RNA–Protein interactions for RNA: ENST00000589272.5

RTBDN-207, Transcript of retbindin, humanhuman

TSL 2 BASIC

Gene RTBDN, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTBDN-207ENST00000589272 NISCHQ9Y2I1 1504 aa44.68■■■■■ 4.74
RTBDN-207ENST00000589272 CCDC180Q9P1Z9 1646 aa38.7■■■■□ 3.79
RTBDN-207ENST00000589272 ZCCHC6Q5VYS8 1495 aaKnown RBP37.65■■■■□ 3.62
RTBDN-207ENST00000589272 DCAF1Q9Y4B6 1507 aa36.87■■■■□ 3.49
RTBDN-207ENST00000589272 SHROOM4Q9ULL8 1493 aa36.85■■■■□ 3.49
RTBDN-207ENST00000589272 DCAF8L2P0C7V8 631 aa36.7■■■■□ 3.47
RTBDN-207ENST00000589272 ABCC9O60706 1549 aa36.28■■■■□ 3.4
RTBDN-207ENST00000589272 MYO15BQ96JP2 1530 aa36.24■■■■□ 3.39
RTBDN-207ENST00000589272 NACADO15069 1562 aa35.9■■■■□ 3.34
RTBDN-207ENST00000589272 SCRIBQ14160 1630 aa35.76■■■■□ 3.32
RTBDN-207ENST00000589272 SUPT5HO00267 1087 aaKnown RBP35.6■■■■□ 3.29
RTBDN-207ENST00000589272 RB1CC1Q8TDY2 1594 aa35.5■■■■□ 3.27
RTBDN-207ENST00000589272 UNC13AQ9UPW8 1703 aa34.98■■■■□ 3.19
RTBDN-207ENST00000589272 RSF1Q96T23 1441 aaPredicted RBP34.86■■■■□ 3.17
RTBDN-207ENST00000589272 CECR2Q9BXF3 1484 aa34.77■■■■□ 3.16
RTBDN-207ENST00000589272 MROH2BQ7Z745 1585 aa34.61■■■■□ 3.13
RTBDN-207ENST00000589272 BICRAQ9NZM4 1560 aa34.58■■■■□ 3.13
RTBDN-207ENST00000589272 BAZ1AQ9NRL2 1556 aaPredicted RBP34.41■■■■□ 3.1
RTBDN-207ENST00000589272 WIZO95785 1651 aa34.36■■■■□ 3.09
RTBDN-207ENST00000589272 CHIC1Q5VXU3 224 aa34.34■■■■□ 3.09
RTBDN-207ENST00000589272 PABPN1Q86U42 306 aaKnown RBP eCLIP34.32■■■■□ 3.08
RTBDN-207ENST00000589272 SMARCA4P51532 1647 aa34.27■■■■□ 3.08
RTBDN-207ENST00000589272 TOP2AP11388 1531 aaKnown RBP33.93■■■■□ 3.02
RTBDN-207ENST00000589272 PEG3Q9GZU2 1588 aa33.8■■■■□ 3
RTBDN-207ENST00000589272 SMARCA2P51531 1590 aa33.68■■■□□ 2.98
RTBDN-207ENST00000589272 EIF4G1Q04637 1599 aaKnown RBP33.67■■■□□ 2.98
RTBDN-207ENST00000589272 CCDC88BA6NC98 1476 aa33.63■■■□□ 2.97
RTBDN-207ENST00000589272 ATAD2BQ9ULI0 1458 aa33.58■■■□□ 2.97
RTBDN-207ENST00000589272 BAZ1BQ9UIG0 1483 aaKnown RBP33.38■■■□□ 2.93
RTBDN-207ENST00000589272 TRIM41Q8WV44 630 aa33.36■■■□□ 2.93
RTBDN-207ENST00000589272 HMGXB3Q12766 1538 aa33.17■■■□□ 2.9
RTBDN-207ENST00000589272 NCAPD3P42695 1498 aa33.16■■■□□ 2.9
RTBDN-207ENST00000589272 ABCC8Q09428 1581 aa33.13■■■□□ 2.89
RTBDN-207ENST00000589272 LOC105371045A0A1W2PR82 267 aa33.09■■■□□ 2.89
RTBDN-207ENST00000589272 FAM9AQ8IZU1 332 aaPredicted RBP32.87■■■□□ 2.85
RTBDN-207ENST00000589272 CC2D2AQ9P2K1 1620 aa32.84■■■□□ 2.85
RTBDN-207ENST00000589272 WRNQ14191 1432 aaPredicted RBP eCLIP32.74■■■□□ 2.83
RTBDN-207ENST00000589272 SYNJ1O43426 1573 aa32.7■■■□□ 2.83
RTBDN-207ENST00000589272 CFTRP13569 1480 aa32.58■■■□□ 2.81
RTBDN-207ENST00000589272 SOGA1O94964 1423 aa32.57■■■□□ 2.81
RTBDN-207ENST00000589272 RUSC2Q8N2Y8 1516 aa32.48■■■□□ 2.79
RTBDN-207ENST00000589272 PRDM2Q13029 1718 aa32.46■■■□□ 2.79
RTBDN-207ENST00000589272 TOP2BQ02880 1626 aa32.46■■■□□ 2.79
RTBDN-207ENST00000589272 EHMT2Q96KQ7 1210 aa32.44■■■□□ 2.78
RTBDN-207ENST00000589272 BIVM-ERCC5R4GMW8 1640 aa32.43■■■□□ 2.78
RTBDN-207ENST00000589272 EEA1Q15075 1411 aa32.42■■■□□ 2.78
RTBDN-207ENST00000589272 CADPSQ9ULU8 1353 aa32.35■■■□□ 2.77
RTBDN-207ENST00000589272 CUX1P39880 1505 aa32.32■■■□□ 2.76
RTBDN-207ENST00000589272 CSRNP3Q8WYN3 585 aa32.25■■■□□ 2.75
RTBDN-207ENST00000589272 KIF21BO75037 1637 aa32.09■■■□□ 2.73
RTBDN-207ENST00000589272 GOLGA3Q08378 1498 aa32.08■■■□□ 2.73
RTBDN-207ENST00000589272 NESP48681 1621 aa32.06■■■□□ 2.72
RTBDN-207ENST00000589272 TNIKQ9UKE5 1360 aa32.05■■■□□ 2.72
RTBDN-207ENST00000589272 DNAJC5BQ9UF47 199 aa32.03■■■□□ 2.72
RTBDN-207ENST00000589272 FANCD2Q9BXW9 1451 aa32.03■■■□□ 2.72
RTBDN-207ENST00000589272 CEP164Q9UPV0 1460 aa32.02■■■□□ 2.72
RTBDN-207ENST00000589272 PCGF6Q9BYE7 350 aa31.98■■■□□ 2.71
RTBDN-207ENST00000589272 CEP162Q5TB80 1403 aa31.96■■■□□ 2.71
RTBDN-207ENST00000589272 LAMC3Q9Y6N6 1575 aa31.95■■■□□ 2.71
RTBDN-207ENST00000589272 RAPGEF2Q9Y4G8 1499 aa31.88■■■□□ 2.69
RTBDN-207ENST00000589272 UBTFP17480 764 aaKnown RBP31.87■■■□□ 2.69
RTBDN-207ENST00000589272 FGD5Q6ZNL6 1462 aa31.86■■■□□ 2.69
RTBDN-207ENST00000589272 KIF27Q86VH2 1401 aa31.83■■■□□ 2.69
RTBDN-207ENST00000589272 DNMBPQ6XZF7 1577 aa31.82■■■□□ 2.68
RTBDN-207ENST00000589272 PRXQ9BXM0 1461 aa31.81■■■□□ 2.68
RTBDN-207ENST00000589272 TRIM26Q12899 539 aaPredicted RBP31.79■■■□□ 2.68
RTBDN-207ENST00000589272 ERICH3Q5RHP9 1530 aa31.76■■■□□ 2.67
RTBDN-207ENST00000589272 TOPBP1Q92547 1522 aa31.75■■■□□ 2.67
RTBDN-207ENST00000589272 CUX2O14529 1486 aa31.71■■■□□ 2.67
RTBDN-207ENST00000589272 URB2Q14146 1524 aaKnown RBP31.67■■■□□ 2.66
RTBDN-207ENST00000589272 KIF21AQ7Z4S6 1674 aa31.66■■■□□ 2.66
RTBDN-207ENST00000589272 POLA1P09884 1462 aaPredicted RBP31.65■■■□□ 2.66
RTBDN-207ENST00000589272 PDS5BQ9NTI5 1447 aa31.64■■■□□ 2.66
RTBDN-207ENST00000589272 CLIP1P30622 1438 aa31.58■■■□□ 2.65
RTBDN-207ENST00000589272 RAD54L2Q9Y4B4 1467 aa31.58■■■□□ 2.65
RTBDN-207ENST00000589272 IGF1RP08069 1367 aa31.57■■■□□ 2.64
RTBDN-207ENST00000589272 ABCA10Q8WWZ4 1543 aa31.55■■■□□ 2.64
RTBDN-207ENST00000589272 PPARGC1BQ86YN6 1023 aaKnown RBP31.52■■■□□ 2.64
RTBDN-207ENST00000589272 WDR97A6NE52 1622 aa31.49■■■□□ 2.63
RTBDN-207ENST00000589272 HRCP23327 699 aa31.42■■■□□ 2.62
RTBDN-207ENST00000589272 CARMIL1Q5VZK9 1371 aa31.38■■■□□ 2.61
RTBDN-207ENST00000589272 VPS8Q8N3P4 1428 aa31.38■■■□□ 2.61
RTBDN-207ENST00000589272 ABCA5Q8WWZ7 1642 aa31.31■■■□□ 2.6
RTBDN-207ENST00000589272 RANGAP1P46060 587 aaPredicted RBP31.31■■■□□ 2.6
RTBDN-207ENST00000589272 ARAP1Q96P48 1450 aa31.31■■■□□ 2.6
RTBDN-207ENST00000589272 MRC2Q9UBG0 1479 aa31.28■■■□□ 2.6
RTBDN-207ENST00000589272 TARBP1Q13395 1621 aaKnown RBP31.27■■■□□ 2.6
RTBDN-207ENST00000589272 CUL7Q14999 1698 aa31.25■■■□□ 2.59
RTBDN-207ENST00000589272 ARHGAP35Q9NRY4 1499 aa31.2■■■□□ 2.59
RTBDN-207ENST00000589272 TDRD9Q8NDG6 1382 aaKnown RBP31.19■■■□□ 2.58
RTBDN-207ENST00000589272 TTBK1Q5TCY1 1321 aaPredicted RBP31.16■■■□□ 2.58
RTBDN-207ENST00000589272 GAPVD1Q14C86 1478 aa31.16■■■□□ 2.58
RTBDN-207ENST00000589272 WDR62O43379 1518 aa31.13■■■□□ 2.57
RTBDN-207ENST00000589272 CTTNBP2Q8WZ74 1663 aa31.02■■■□□ 2.56
RTBDN-207ENST00000589272 PBRM1Q86U86 1689 aa31.01■■■□□ 2.56
RTBDN-207ENST00000589272 THOC2Q8NI27 1593 aaKnown RBP30.99■■■□□ 2.55
RTBDN-207ENST00000589272 ERCC6Q03468 1493 aa30.96■■■□□ 2.55
RTBDN-207ENST00000589272 IFT140Q96RY7 1462 aa30.94■■■□□ 2.54
RTBDN-207ENST00000589272 AQRO60306 1485 aaKnown RBP eCLIP30.94■■■□□ 2.54
RTBDN-207ENST00000589272 APLP2Q06481 763 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms