RNA–Protein interactions for RNA: ENST00000622978.1

PCDHB12-202, Transcript of protocadherin beta 12, humanhuman

TSL 2 BASIC

Gene PCDHB12, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-202ENST00000622978 NISCHQ9Y2I1 1504 aa44.61■■■■■ 4.73
PCDHB12-202ENST00000622978 CCDC180Q9P1Z9 1646 aa38.7■■■■□ 3.79
PCDHB12-202ENST00000622978 ZCCHC6Q5VYS8 1495 aaKnown RBP37.57■■■■□ 3.61
PCDHB12-202ENST00000622978 DCAF1Q9Y4B6 1507 aa36.85■■■■□ 3.49
PCDHB12-202ENST00000622978 SHROOM4Q9ULL8 1493 aa36.75■■■■□ 3.47
PCDHB12-202ENST00000622978 DCAF8L2P0C7V8 631 aa36.74■■■■□ 3.47
PCDHB12-202ENST00000622978 ABCC9O60706 1549 aa36.26■■■■□ 3.39
PCDHB12-202ENST00000622978 MYO15BQ96JP2 1530 aa36.25■■■■□ 3.39
PCDHB12-202ENST00000622978 NACADO15069 1562 aa35.94■■■■□ 3.34
PCDHB12-202ENST00000622978 SCRIBQ14160 1630 aa35.71■■■■□ 3.31
PCDHB12-202ENST00000622978 SUPT5HO00267 1087 aaKnown RBP35.55■■■■□ 3.28
PCDHB12-202ENST00000622978 RB1CC1Q8TDY2 1594 aa35.55■■■■□ 3.28
PCDHB12-202ENST00000622978 UNC13AQ9UPW8 1703 aa34.88■■■■□ 3.17
PCDHB12-202ENST00000622978 RSF1Q96T23 1441 aaPredicted RBP34.77■■■■□ 3.16
PCDHB12-202ENST00000622978 CECR2Q9BXF3 1484 aa34.64■■■■□ 3.14
PCDHB12-202ENST00000622978 MROH2BQ7Z745 1585 aa34.5■■■■□ 3.11
PCDHB12-202ENST00000622978 BICRAQ9NZM4 1560 aa34.47■■■■□ 3.11
PCDHB12-202ENST00000622978 BAZ1AQ9NRL2 1556 aaPredicted RBP34.42■■■■□ 3.1
PCDHB12-202ENST00000622978 PABPN1Q86U42 306 aaKnown RBP eCLIP34.27■■■■□ 3.08
PCDHB12-202ENST00000622978 WIZO95785 1651 aa34.26■■■■□ 3.07
PCDHB12-202ENST00000622978 SMARCA4P51532 1647 aa34.22■■■■□ 3.07
PCDHB12-202ENST00000622978 CHIC1Q5VXU3 224 aa34.21■■■■□ 3.07
PCDHB12-202ENST00000622978 TOP2AP11388 1531 aaKnown RBP33.9■■■■□ 3.02
PCDHB12-202ENST00000622978 PEG3Q9GZU2 1588 aa33.76■■■□□ 2.99
PCDHB12-202ENST00000622978 SMARCA2P51531 1590 aa33.6■■■□□ 2.97
PCDHB12-202ENST00000622978 CCDC88BA6NC98 1476 aa33.55■■■□□ 2.96
PCDHB12-202ENST00000622978 ATAD2BQ9ULI0 1458 aa33.54■■■□□ 2.96
PCDHB12-202ENST00000622978 EIF4G1Q04637 1599 aaKnown RBP33.5■■■□□ 2.95
PCDHB12-202ENST00000622978 BAZ1BQ9UIG0 1483 aaKnown RBP33.4■■■□□ 2.94
PCDHB12-202ENST00000622978 TRIM41Q8WV44 630 aa33.37■■■□□ 2.93
PCDHB12-202ENST00000622978 HMGXB3Q12766 1538 aa33.17■■■□□ 2.9
PCDHB12-202ENST00000622978 NCAPD3P42695 1498 aa33.15■■■□□ 2.9
PCDHB12-202ENST00000622978 ABCC8Q09428 1581 aa33.02■■■□□ 2.88
PCDHB12-202ENST00000622978 LOC105371045A0A1W2PR82 267 aa32.93■■■□□ 2.86
PCDHB12-202ENST00000622978 CC2D2AQ9P2K1 1620 aa32.81■■■□□ 2.84
PCDHB12-202ENST00000622978 FAM9AQ8IZU1 332 aaPredicted RBP32.8■■■□□ 2.84
PCDHB12-202ENST00000622978 WRNQ14191 1432 aaPredicted RBP eCLIP32.73■■■□□ 2.83
PCDHB12-202ENST00000622978 SYNJ1O43426 1573 aa32.6■■■□□ 2.81
PCDHB12-202ENST00000622978 CFTRP13569 1480 aa32.55■■■□□ 2.8
PCDHB12-202ENST00000622978 EEA1Q15075 1411 aa32.47■■■□□ 2.79
PCDHB12-202ENST00000622978 SOGA1O94964 1423 aa32.46■■■□□ 2.79
PCDHB12-202ENST00000622978 PRDM2Q13029 1718 aa32.45■■■□□ 2.79
PCDHB12-202ENST00000622978 TOP2BQ02880 1626 aa32.41■■■□□ 2.78
PCDHB12-202ENST00000622978 BIVM-ERCC5R4GMW8 1640 aa32.37■■■□□ 2.77
PCDHB12-202ENST00000622978 EHMT2Q96KQ7 1210 aa32.36■■■□□ 2.77
PCDHB12-202ENST00000622978 CADPSQ9ULU8 1353 aa32.35■■■□□ 2.77
PCDHB12-202ENST00000622978 RUSC2Q8N2Y8 1516 aa32.31■■■□□ 2.76
PCDHB12-202ENST00000622978 CSRNP3Q8WYN3 585 aa32.24■■■□□ 2.75
PCDHB12-202ENST00000622978 CUX1P39880 1505 aa32.23■■■□□ 2.75
PCDHB12-202ENST00000622978 GOLGA3Q08378 1498 aa32.07■■■□□ 2.72
PCDHB12-202ENST00000622978 KIF21BO75037 1637 aa32.05■■■□□ 2.72
PCDHB12-202ENST00000622978 FANCD2Q9BXW9 1451 aa32.02■■■□□ 2.72
PCDHB12-202ENST00000622978 CEP164Q9UPV0 1460 aa32.02■■■□□ 2.72
PCDHB12-202ENST00000622978 TNIKQ9UKE5 1360 aa32.02■■■□□ 2.72
PCDHB12-202ENST00000622978 LAMC3Q9Y6N6 1575 aa31.98■■■□□ 2.71
PCDHB12-202ENST00000622978 NESP48681 1621 aa31.96■■■□□ 2.71
PCDHB12-202ENST00000622978 CEP162Q5TB80 1403 aa31.91■■■□□ 2.7
PCDHB12-202ENST00000622978 DNAJC5BQ9UF47 199 aa31.91■■■□□ 2.7
PCDHB12-202ENST00000622978 PCGF6Q9BYE7 350 aa31.9■■■□□ 2.7
PCDHB12-202ENST00000622978 UBTFP17480 764 aaKnown RBP31.9■■■□□ 2.7
PCDHB12-202ENST00000622978 KIF27Q86VH2 1401 aa31.86■■■□□ 2.69
PCDHB12-202ENST00000622978 FGD5Q6ZNL6 1462 aa31.82■■■□□ 2.68
PCDHB12-202ENST00000622978 DNMBPQ6XZF7 1577 aa31.81■■■□□ 2.68
PCDHB12-202ENST00000622978 RAPGEF2Q9Y4G8 1499 aa31.79■■■□□ 2.68
PCDHB12-202ENST00000622978 TRIM26Q12899 539 aaPredicted RBP31.77■■■□□ 2.68
PCDHB12-202ENST00000622978 ERICH3Q5RHP9 1530 aa31.75■■■□□ 2.67
PCDHB12-202ENST00000622978 PRXQ9BXM0 1461 aa31.74■■■□□ 2.67
PCDHB12-202ENST00000622978 TOPBP1Q92547 1522 aa31.72■■■□□ 2.67
PCDHB12-202ENST00000622978 PDS5BQ9NTI5 1447 aa31.72■■■□□ 2.67
PCDHB12-202ENST00000622978 HRCP23327 699 aa31.7■■■□□ 2.67
PCDHB12-202ENST00000622978 CUX2O14529 1486 aa31.7■■■□□ 2.66
PCDHB12-202ENST00000622978 POLA1P09884 1462 aaPredicted RBP31.6■■■□□ 2.65
PCDHB12-202ENST00000622978 KIF21AQ7Z4S6 1674 aa31.59■■■□□ 2.65
PCDHB12-202ENST00000622978 URB2Q14146 1524 aaKnown RBP31.59■■■□□ 2.65
PCDHB12-202ENST00000622978 CLIP1P30622 1438 aa31.57■■■□□ 2.64
PCDHB12-202ENST00000622978 ABCA10Q8WWZ4 1543 aa31.53■■■□□ 2.64
PCDHB12-202ENST00000622978 IGF1RP08069 1367 aa31.51■■■□□ 2.63
PCDHB12-202ENST00000622978 RAD54L2Q9Y4B4 1467 aa31.51■■■□□ 2.63
PCDHB12-202ENST00000622978 WDR97A6NE52 1622 aa31.41■■■□□ 2.62
PCDHB12-202ENST00000622978 PPARGC1BQ86YN6 1023 aaKnown RBP31.39■■■□□ 2.62
PCDHB12-202ENST00000622978 CARMIL1Q5VZK9 1371 aa31.38■■■□□ 2.61
PCDHB12-202ENST00000622978 VPS8Q8N3P4 1428 aa31.35■■■□□ 2.61
PCDHB12-202ENST00000622978 MRC2Q9UBG0 1479 aa31.3■■■□□ 2.6
PCDHB12-202ENST00000622978 RANGAP1P46060 587 aaPredicted RBP31.29■■■□□ 2.6
PCDHB12-202ENST00000622978 CUL7Q14999 1698 aa31.27■■■□□ 2.6
PCDHB12-202ENST00000622978 ABCA5Q8WWZ7 1642 aa31.26■■■□□ 2.59
PCDHB12-202ENST00000622978 TARBP1Q13395 1621 aaKnown RBP31.21■■■□□ 2.59
PCDHB12-202ENST00000622978 ARAP1Q96P48 1450 aa31.2■■■□□ 2.59
PCDHB12-202ENST00000622978 GAPVD1Q14C86 1478 aa31.16■■■□□ 2.58
PCDHB12-202ENST00000622978 TDRD9Q8NDG6 1382 aaKnown RBP31.16■■■□□ 2.58
PCDHB12-202ENST00000622978 WDR62O43379 1518 aa31.12■■■□□ 2.57
PCDHB12-202ENST00000622978 ARHGAP35Q9NRY4 1499 aa31.11■■■□□ 2.57
PCDHB12-202ENST00000622978 TTBK1Q5TCY1 1321 aaPredicted RBP31.09■■■□□ 2.57
PCDHB12-202ENST00000622978 ERCC6Q03468 1493 aa31.05■■■□□ 2.56
PCDHB12-202ENST00000622978 APLP2Q06481 763 aa31.05■■■□□ 2.56
PCDHB12-202ENST00000622978 CTTNBP2Q8WZ74 1663 aa31■■■□□ 2.55
PCDHB12-202ENST00000622978 PBRM1Q86U86 1689 aa30.98■■■□□ 2.55
PCDHB12-202ENST00000622978 IFT140Q96RY7 1462 aa30.98■■■□□ 2.55
PCDHB12-202ENST00000622978 THOC2Q8NI27 1593 aaKnown RBP30.94■■■□□ 2.54
PCDHB12-202ENST00000622978 AQRO60306 1485 aaKnown RBP eCLIP30.89■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms