RNA–Protein interactions for RNA: ENST00000528053.5

BACE1-211, Transcript of beta-secretase 1, humanhuman

TSL 5 BASIC

Gene BACE1, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BACE1-211ENST00000528053 NISCHQ9Y2I1 1504 aa28.89■■■□□ 2.22
BACE1-211ENST00000528053 SUPT5HO00267 1087 aaKnown RBP27.78■■■□□ 2.04
BACE1-211ENST00000528053 DCAF8L2P0C7V8 631 aa27.65■■■□□ 2.02
BACE1-211ENST00000528053 SHROOM4Q9ULL8 1493 aa27.59■■■□□ 2.01
BACE1-211ENST00000528053 PCGF6Q9BYE7 350 aa26.85■■□□□ 1.89
BACE1-211ENST00000528053 EHMT2Q96KQ7 1210 aa26.57■■□□□ 1.84
BACE1-211ENST00000528053 HRCP23327 699 aa26.22■■□□□ 1.79
BACE1-211ENST00000528053 PPARGC1BQ86YN6 1023 aaKnown RBP26.19■■□□□ 1.78
BACE1-211ENST00000528053 FAM9AQ8IZU1 332 aaPredicted RBP26.05■■□□□ 1.76
BACE1-211ENST00000528053 CHIC1Q5VXU3 224 aa25.86■■□□□ 1.73
BACE1-211ENST00000528053 LOC105371045A0A1W2PR82 267 aa25.85■■□□□ 1.73
BACE1-211ENST00000528053 TTBK1Q5TCY1 1321 aaPredicted RBP25.73■■□□□ 1.71
BACE1-211ENST00000528053 TRIM26Q12899 539 aaPredicted RBP25.46■■□□□ 1.67
BACE1-211ENST00000528053 TRIM41Q8WV44 630 aa25.42■■□□□ 1.66
BACE1-211ENST00000528053 ZEB1P37275 1124 aaPredicted RBP25.37■■□□□ 1.65
BACE1-211ENST00000528053 CCER1Q8TC90 406 aaPredicted RBP25.32■■□□□ 1.64
BACE1-211ENST00000528053 PELP1Q8IZL8 1130 aaKnown RBP25.3■■□□□ 1.64
BACE1-211ENST00000528053 YTHDC1Q96MU7 727 aaKnown RBP25.13■■□□□ 1.61
BACE1-211ENST00000528053 CENPBP07199 599 aaPredicted RBP25.1■■□□□ 1.61
BACE1-211ENST00000528053 MYO15BQ96JP2 1530 aa24.94■■□□□ 1.58
BACE1-211ENST00000528053 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.94■■□□□ 1.58
BACE1-211ENST00000528053 RANGAP1P46060 587 aaPredicted RBP24.88■■□□□ 1.57
BACE1-211ENST00000528053 APLP2Q06481 763 aa24.68■■□□□ 1.54
BACE1-211ENST00000528053 UBTFP17480 764 aaKnown RBP24.66■■□□□ 1.54
BACE1-211ENST00000528053 GTF3C3Q9Y5Q9 886 aa24.63■■□□□ 1.53
BACE1-211ENST00000528053 DIEXFQ68CQ4 756 aaKnown RBP24.62■■□□□ 1.53
BACE1-211ENST00000528053 SCAF1Q9H7N4 1312 aaKnown RBP24.58■■□□□ 1.53
BACE1-211ENST00000528053 HNRNPUL2Q1KMD3 747 aaKnown RBP24.45■■□□□ 1.5
BACE1-211ENST00000528053 ACIN1Q9UKV3 1341 aaKnown RBP24.41■■□□□ 1.5
BACE1-211ENST00000528053 DCAF1Q9Y4B6 1507 aa24.39■■□□□ 1.49
BACE1-211ENST00000528053 NEUROD1Q13562 356 aa24.34■■□□□ 1.49
BACE1-211ENST00000528053 MYT1Q01538 1121 aa24.33■■□□□ 1.49
BACE1-211ENST00000528053 ZCCHC6Q5VYS8 1495 aaKnown RBP24.2■■□□□ 1.47
BACE1-211ENST00000528053 ITGAEP38570 1179 aa24.08■■□□□ 1.44
BACE1-211ENST00000528053 ZNF316A6NFI3 1004 aaPredicted RBP23.99■■□□□ 1.43
BACE1-211ENST00000528053 ATP1B4Q9UN42 357 aaPredicted RBP23.97■■□□□ 1.43
BACE1-211ENST00000528053 BCANQ96GW7 911 aa23.88■■□□□ 1.41
BACE1-211ENST00000528053 ERICH6Q7L0X2 663 aa23.85■■□□□ 1.41
BACE1-211ENST00000528053 NEFLP07196 543 aa23.84■■□□□ 1.41
BACE1-211ENST00000528053 MIER1Q8N108 512 aa23.73■■□□□ 1.39
BACE1-211ENST00000528053 CCDC180Q9P1Z9 1646 aa23.71■■□□□ 1.39
BACE1-211ENST00000528053 CSRNP3Q8WYN3 585 aa23.55■■□□□ 1.36
BACE1-211ENST00000528053 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
BACE1-211ENST00000528053 CNGB1Q14028 1251 aaPredicted RBP23.51■■□□□ 1.35
BACE1-211ENST00000528053 ABCC9O60706 1549 aa23.5■■□□□ 1.35
BACE1-211ENST00000528053 RSF1Q96T23 1441 aaPredicted RBP23.49■■□□□ 1.35
BACE1-211ENST00000528053 PABPN1Q86U42 306 aaKnown RBP eCLIP23.41■■□□□ 1.34
BACE1-211ENST00000528053 FAM50AQ14320 339 aaKnown RBP23.3■■□□□ 1.32
BACE1-211ENST00000528053 FKBP8Q14318 412 aa23.28■■□□□ 1.32
BACE1-211ENST00000528053 POLR3GLQ9BT43 218 aa23.24■■□□□ 1.31
BACE1-211ENST00000528053 DDX10Q13206 875 aaKnown RBP23.19■■□□□ 1.3
BACE1-211ENST00000528053 CEP162Q5TB80 1403 aa23.17■■□□□ 1.3
BACE1-211ENST00000528053 HIRIP3Q9BW71 556 aaPredicted RBP23.15■■□□□ 1.3
BACE1-211ENST00000528053 TRIM52Q96A61 297 aa23.14■■□□□ 1.3
BACE1-211ENST00000528053 RB1CC1Q8TDY2 1594 aa23.09■■□□□ 1.29
BACE1-211ENST00000528053 ANP32CO43423 234 aa23.08■■□□□ 1.29
BACE1-211ENST00000528053 P3H3Q8IVL6 736 aa23.03■■□□□ 1.28
BACE1-211ENST00000528053 SUPT16HQ9Y5B9 1047 aaKnown RBP23.03■■□□□ 1.28
BACE1-211ENST00000528053 CECR2Q9BXF3 1484 aa23.02■■□□□ 1.28
BACE1-211ENST00000528053 IRX6P78412 446 aaPredicted RBP22.98■■□□□ 1.27
BACE1-211ENST00000528053 CDK11AQ9UQ88 783 aaPredicted RBP22.95■■□□□ 1.26
BACE1-211ENST00000528053 SOGA1O94964 1423 aa22.92■■□□□ 1.26
BACE1-211ENST00000528053 CLIP1P30622 1438 aa22.91■■□□□ 1.26
BACE1-211ENST00000528053 ANP32EQ9BTT0 268 aa22.89■■□□□ 1.25
BACE1-211ENST00000528053 TNIKQ9UKE5 1360 aa22.85■■□□□ 1.25
BACE1-211ENST00000528053 CLSPNQ9HAW4 1339 aa22.85■■□□□ 1.25
BACE1-211ENST00000528053 HNRNPUQ00839 825 aaKnown RBP eCLIP22.85■■□□□ 1.25
BACE1-211ENST00000528053 CCDC88BA6NC98 1476 aa22.75■■□□□ 1.23
BACE1-211ENST00000528053 RTL5Q5HYW3 569 aaPredicted RBP22.75■■□□□ 1.23
BACE1-211ENST00000528053 ABCC8Q09428 1581 aa22.74■■□□□ 1.23
BACE1-211ENST00000528053 KCNH8Q96L42 1107 aa22.72■■□□□ 1.23
BACE1-211ENST00000528053 TSHZ2Q9NRE2 1034 aa22.72■■□□□ 1.23
BACE1-211ENST00000528053 MROH2BQ7Z745 1585 aa22.71■■□□□ 1.23
BACE1-211ENST00000528053 GOLGA3Q08378 1498 aa22.71■■□□□ 1.23
BACE1-211ENST00000528053 SIN3AQ96ST3 1273 aa22.7■■□□□ 1.22
BACE1-211ENST00000528053 ZNF326Q5BKZ1 582 aaKnown RBP22.7■■□□□ 1.22
BACE1-211ENST00000528053 FAM9BQ8IZU0 186 aa22.68■■□□□ 1.22
BACE1-211ENST00000528053 SENP3-EIF4A1A0A087X0R7 540 aa22.67■■□□□ 1.22
BACE1-211ENST00000528053 ARID3CA6NKF2 412 aa22.67■■□□□ 1.22
BACE1-211ENST00000528053 NBR1Q14596 966 aa22.66■■□□□ 1.22
BACE1-211ENST00000528053 BCL11AQ9H165 835 aa22.64■■□□□ 1.21
BACE1-211ENST00000528053 TONSLQ96HA7 1378 aa22.58■■□□□ 1.21
BACE1-211ENST00000528053 WRNQ14191 1432 aaPredicted RBP eCLIP22.58■■□□□ 1.2
BACE1-211ENST00000528053 KANK4Q5T7N3 995 aaPredicted RBP22.57■■□□□ 1.2
BACE1-211ENST00000528053 NPM2Q86SE8 214 aaKnown RBP22.57■■□□□ 1.2
BACE1-211ENST00000528053 DAXXQ9UER7 740 aaPredicted RBP22.57■■□□□ 1.2
BACE1-211ENST00000528053 RBM19Q9Y4C8 960 aaKnown RBP22.54■■□□□ 1.2
BACE1-211ENST00000528053 RUSC2Q8N2Y8 1516 aa22.54■■□□□ 1.2
BACE1-211ENST00000528053 EEA1Q15075 1411 aa22.54■■□□□ 1.2
BACE1-211ENST00000528053 CHIC2Q9UKJ5 165 aa22.49■■□□□ 1.19
BACE1-211ENST00000528053 WIZO95785 1651 aa22.48■■□□□ 1.19
BACE1-211ENST00000528053 SALL2Q9Y467 1007 aaPredicted RBP22.46■■□□□ 1.19
BACE1-211ENST00000528053 CEP164Q9UPV0 1460 aa22.45■■□□□ 1.18
BACE1-211ENST00000528053 MRS2Q9HD23 443 aa22.41■■□□□ 1.18
BACE1-211ENST00000528053 ANP32AP39687 249 aaKnown RBP22.4■■□□□ 1.18
BACE1-211ENST00000528053 VPS8Q8N3P4 1428 aa22.38■■□□□ 1.17
BACE1-211ENST00000528053 B4GALNT3Q6L9W6 998 aa22.33■■□□□ 1.17
BACE1-211ENST00000528053 CCDC136Q96JN2 1154 aa22.33■■□□□ 1.16
BACE1-211ENST00000528053 CCNB3Q8WWL7 1395 aa22.3■■□□□ 1.16
BACE1-211ENST00000528053 RRP7BPQ9NSQ0 103 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms