Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SFTPBP07988 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.31■□□□□ 0.36
SFTPBP07988 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.31■□□□□ 0.36
SFTPBP07988 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.31■□□□□ 0.36
SFTPBP07988 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.31■□□□□ 0.36
SFTPBP07988 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SFTPBP07988 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SFTPBP07988 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.31■□□□□ 0.36
SFTPBP07988 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.31■□□□□ 0.36
SFTPBP07988 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.31■□□□□ 0.36
SFTPBP07988 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SFTPBP07988 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SFTPBP07988 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SFTPBP07988 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SFTPBP07988 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
SFTPBP07988 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SFTPBP07988 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SFTPBP07988 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SFTPBP07988 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.3■□□□□ 0.36
SFTPBP07988 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SFTPBP07988 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SFTPBP07988 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.3■□□□□ 0.36
SFTPBP07988 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.3■□□□□ 0.36
SFTPBP07988 CROCCP5-201ENST00000436658 830 ntBASIC17.3■□□□□ 0.36
SFTPBP07988 AC006970.2-201ENST00000450065 779 ntBASIC17.3■□□□□ 0.36
SFTPBP07988 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SFTPBP07988 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SFTPBP07988 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.3■□□□□ 0.36
SFTPBP07988 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SFTPBP07988 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.3■□□□□ 0.36
SFTPBP07988 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SFTPBP07988 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SFTPBP07988 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SFTPBP07988 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SFTPBP07988 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SFTPBP07988 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.3■□□□□ 0.36
SFTPBP07988 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SFTPBP07988 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SFTPBP07988 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SFTPBP07988 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SFTPBP07988 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.29■□□□□ 0.36
SFTPBP07988 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.29■□□□□ 0.36
SFTPBP07988 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SFTPBP07988 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SFTPBP07988 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.29■□□□□ 0.36
SFTPBP07988 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SFTPBP07988 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SFTPBP07988 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.29■□□□□ 0.36
SFTPBP07988 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SFTPBP07988 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SFTPBP07988 ID1-201ENST00000376105 1233 ntBASIC17.29■□□□□ 0.36
SFTPBP07988 MIR663A-201ENST00000385250 93 ntBASIC17.29■□□□□ 0.36
SFTPBP07988 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SFTPBP07988 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SFTPBP07988 AC007322.3-201ENST00000426526 701 ntBASIC17.29■□□□□ 0.36
SFTPBP07988 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.29■□□□□ 0.36
SFTPBP07988 DUX4L16-201ENST00000555130 1264 ntBASIC17.29■□□□□ 0.36
SFTPBP07988 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.29■□□□□ 0.36
SFTPBP07988 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SFTPBP07988 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SFTPBP07988 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SFTPBP07988 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SFTPBP07988 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.29■□□□□ 0.36
SFTPBP07988 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.29■□□□□ 0.36
SFTPBP07988 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.29■□□□□ 0.36
SFTPBP07988 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
SFTPBP07988 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SFTPBP07988 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.29■□□□□ 0.36
SFTPBP07988 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SFTPBP07988 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.29■□□□□ 0.36
SFTPBP07988 SMG8-203ENST00000578922 2178 ntBASIC17.29■□□□□ 0.36
SFTPBP07988 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SFTPBP07988 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SFTPBP07988 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SFTPBP07988 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SFTPBP07988 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SFTPBP07988 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.28■□□□□ 0.36
SFTPBP07988 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SFTPBP07988 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SFTPBP07988 HLA-L-209ENST00000420110 1011 ntBASIC17.28■□□□□ 0.36
SFTPBP07988 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.28■□□□□ 0.36
SFTPBP07988 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.28■□□□□ 0.36
SFTPBP07988 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SFTPBP07988 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.28■□□□□ 0.36
SFTPBP07988 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.28■□□□□ 0.36
SFTPBP07988 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.28■□□□□ 0.36
SFTPBP07988 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SFTPBP07988 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.28■□□□□ 0.36
SFTPBP07988 AC090340.1-201ENST00000620778 4980 ntBASIC17.28■□□□□ 0.36
SFTPBP07988 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SFTPBP07988 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SFTPBP07988 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SFTPBP07988 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SFTPBP07988 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.28■□□□□ 0.36
SFTPBP07988 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SFTPBP07988 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.28■□□□□ 0.36
SFTPBP07988 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.27■□□□□ 0.36
SFTPBP07988 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SFTPBP07988 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SFTPBP07988 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms