RNA–Protein interactions for RNA: ENST00000586569.2

TNFRSF11A-202, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 8,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-202ENST00000586569 DCAF8L2P0C7V8 631 aa24.53■■□□□ 1.52
TNFRSF11A-202ENST00000586569 PELP1Q8IZL8 1130 aaKnown RBP24.08■■□□□ 1.45
TNFRSF11A-202ENST00000586569 ERICH6Q7L0X2 663 aa23.36■■□□□ 1.33
TNFRSF11A-202ENST00000586569 EHMT2Q96KQ7 1210 aa23.29■■□□□ 1.32
TNFRSF11A-202ENST00000586569 SUPT5HO00267 1087 aaKnown RBP23.17■■□□□ 1.3
TNFRSF11A-202ENST00000586569 CCER1Q8TC90 406 aaPredicted RBP23■■□□□ 1.27
TNFRSF11A-202ENST00000586569 APLP2Q06481 763 aa22.82■■□□□ 1.24
TNFRSF11A-202ENST00000586569 MYT1Q01538 1121 aa22.68■■□□□ 1.22
TNFRSF11A-202ENST00000586569 TTBK1Q5TCY1 1321 aaPredicted RBP22.56■■□□□ 1.2
TNFRSF11A-202ENST00000586569 CENPBP07199 599 aaPredicted RBP22.56■■□□□ 1.2
TNFRSF11A-202ENST00000586569 FAM9AQ8IZU1 332 aaPredicted RBP22.45■■□□□ 1.18
TNFRSF11A-202ENST00000586569 SHROOM4Q9ULL8 1493 aa22.39■■□□□ 1.17
TNFRSF11A-202ENST00000586569 PCGF6Q9BYE7 350 aa22.36■■□□□ 1.17
TNFRSF11A-202ENST00000586569 NEFLP07196 543 aa22.33■■□□□ 1.16
TNFRSF11A-202ENST00000586569 DAXXQ9UER7 740 aaPredicted RBP22.14■■□□□ 1.13
TNFRSF11A-202ENST00000586569 YTHDC1Q96MU7 727 aaKnown RBP22.13■■□□□ 1.13
TNFRSF11A-202ENST00000586569 RANGAP1P46060 587 aaPredicted RBP22.09■■□□□ 1.13
TNFRSF11A-202ENST00000586569 ATP1B4Q9UN42 357 aaPredicted RBP22.06■■□□□ 1.12
TNFRSF11A-202ENST00000586569 ZEB1P37275 1124 aaPredicted RBP21.9■■□□□ 1.1
TNFRSF11A-202ENST00000586569 POLR3GLQ9BT43 218 aa21.58■■□□□ 1.04
TNFRSF11A-202ENST00000586569 ZNF316A6NFI3 1004 aaPredicted RBP21.54■■□□□ 1.04
TNFRSF11A-202ENST00000586569 RTL5Q5HYW3 569 aaPredicted RBP21.49■■□□□ 1.03
TNFRSF11A-202ENST00000586569 CNGB1Q14028 1251 aaPredicted RBP21.44■■□□□ 1.02
TNFRSF11A-202ENST00000586569 UBTFP17480 764 aaKnown RBP21.42■■□□□ 1.02
TNFRSF11A-202ENST00000586569 CLSPNQ9HAW4 1339 aa21.4■■□□□ 1.02
TNFRSF11A-202ENST00000586569 MYT1LQ9UL68 1186 aa21.38■■□□□ 1.01
TNFRSF11A-202ENST00000586569 SLC4A1APQ9BWU0 796 aaKnown RBP21.31■■□□□ 1
TNFRSF11A-202ENST00000586569 TRIM41Q8WV44 630 aa21.29■■□□□ 1
TNFRSF11A-202ENST00000586569 PPARGC1BQ86YN6 1023 aaKnown RBP21.26■□□□□ 0.99
TNFRSF11A-202ENST00000586569 CHIC1Q5VXU3 224 aa21.23■□□□□ 0.99
TNFRSF11A-202ENST00000586569 ITGAEP38570 1179 aa21.12■□□□□ 0.97
TNFRSF11A-202ENST00000586569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.01■□□□□ 0.95
TNFRSF11A-202ENST00000586569 HNRNPUL2Q1KMD3 747 aaKnown RBP21.01■□□□□ 0.95
TNFRSF11A-202ENST00000586569 BCL11AQ9H165 835 aa20.89■□□□□ 0.93
TNFRSF11A-202ENST00000586569 ZBTB47Q9UFB7 747 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF11A-202ENST00000586569 HRCP23327 699 aa20.87■□□□□ 0.93
TNFRSF11A-202ENST00000586569 TRIM26Q12899 539 aaPredicted RBP20.81■□□□□ 0.92
TNFRSF11A-202ENST00000586569 SLC24A1O60721 1099 aa20.78■□□□□ 0.92
TNFRSF11A-202ENST00000586569 BCANQ96GW7 911 aa20.74■□□□□ 0.91
TNFRSF11A-202ENST00000586569 EIF5BO60841 1220 aaKnown RBP20.74■□□□□ 0.91
TNFRSF11A-202ENST00000586569 CDK11AQ9UQ88 783 aaPredicted RBP20.67■□□□□ 0.9
TNFRSF11A-202ENST00000586569 NISCHQ9Y2I1 1504 aa20.65■□□□□ 0.9
TNFRSF11A-202ENST00000586569 DIEXFQ68CQ4 756 aaKnown RBP20.59■□□□□ 0.89
TNFRSF11A-202ENST00000586569 CANXP27824 592 aaKnown RBP20.57■□□□□ 0.88
TNFRSF11A-202ENST00000586569 ANP32BQ92688 251 aaKnown RBP20.53■□□□□ 0.88
TNFRSF11A-202ENST00000586569 GLIPR1L2Q4G1C9 344 aa20.49■□□□□ 0.87
TNFRSF11A-202ENST00000586569 ANP32AP39687 249 aaKnown RBP20.43■□□□□ 0.86
TNFRSF11A-202ENST00000586569 NPM2Q86SE8 214 aaKnown RBP20.42■□□□□ 0.86
TNFRSF11A-202ENST00000586569 GTF3C3Q9Y5Q9 886 aa20.4■□□□□ 0.86
TNFRSF11A-202ENST00000586569 TRIM52Q96A61 297 aa20.37■□□□□ 0.85
TNFRSF11A-202ENST00000586569 NEUROD1Q13562 356 aa20.37■□□□□ 0.85
TNFRSF11A-202ENST00000586569 HSP90AA1P07900 732 aaKnown RBP20.35■□□□□ 0.85
TNFRSF11A-202ENST00000586569 FAM50AQ14320 339 aaKnown RBP20.34■□□□□ 0.85
TNFRSF11A-202ENST00000586569 ANP32CO43423 234 aa20.33■□□□□ 0.85
TNFRSF11A-202ENST00000586569 NEFMP07197 916 aa20.32■□□□□ 0.84
TNFRSF11A-202ENST00000586569 ZNF326Q5BKZ1 582 aaKnown RBP20.32■□□□□ 0.84
TNFRSF11A-202ENST00000586569 LOC105371045A0A1W2PR82 267 aa20.2■□□□□ 0.82
TNFRSF11A-202ENST00000586569 ARXQ96QS3 562 aa20.19■□□□□ 0.82
TNFRSF11A-202ENST00000586569 CDK11BP21127 795 aaKnown RBP20.14■□□□□ 0.81
TNFRSF11A-202ENST00000586569 UPF2Q9HAU5 1272 aaKnown RBP20.08■□□□□ 0.81
TNFRSF11A-202ENST00000586569 NBR1Q14596 966 aa20.05■□□□□ 0.8
TNFRSF11A-202ENST00000586569 TNNT2P45379 298 aaPredicted RBP19.85■□□□□ 0.77
TNFRSF11A-202ENST00000586569 FKBP8Q14318 412 aa19.84■□□□□ 0.77
TNFRSF11A-202ENST00000586569 SALL2Q9Y467 1007 aaPredicted RBP19.77■□□□□ 0.76
TNFRSF11A-202ENST00000586569 TULP1O00294 542 aaPredicted RBP19.76■□□□□ 0.75
TNFRSF11A-202ENST00000586569 TRIM44Q96DX7 344 aaPredicted RBP19.75■□□□□ 0.75
TNFRSF11A-202ENST00000586569 ACIN1Q9UKV3 1341 aaKnown RBP19.74■□□□□ 0.75
TNFRSF11A-202ENST00000586569 PLPPR3Q6T4P5 718 aa19.71■□□□□ 0.75
TNFRSF11A-202ENST00000586569 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.68■□□□□ 0.74
TNFRSF11A-202ENST00000586569 A0A0G2JS52 829 aa19.66■□□□□ 0.74
TNFRSF11A-202ENST00000586569 CCDC136Q96JN2 1154 aa19.65■□□□□ 0.74
TNFRSF11A-202ENST00000586569 NCLP19338 710 aaKnown RBP19.64■□□□□ 0.74
TNFRSF11A-202ENST00000586569 DNTTIP2Q5QJE6 756 aaKnown RBP19.64■□□□□ 0.74
TNFRSF11A-202ENST00000586569 FAM9BQ8IZU0 186 aa19.64■□□□□ 0.73
TNFRSF11A-202ENST00000586569 FBLN2P98095 1184 aa19.63■□□□□ 0.73
TNFRSF11A-202ENST00000586569 HNRNPUQ00839 825 aaKnown RBP eCLIP19.63■□□□□ 0.73
TNFRSF11A-202ENST00000586569 STAG3Q9UJ98 1225 aa19.61■□□□□ 0.73
TNFRSF11A-202ENST00000586569 ESF1Q9H501 851 aaKnown RBP19.6■□□□□ 0.73
TNFRSF11A-202ENST00000586569 TPRNQ4KMQ1 711 aa19.6■□□□□ 0.73
TNFRSF11A-202ENST00000586569 SCAF1Q9H7N4 1312 aaKnown RBP19.59■□□□□ 0.73
TNFRSF11A-202ENST00000586569 PTMAP06454 111 aaKnown RBP19.59■□□□□ 0.73
TNFRSF11A-202ENST00000586569 CHGAP10645 457 aaKnown RBP19.59■□□□□ 0.73
TNFRSF11A-202ENST00000586569 ZRSR1Q15695 479 aaKnown RBP19.57■□□□□ 0.72
TNFRSF11A-202ENST00000586569 MYH16Q9H6N6 1097 aa19.56■□□□□ 0.72
TNFRSF11A-202ENST00000586569 AMER1Q5JTC6 1135 aaPredicted RBP19.55■□□□□ 0.72
TNFRSF11A-202ENST00000586569 ARID3CA6NKF2 412 aa19.55■□□□□ 0.72
TNFRSF11A-202ENST00000586569 NCBP3Q53F19 620 aaKnown RBP19.52■□□□□ 0.72
TNFRSF11A-202ENST00000586569 ZNF777Q9ULD5 760 aaPredicted RBP19.51■□□□□ 0.71
TNFRSF11A-202ENST00000586569 GOLGA6L22H0YM25 854 aa19.48■□□□□ 0.71
TNFRSF11A-202ENST00000586569 BECN1Q14457 450 aa19.47■□□□□ 0.71
TNFRSF11A-202ENST00000586569 NAP1L5Q96NT1 182 aaPredicted RBP19.47■□□□□ 0.71
TNFRSF11A-202ENST00000586569 TMC1Q8TDI8 760 aa19.46■□□□□ 0.71
TNFRSF11A-202ENST00000586569 WDR43Q15061 677 aaKnown RBP eCLIP19.46■□□□□ 0.71
TNFRSF11A-202ENST00000586569 ANP32EQ9BTT0 268 aa19.42■□□□□ 0.7
TNFRSF11A-202ENST00000586569 IRX6P78412 446 aaPredicted RBP19.41■□□□□ 0.7
TNFRSF11A-202ENST00000586569 PLEKHG5O94827 1062 aa19.41■□□□□ 0.7
TNFRSF11A-202ENST00000586569 DDRGK1Q96HY6 314 aa19.4■□□□□ 0.7
TNFRSF11A-202ENST00000586569 TAOK2Q9UL54 1235 aa19.4■□□□□ 0.7
TNFRSF11A-202ENST00000586569 P3H3Q8IVL6 736 aa19.39■□□□□ 0.69
TNFRSF11A-202ENST00000586569 ZBTB7CA1YPR0 619 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms