown RBP35.26■■■■□ 3.24
GTF3C5-203ENST00000372099 WIZO95785 1651 aa35.18■■■■□ 3.22
GTF3C5-203ENST00000372099 ATAD2BQ9ULI0 1458 aa34.96■■■■□ 3.19
GTF3C5-203ENST00000372099 PEG3Q9GZU2 1588 aa34.93■■■■□ 3.18
GTF3C5-203ENST00000372099 CC2D2AQ9P2K1 1620 aa34.89■■■■□ 3.18
GTF3C5-203ENST00000372099 SMARCA2P51531 1590 aa34.85■■■■□ 3.17
GTF3C5-203ENST00000372099 NCAPD3P42695 1498 aa34.72■■■■□ 3.15
GTF3C5-203ENST00000372099 TOP2AP11388 1531 aaKnown RBP34.71■■■■□ 3.15
GTF3C5-203ENST00000372099 BAZ1BQ9UIG0 1483 aaKnown RBP34.7■■■■□ 3.15
GTF3C5-203ENST00000372099 DNAJC5BQ9UF47 199 aa34.65■■■■□ 3.14
GTF3C5-203ENST00000372099 HMGXB3Q12766 1538 aa34.57■■■■□ 3.12
GTF3C5-203ENST00000372099 CCDC88BA6NC98 1476 aa34.43■■■■□ 3.1
GTF3C5-203ENST00000372099 CFTRP13569 1480 aa33.82■■■■□ 3
GTF3C5-203ENST00000372099 CADPSQ9ULU8 1353 aa33.82■■■■□ 3
GTF3C5-203ENST00000372099 NESP48681 1621 aa33.77■■■■□ 3
GTF3C5-203ENST00000372099 CHIC1Q5VXU3 224 aa33.73■■■□□ 2.99
GTF3C5-203ENST00000372099 LAMC3Q9Y6N6 1575 aa33.58■■■□□ 2.97
GTF3C5-203ENST00000372099 ABCC8Q09428 1581 aa33.57■■■□□ 2.96
GTF3C5-203ENST00000372099 PRDM2Q13029 1718 aa33.53■■■□□ 2.96
GTF3C5-203ENST00000372099 FANCD2Q9BXW9 1451 aa33.44■■■□□ 2.94
GTF3C5-203ENST00000372099 TRIM41Q8WV44 630 aa33.4■■■□□ 2.94
GTF3C5-203ENST00000372099 PDS5BQ9NTI5 1447 aa33.36■■■□□ 2.93
GTF3C5-203ENST00000372099 WRNQ14191 1432 aaPredicted RBP eCLIP33.35■■■□□ 2.931e-6■■■■■ 58.5
GTF3C5-203ENST00000372099 KIF21AQ7Z4S6 1674 aa33.29■■■□□ 2.92
GTF3C5-203ENST00000372099 SYNJ1O43426 1573 aa33.26■■■□□ 2.91
GTF3C5-203ENST00000372099 CEP164Q9UPV0 1460 aa33.25■■■□□ 2.91
GTF3C5-203ENST00000372099 CUX1P39880 1505 aa33.2■■■□□ 2.91
GTF3C5-203ENST00000372099 TOP2BQ02880 1626 aa33.12■■■□□ 2.89
GTF3C5-203ENST00000372099 ERCC6Q03468 1493 aa33.1■■■□□ 2.89
GTF3C5-203ENST00000372099 URB2Q14146 1524 aaKnown RBP33.08■■■□□ 2.89
GTF3C5-203ENST00000372099 BIVM-ERCC5R4GMW8 1640 aa33.07■■■□□ 2.88
GTF3C5-203ENST00000372099 TOPBP1Q92547 1522 aa33.02■■■□□ 2.88
GTF3C5-203ENST00000372099 DNMBPQ6XZF7 1577 aa33■■■□□ 2.87
GTF3C5-203ENST00000372099 MRC2Q9UBG0 1479 aa32.96■■■□□ 2.87
GTF3C5-203ENST00000372099 FGD5Q6ZNL6 1462 aa32.91■■■□□ 2.86
GTF3C5-203ENST00000372099 FAM9AQ8IZU1 332 aaPredicted RBP32.87■■■□□ 2.85
GTF3C5-203ENST00000372099 SOGA1O94964 1423 aa32.85■■■□□ 2.85
GTF3C5-203ENST00000372099 THOC2Q8NI27 1593 aaKnown RBP32.84■■■□□ 2.85
GTF3C5-203ENST00000372099 POLA1P09884 1462 aaPredicted RBP32.83■■■□□ 2.85
GTF3C5-203ENST00000372099 WDR62O43379 1518 aa32.81■■■□□ 2.84
GTF3C5-203ENST00000372099 RUSC2Q8N2Y8 1516 aa32.79■■■□□ 2.84
GTF3C5-203ENST00000372099 RAD54L2Q9Y4B4 1467 aa32.77■■■□□ 2.84
GTF3C5-203ENST00000372099 CUX2O14529 1486 aa32.66■■■□□ 2.82
GTF3C5-203ENST00000372099 TARBP1Q13395 1621 aaKnown RBP32.57■■■□□ 2.8
GTF3C5-203ENST00000372099 ABCA10Q8WWZ4 1543 aa32.57■■■□□ 2.8
GTF3C5-203ENST00000372099 KIF27Q86VH2 1401 aa32.53■■■□□ 2.8
GTF3C5-203ENST00000372099 CSRNP3Q8WYN3 585 aa32.52■■■□□ 2.8
GTF3C5-203ENST00000372099 TDRD9Q8NDG6 1382 aaKnown RBP32.51■■■□□ 2.8
GTF3C5-203ENST00000372099 LOC105371045A0A1W2PR82 267 aa32.5■■■□□ 2.79
GTF3C5-203ENST00000372099 EEA1Q15075 1411 aa32.5■■■□□ 2.79
GTF3C5-203ENST00000372099 WDR97A6NE52 1622 aa32.49■■■□□ 2.79
GTF3C5-203ENST00000372099 EHMT2Q96KQ7 1210 aa32.49■■■□□ 2.79
GTF3C5-203ENST00000372099 IFT140Q96RY7 1462 aa32.47■■■□□ 2.79
GTF3C5-203ENST00000372099 ZNF608Q9ULD9 1512 aaPredicted RBP32.42■■■□□ 2.78
GTF3C5-203ENST00000372099 AQRO60306 1485 aaKnown RBP eCLIP32.39■■■□□ 2.782e-7■■■■■ 34.1
GTF3C5-203ENST00000372099 IGF1RP08069 1367 aa32.37■■■□□ 2.77
GTF3C5-203ENST00000372099 ABCA5Q8WWZ7 1642 aa32.34■■■□□ 2.77
GTF3C5-203ENST00000372099 GAPVD1Q14C86 1478 aa32.34■■■□□ 2.77
GTF3C5-203ENST00000372099 EIF4G3O43432 1585 aaKnown RBP32.22■■■□□ 2.75
GTF3C5-203ENST00000372099 PRXQ9BXM0 1461 aa32.2■■■□□ 2.75
GTF3C5-203ENST00000372099 RAPGEF2Q9Y4G8 1499 aa32.17■■■□□ 2.74
GTF3C5-203ENST00000372099 CARMIL1Q5VZK9 1371 aa32.17■■■□□ 2.74
GTF3C5-203ENST00000372099 ERICH3Q5RHP9 1530 aa32.16■■■□□ 2.74
GTF3C5-203ENST00000372099 PBRM1Q86U86 1689 aa32.16■■■□□ 2.74
GTF3C5-203ENST00000372099 KIF21BO75037 1637 aa32.14■■■□□ 2.74
GTF3C5-203ENST00000372099 GRIN2BQ13224 1484 aa32.14■■■□□ 2.74
GTF3C5-203ENST00000372099 GOLGA3Q08378 1498 aa32.08■■■□□ 2.73
GTF3C5-203ENST00000372099 UBTFP17480 764 aaKnown RBP32.08■■■□□ 2.73
GTF3C5-203ENST00000372099 CUL7Q14999 1698 aa32.04■■■□□ 2.72
GTF3C5-203ENST00000372099 SNAPC4Q5SXM2 1469 aa32.01■■■□□ 2.72
GTF3C5-203ENST00000372099 FHAD1B1AJZ9 1412 aa31.95■■■□□ 2.7
GTF3C5-203ENST00000372099 ADAMTS12P58397 1594 aa31.95■■■□□ 2.7
GTF3C5-203ENST00000372099 TNIKQ9UKE5 1360 aa31.91■■■□□ 2.7
GTF3C5-203ENST00000372099 MAGI1Q96QZ7 1491 aaPredicted RBP31.9■■■□□ 2.7
GTF3C5-203ENST00000372099 FBLN2P98095 1184 aa31.86■■■□□ 2.69
GTF3C5-203ENST00000372099 CHMP7Q8WUX9 453 aaPredicted RBP31.83■■■□□ 2.69
GTF3C5-203ENST00000372099 RANGAP1P46060 587 aaPredicted RBP31.81■■■□□ 2.68
GTF3C5-203ENST00000372099 SYNJ2O15056 1496 aa31.81■■■□□ 2.68
GTF3C5-203ENST00000372099 GRIN2AQ12879 1464 aa31.76■■■□□ 2.67
GTF3C5-203ENST00000372099 CEP162Q5TB80 1403 aa31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms