RNA–Protein interactions for RNA: ENST00000624949.1

PCDHB12-203, Transcript of protocadherin beta 12, humanhuman

TSL 2 BASIC

Gene PCDHB12, Length 1,963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-203ENST00000624949 NISCHQ9Y2I1 1504 aa46.98■■■■■ 5.11
PCDHB12-203ENST00000624949 CCDC180Q9P1Z9 1646 aa41.14■■■■■ 4.18
PCDHB12-203ENST00000624949 ABCC9O60706 1549 aa39.39■■■■□ 3.9
PCDHB12-203ENST00000624949 ZCCHC6Q5VYS8 1495 aaKnown RBP39.36■■■■□ 3.89
PCDHB12-203ENST00000624949 DCAF8L2P0C7V8 631 aa39.1■■■■□ 3.85
PCDHB12-203ENST00000624949 DCAF1Q9Y4B6 1507 aa38.78■■■■□ 3.8
PCDHB12-203ENST00000624949 MYO15BQ96JP2 1530 aa38.47■■■■□ 3.75
PCDHB12-203ENST00000624949 NACADO15069 1562 aa38.43■■■■□ 3.74
PCDHB12-203ENST00000624949 RB1CC1Q8TDY2 1594 aa38.23■■■■□ 3.71
PCDHB12-203ENST00000624949 SHROOM4Q9ULL8 1493 aa38.14■■■■□ 3.7
PCDHB12-203ENST00000624949 SCRIBQ14160 1630 aa37.86■■■■□ 3.65
PCDHB12-203ENST00000624949 UNC13AQ9UPW8 1703 aa37.46■■■■□ 3.59
PCDHB12-203ENST00000624949 PABPN1Q86U42 306 aaKnown RBP eCLIP37.09■■■■□ 3.53
PCDHB12-203ENST00000624949 BICRAQ9NZM4 1560 aa37.07■■■■□ 3.53
PCDHB12-203ENST00000624949 CECR2Q9BXF3 1484 aa36.58■■■■□ 3.45
PCDHB12-203ENST00000624949 SUPT5HO00267 1087 aaKnown RBP36.48■■■■□ 3.43
PCDHB12-203ENST00000624949 BAZ1AQ9NRL2 1556 aaPredicted RBP36.31■■■■□ 3.4
PCDHB12-203ENST00000624949 MROH2BQ7Z745 1585 aa36.31■■■■□ 3.4
PCDHB12-203ENST00000624949 RSF1Q96T23 1441 aaPredicted RBP36.29■■■■□ 3.4
PCDHB12-203ENST00000624949 SMARCA4P51532 1647 aa36.22■■■■□ 3.39
PCDHB12-203ENST00000624949 EIF4G1Q04637 1599 aaKnown RBP36.01■■■■□ 3.36
PCDHB12-203ENST00000624949 WIZO95785 1651 aa36.01■■■■□ 3.35
PCDHB12-203ENST00000624949 PEG3Q9GZU2 1588 aa35.74■■■■□ 3.31
PCDHB12-203ENST00000624949 ATAD2BQ9ULI0 1458 aa35.73■■■■□ 3.31
PCDHB12-203ENST00000624949 SMARCA2P51531 1590 aa35.68■■■■□ 3.3
PCDHB12-203ENST00000624949 CC2D2AQ9P2K1 1620 aa35.6■■■■□ 3.29
PCDHB12-203ENST00000624949 TOP2AP11388 1531 aaKnown RBP35.58■■■■□ 3.29
PCDHB12-203ENST00000624949 BAZ1BQ9UIG0 1483 aaKnown RBP35.52■■■■□ 3.28
PCDHB12-203ENST00000624949 NCAPD3P42695 1498 aa35.47■■■■□ 3.27
PCDHB12-203ENST00000624949 HMGXB3Q12766 1538 aa35.37■■■■□ 3.25
PCDHB12-203ENST00000624949 CCDC88BA6NC98 1476 aa35.23■■■■□ 3.23
PCDHB12-203ENST00000624949 DNAJC5BQ9UF47 199 aa35.13■■■■□ 3.21
PCDHB12-203ENST00000624949 CHIC1Q5VXU3 224 aa34.62■■■■□ 3.13
PCDHB12-203ENST00000624949 CFTRP13569 1480 aa34.58■■■■□ 3.13
PCDHB12-203ENST00000624949 CADPSQ9ULU8 1353 aa34.56■■■■□ 3.12
PCDHB12-203ENST00000624949 NESP48681 1621 aa34.44■■■■□ 3.1
PCDHB12-203ENST00000624949 ABCC8Q09428 1581 aa34.39■■■■□ 3.1
PCDHB12-203ENST00000624949 PRDM2Q13029 1718 aa34.37■■■■□ 3.09
PCDHB12-203ENST00000624949 LAMC3Q9Y6N6 1575 aa34.35■■■■□ 3.09
PCDHB12-203ENST00000624949 TRIM41Q8WV44 630 aa34.3■■■■□ 3.08
PCDHB12-203ENST00000624949 FANCD2Q9BXW9 1451 aa34.19■■■■□ 3.06
PCDHB12-203ENST00000624949 WRNQ14191 1432 aaPredicted RBP eCLIP34.19■■■■□ 3.06
PCDHB12-203ENST00000624949 PDS5BQ9NTI5 1447 aa34.11■■■■□ 3.05
PCDHB12-203ENST00000624949 SYNJ1O43426 1573 aa34.07■■■■□ 3.04
PCDHB12-203ENST00000624949 CEP164Q9UPV0 1460 aa34.02■■■■□ 3.04
PCDHB12-203ENST00000624949 KIF21AQ7Z4S6 1674 aa34.01■■■■□ 3.03
PCDHB12-203ENST00000624949 CUX1P39880 1505 aa33.97■■■■□ 3.03
PCDHB12-203ENST00000624949 TOP2BQ02880 1626 aa33.94■■■■□ 3.02
PCDHB12-203ENST00000624949 BIVM-ERCC5R4GMW8 1640 aa33.9■■■■□ 3.02
PCDHB12-203ENST00000624949 ERCC6Q03468 1493 aa33.82■■■■□ 3
PCDHB12-203ENST00000624949 DNMBPQ6XZF7 1577 aa33.79■■■■□ 3
PCDHB12-203ENST00000624949 URB2Q14146 1524 aaKnown RBP33.78■■■■□ 3
PCDHB12-203ENST00000624949 TOPBP1Q92547 1522 aa33.77■■■■□ 3
PCDHB12-203ENST00000624949 FAM9AQ8IZU1 332 aaPredicted RBP33.72■■■□□ 2.99
PCDHB12-203ENST00000624949 MRC2Q9UBG0 1479 aa33.7■■■□□ 2.99
PCDHB12-203ENST00000624949 FGD5Q6ZNL6 1462 aa33.68■■■□□ 2.98
PCDHB12-203ENST00000624949 SOGA1O94964 1423 aa33.65■■■□□ 2.98
PCDHB12-203ENST00000624949 POLA1P09884 1462 aaPredicted RBP33.57■■■□□ 2.96
PCDHB12-203ENST00000624949 RUSC2Q8N2Y8 1516 aa33.55■■■□□ 2.96
PCDHB12-203ENST00000624949 THOC2Q8NI27 1593 aaKnown RBP33.53■■■□□ 2.96
PCDHB12-203ENST00000624949 WDR62O43379 1518 aa33.52■■■□□ 2.96
PCDHB12-203ENST00000624949 RAD54L2Q9Y4B4 1467 aa33.49■■■□□ 2.95
PCDHB12-203ENST00000624949 EEA1Q15075 1411 aa33.42■■■□□ 2.94
PCDHB12-203ENST00000624949 CUX2O14529 1486 aa33.39■■■□□ 2.94
PCDHB12-203ENST00000624949 KIF27Q86VH2 1401 aa33.36■■■□□ 2.93
PCDHB12-203ENST00000624949 LOC105371045A0A1W2PR82 267 aa33.34■■■□□ 2.93
PCDHB12-203ENST00000624949 CSRNP3Q8WYN3 585 aa33.34■■■□□ 2.93
PCDHB12-203ENST00000624949 ABCA10Q8WWZ4 1543 aa33.33■■■□□ 2.93
PCDHB12-203ENST00000624949 EHMT2Q96KQ7 1210 aa33.32■■■□□ 2.93
PCDHB12-203ENST00000624949 TARBP1Q13395 1621 aaKnown RBP33.28■■■□□ 2.92
PCDHB12-203ENST00000624949 WDR97A6NE52 1622 aa33.27■■■□□ 2.92
PCDHB12-203ENST00000624949 IFT140Q96RY7 1462 aa33.21■■■□□ 2.91
PCDHB12-203ENST00000624949 TDRD9Q8NDG6 1382 aaKnown RBP33.21■■■□□ 2.91
PCDHB12-203ENST00000624949 ABCA5Q8WWZ7 1642 aa33.11■■■□□ 2.89
PCDHB12-203ENST00000624949 IGF1RP08069 1367 aa33.1■■■□□ 2.89
PCDHB12-203ENST00000624949 GAPVD1Q14C86 1478 aa33.09■■■□□ 2.89
PCDHB12-203ENST00000624949 ZNF608Q9ULD9 1512 aaPredicted RBP33.09■■■□□ 2.89
PCDHB12-203ENST00000624949 AQRO60306 1485 aaKnown RBP eCLIP33.07■■■□□ 2.88
PCDHB12-203ENST00000624949 KIF21BO75037 1637 aa33.03■■■□□ 2.88
PCDHB12-203ENST00000624949 PRXQ9BXM0 1461 aa32.99■■■□□ 2.87
PCDHB12-203ENST00000624949 GOLGA3Q08378 1498 aa32.98■■■□□ 2.87
PCDHB12-203ENST00000624949 RAPGEF2Q9Y4G8 1499 aa32.97■■■□□ 2.87
PCDHB12-203ENST00000624949 EIF4G3O43432 1585 aaKnown RBP32.95■■■□□ 2.87
PCDHB12-203ENST00000624949 CARMIL1Q5VZK9 1371 aa32.94■■■□□ 2.86
PCDHB12-203ENST00000624949 ERICH3Q5RHP9 1530 aa32.94■■■□□ 2.86
PCDHB12-203ENST00000624949 PBRM1Q86U86 1689 aa32.94■■■□□ 2.86
PCDHB12-203ENST00000624949 UBTFP17480 764 aaKnown RBP32.94■■■□□ 2.86
PCDHB12-203ENST00000624949 GRIN2BQ13224 1484 aa32.89■■■□□ 2.85
PCDHB12-203ENST00000624949 CUL7Q14999 1698 aa32.87■■■□□ 2.85
PCDHB12-203ENST00000624949 TNIKQ9UKE5 1360 aa32.77■■■□□ 2.84
PCDHB12-203ENST00000624949 SNAPC4Q5SXM2 1469 aa32.75■■■□□ 2.83
PCDHB12-203ENST00000624949 ADAMTS12P58397 1594 aa32.72■■■□□ 2.83
PCDHB12-203ENST00000624949 FHAD1B1AJZ9 1412 aa32.7■■■□□ 2.83
PCDHB12-203ENST00000624949 MAGI1Q96QZ7 1491 aaPredicted RBP32.64■■■□□ 2.82
PCDHB12-203ENST00000624949 RANGAP1P46060 587 aaPredicted RBP32.61■■■□□ 2.81
PCDHB12-203ENST00000624949 CEP162Q5TB80 1403 aa32.61■■■□□ 2.81
PCDHB12-203ENST00000624949 FBLN2P98095 1184 aa32.55■■■□□ 2.8
PCDHB12-203ENST00000624949 CHMP7Q8WUX9 453 aaPredicted RBP32.54■■■□□ 2.8
PCDHB12-203ENST00000624949 SYNJ2O15056 1496 aa32.53■■■□□ 2.8
PCDHB12-203ENST00000624949 GRIN2AQ12879 1464 aa32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms