RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 NISCHQ9Y2I1 1504 aa47.41■■■■■ 5.18
TSSC4-203ENST00000380996 CCDC180Q9P1Z9 1646 aa41.6■■■■■ 4.25
TSSC4-203ENST00000380996 ABCC9O60706 1549 aa39.81■■■■□ 3.96
TSSC4-203ENST00000380996 ZCCHC6Q5VYS8 1495 aaKnown RBP39.71■■■■□ 3.95
TSSC4-203ENST00000380996 DCAF8L2P0C7V8 631 aa39.35■■■■□ 3.89
TSSC4-203ENST00000380996 DCAF1Q9Y4B6 1507 aa39.27■■■■□ 3.88
TSSC4-203ENST00000380996 MYO15BQ96JP2 1530 aa39.05■■■■□ 3.84
TSSC4-203ENST00000380996 NACADO15069 1562 aa38.94■■■■□ 3.82
TSSC4-203ENST00000380996 RB1CC1Q8TDY2 1594 aa38.73■■■■□ 3.79
TSSC4-203ENST00000380996 SHROOM4Q9ULL8 1493 aa38.18■■■■□ 3.7
TSSC4-203ENST00000380996 SCRIBQ14160 1630 aa38.1■■■■□ 3.69
TSSC4-203ENST00000380996 UNC13AQ9UPW8 1703 aa37.71■■■■□ 3.63
TSSC4-203ENST00000380996 BICRAQ9NZM4 1560 aa37.46■■■■□ 3.59
TSSC4-203ENST00000380996 PABPN1Q86U42 306 aaKnown RBP eCLIP37.44■■■■□ 3.58
TSSC4-203ENST00000380996 CECR2Q9BXF3 1484 aa36.81■■■■□ 3.48
TSSC4-203ENST00000380996 BAZ1AQ9NRL2 1556 aaPredicted RBP36.68■■■■□ 3.46
TSSC4-203ENST00000380996 RSF1Q96T23 1441 aaPredicted RBP36.56■■■■□ 3.44
TSSC4-203ENST00000380996 MROH2BQ7Z745 1585 aa36.55■■■■□ 3.44
TSSC4-203ENST00000380996 SMARCA4P51532 1647 aa36.53■■■■□ 3.44
TSSC4-203ENST00000380996 SUPT5HO00267 1087 aaKnown RBP36.51■■■■□ 3.44
TSSC4-203ENST00000380996 EIF4G1Q04637 1599 aaKnown RBP36.43■■■■□ 3.42
TSSC4-203ENST00000380996 DNAJC5BQ9UF47 199 aa36.31■■■■□ 3.4
TSSC4-203ENST00000380996 WIZO95785 1651 aa36.17■■■■□ 3.38
TSSC4-203ENST00000380996 PEG3Q9GZU2 1588 aa36.16■■■■□ 3.38
TSSC4-203ENST00000380996 SMARCA2P51531 1590 aa36.12■■■■□ 3.37
TSSC4-203ENST00000380996 ATAD2BQ9ULI0 1458 aa36.12■■■■□ 3.37
TSSC4-203ENST00000380996 CC2D2AQ9P2K1 1620 aa36.01■■■■□ 3.35
TSSC4-203ENST00000380996 NCAPD3P42695 1498 aa35.95■■■■□ 3.35
TSSC4-203ENST00000380996 BAZ1BQ9UIG0 1483 aaKnown RBP35.9■■■■□ 3.34
TSSC4-203ENST00000380996 TOP2AP11388 1531 aaKnown RBP35.89■■■■□ 3.34
TSSC4-203ENST00000380996 HMGXB3Q12766 1538 aa35.83■■■■□ 3.33
TSSC4-203ENST00000380996 CCDC88BA6NC98 1476 aa35.49■■■■□ 3.27
TSSC4-203ENST00000380996 CADPSQ9ULU8 1353 aa35■■■■□ 3.19
TSSC4-203ENST00000380996 CFTRP13569 1480 aa34.97■■■■□ 3.19
TSSC4-203ENST00000380996 LAMC3Q9Y6N6 1575 aa34.8■■■■□ 3.16
TSSC4-203ENST00000380996 NESP48681 1621 aa34.73■■■■□ 3.15
TSSC4-203ENST00000380996 CHIC1Q5VXU3 224 aa34.67■■■■□ 3.14
TSSC4-203ENST00000380996 PRDM2Q13029 1718 aa34.64■■■■□ 3.14
TSSC4-203ENST00000380996 PDS5BQ9NTI5 1447 aa34.61■■■■□ 3.13
TSSC4-203ENST00000380996 FANCD2Q9BXW9 1451 aa34.56■■■■□ 3.12
TSSC4-203ENST00000380996 ABCC8Q09428 1581 aa34.48■■■■□ 3.11
TSSC4-203ENST00000380996 WRNQ14191 1432 aaPredicted RBP eCLIP34.46■■■■□ 3.11
TSSC4-203ENST00000380996 TRIM41Q8WV44 630 aa34.45■■■■□ 3.11
TSSC4-203ENST00000380996 CEP164Q9UPV0 1460 aa34.42■■■■□ 3.1
TSSC4-203ENST00000380996 KIF21AQ7Z4S6 1674 aa34.28■■■■□ 3.08
TSSC4-203ENST00000380996 ERCC6Q03468 1493 aa34.27■■■■□ 3.08
TSSC4-203ENST00000380996 SYNJ1O43426 1573 aa34.23■■■■□ 3.07
TSSC4-203ENST00000380996 CUX1P39880 1505 aa34.22■■■■□ 3.07
TSSC4-203ENST00000380996 TOP2BQ02880 1626 aa34.2■■■■□ 3.07
TSSC4-203ENST00000380996 BIVM-ERCC5R4GMW8 1640 aa34.15■■■■□ 3.06
TSSC4-203ENST00000380996 MRC2Q9UBG0 1479 aa34.14■■■■□ 3.06
TSSC4-203ENST00000380996 DNMBPQ6XZF7 1577 aa34.14■■■■□ 3.06
TSSC4-203ENST00000380996 URB2Q14146 1524 aaKnown RBP34.11■■■■□ 3.05
TSSC4-203ENST00000380996 TOPBP1Q92547 1522 aa34.1■■■■□ 3.05
TSSC4-203ENST00000380996 FGD5Q6ZNL6 1462 aa33.97■■■■□ 3.03
TSSC4-203ENST00000380996 WDR62O43379 1518 aa33.95■■■■□ 3.03
TSSC4-203ENST00000380996 THOC2Q8NI27 1593 aaKnown RBP33.92■■■■□ 3.02
TSSC4-203ENST00000380996 POLA1P09884 1462 aaPredicted RBP33.89■■■■□ 3.02
TSSC4-203ENST00000380996 SOGA1O94964 1423 aa33.82■■■■□ 3
TSSC4-203ENST00000380996 RAD54L2Q9Y4B4 1467 aa33.74■■■□□ 2.99
TSSC4-203ENST00000380996 EEA1Q15075 1411 aa33.74■■■□□ 2.99
TSSC4-203ENST00000380996 FAM9AQ8IZU1 332 aaPredicted RBP33.71■■■□□ 2.99
TSSC4-203ENST00000380996 ABCA10Q8WWZ4 1543 aa33.69■■■□□ 2.98
TSSC4-203ENST00000380996 CUX2O14529 1486 aa33.69■■■□□ 2.98
TSSC4-203ENST00000380996 KIF27Q86VH2 1401 aa33.68■■■□□ 2.98
TSSC4-203ENST00000380996 IFT140Q96RY7 1462 aa33.66■■■□□ 2.98
TSSC4-203ENST00000380996 RUSC2Q8N2Y8 1516 aa33.62■■■□□ 2.97
TSSC4-203ENST00000380996 TARBP1Q13395 1621 aaKnown RBP33.6■■■□□ 2.97
TSSC4-203ENST00000380996 CSRNP3Q8WYN3 585 aa33.57■■■□□ 2.96
TSSC4-203ENST00000380996 WDR97A6NE52 1622 aa33.52■■■□□ 2.96
TSSC4-203ENST00000380996 TDRD9Q8NDG6 1382 aaKnown RBP33.51■■■□□ 2.95
TSSC4-203ENST00000380996 GAPVD1Q14C86 1478 aa33.43■■■□□ 2.94
TSSC4-203ENST00000380996 IGF1RP08069 1367 aa33.4■■■□□ 2.94
TSSC4-203ENST00000380996 ABCA5Q8WWZ7 1642 aa33.4■■■□□ 2.94
TSSC4-203ENST00000380996 ZNF608Q9ULD9 1512 aaPredicted RBP33.38■■■□□ 2.93
TSSC4-203ENST00000380996 AQRO60306 1485 aaKnown RBP eCLIP33.37■■■□□ 2.93
TSSC4-203ENST00000380996 ERICH3Q5RHP9 1530 aa33.31■■■□□ 2.92
TSSC4-203ENST00000380996 GRIN2BQ13224 1484 aa33.28■■■□□ 2.92
TSSC4-203ENST00000380996 LOC105371045A0A1W2PR82 267 aa33.26■■■□□ 2.91
TSSC4-203ENST00000380996 EIF4G3O43432 1585 aaKnown RBP33.26■■■□□ 2.91
TSSC4-203ENST00000380996 PRXQ9BXM0 1461 aa33.25■■■□□ 2.91
TSSC4-203ENST00000380996 CARMIL1Q5VZK9 1371 aa33.24■■■□□ 2.91
TSSC4-203ENST00000380996 KIF21BO75037 1637 aa33.22■■■□□ 2.91
TSSC4-203ENST00000380996 EHMT2Q96KQ7 1210 aa33.18■■■□□ 2.9
TSSC4-203ENST00000380996 GOLGA3Q08378 1498 aa33.18■■■□□ 2.9
TSSC4-203ENST00000380996 CUL7Q14999 1698 aa33.17■■■□□ 2.9
TSSC4-203ENST00000380996 PBRM1Q86U86 1689 aa33.17■■■□□ 2.9
TSSC4-203ENST00000380996 RAPGEF2Q9Y4G8 1499 aa33.14■■■□□ 2.9
TSSC4-203ENST00000380996 FHAD1B1AJZ9 1412 aa33.09■■■□□ 2.89
TSSC4-203ENST00000380996 UBTFP17480 764 aaKnown RBP33.08■■■□□ 2.89
TSSC4-203ENST00000380996 SNAPC4Q5SXM2 1469 aa33.07■■■□□ 2.88
TSSC4-203ENST00000380996 MAGI1Q96QZ7 1491 aaPredicted RBP33.07■■■□□ 2.88
TSSC4-203ENST00000380996 ADAMTS12P58397 1594 aa33.02■■■□□ 2.88
TSSC4-203ENST00000380996 TNIKQ9UKE5 1360 aa32.98■■■□□ 2.87
TSSC4-203ENST00000380996 SYNJ2O15056 1496 aa32.93■■■□□ 2.86
TSSC4-203ENST00000380996 CHMP7Q8WUX9 453 aaPredicted RBP32.92■■■□□ 2.86
TSSC4-203ENST00000380996 FBLN2P98095 1184 aa32.85■■■□□ 2.85
TSSC4-203ENST00000380996 GRIN2AQ12879 1464 aa32.83■■■□□ 2.85
TSSC4-203ENST00000380996 DNAJC5Q9H3Z4 198 aa32.77■■■□□ 2.84
TSSC4-203ENST00000380996 CEP162Q5TB80 1403 aa32.71■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms