RNA–Protein interactions for RNA: ENST00000620778.1

AC090340.1-201, humanhuman

BASIC

Gene AC090340.1, Length 4,980 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090340.1-201ENST00000620778 DCAF8L2P0C7V8 631 aa30.79■■■□□ 2.52
AC090340.1-201ENST00000620778 SUPT5HO00267 1087 aaKnown RBP29.88■■■□□ 2.37
AC090340.1-201ENST00000620778 NISCHQ9Y2I1 1504 aa29.66■■■□□ 2.34
AC090340.1-201ENST00000620778 SHROOM4Q9ULL8 1493 aa29.17■■■□□ 2.26
AC090340.1-201ENST00000620778 EHMT2Q96KQ7 1210 aa28.75■■■□□ 2.19
AC090340.1-201ENST00000620778 PELP1Q8IZL8 1130 aaKnown RBP28.72■■■□□ 2.19
AC090340.1-201ENST00000620778 PCGF6Q9BYE7 350 aa28.44■■■□□ 2.14
AC090340.1-201ENST00000620778 APLP2Q06481 763 aa28.22■■■□□ 2.11
AC090340.1-201ENST00000620778 FAM9AQ8IZU1 332 aaPredicted RBP28.15■■■□□ 2.1
AC090340.1-201ENST00000620778 ZEB1P37275 1124 aaPredicted RBP27.99■■■□□ 2.07
AC090340.1-201ENST00000620778 CENPBP07199 599 aaPredicted RBP27.97■■■□□ 2.07
AC090340.1-201ENST00000620778 TTBK1Q5TCY1 1321 aaPredicted RBP27.88■■■□□ 2.05
AC090340.1-201ENST00000620778 CCER1Q8TC90 406 aaPredicted RBP27.72■■■□□ 2.03
AC090340.1-201ENST00000620778 TRIM41Q8WV44 630 aa27.64■■■□□ 2.02
AC090340.1-201ENST00000620778 ERICH6Q7L0X2 663 aa27.49■■□□□ 1.99
AC090340.1-201ENST00000620778 MYT1Q01538 1121 aa27.39■■□□□ 1.98
AC090340.1-201ENST00000620778 RANGAP1P46060 587 aaPredicted RBP27.34■■□□□ 1.97
AC090340.1-201ENST00000620778 HRCP23327 699 aa27.27■■□□□ 1.96
AC090340.1-201ENST00000620778 YTHDC1Q96MU7 727 aaKnown RBP27.23■■□□□ 1.95
AC090340.1-201ENST00000620778 UBTFP17480 764 aaKnown RBP27.22■■□□□ 1.95
AC090340.1-201ENST00000620778 TRIM26Q12899 539 aaPredicted RBP27.2■■□□□ 1.94
AC090340.1-201ENST00000620778 NEFLP07196 543 aa27.14■■□□□ 1.94
AC090340.1-201ENST00000620778 PPARGC1BQ86YN6 1023 aaKnown RBP27.02■■□□□ 1.92
AC090340.1-201ENST00000620778 ATP1B4Q9UN42 357 aaPredicted RBP27■■□□□ 1.91
AC090340.1-201ENST00000620778 CHIC1Q5VXU3 224 aa26.81■■□□□ 1.88
AC090340.1-201ENST00000620778 LOC105371045A0A1W2PR82 267 aa26.77■■□□□ 1.88
AC090340.1-201ENST00000620778 HNRNPUL2Q1KMD3 747 aaKnown RBP26.42■■□□□ 1.82
AC090340.1-201ENST00000620778 ITGAEP38570 1179 aa26.4■■□□□ 1.82
AC090340.1-201ENST00000620778 DIEXFQ68CQ4 756 aaKnown RBP26.35■■□□□ 1.81
AC090340.1-201ENST00000620778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.32■■□□□ 1.8
AC090340.1-201ENST00000620778 DAXXQ9UER7 740 aaPredicted RBP26.22■■□□□ 1.79
AC090340.1-201ENST00000620778 POLR3GLQ9BT43 218 aa26.14■■□□□ 1.77
AC090340.1-201ENST00000620778 GTF3C3Q9Y5Q9 886 aa26■■□□□ 1.75
AC090340.1-201ENST00000620778 CNGB1Q14028 1251 aaPredicted RBP25.95■■□□□ 1.74
AC090340.1-201ENST00000620778 RTL5Q5HYW3 569 aaPredicted RBP25.87■■□□□ 1.73
AC090340.1-201ENST00000620778 BCANQ96GW7 911 aa25.71■■□□□ 1.71
AC090340.1-201ENST00000620778 ZNF316A6NFI3 1004 aaPredicted RBP25.69■■□□□ 1.7
AC090340.1-201ENST00000620778 ACIN1Q9UKV3 1341 aaKnown RBP25.69■■□□□ 1.7
AC090340.1-201ENST00000620778 FAM50AQ14320 339 aaKnown RBP25.68■■□□□ 1.7
AC090340.1-201ENST00000620778 MYT1LQ9UL68 1186 aa25.67■■□□□ 1.7
AC090340.1-201ENST00000620778 NEUROD1Q13562 356 aa25.61■■□□□ 1.69
AC090340.1-201ENST00000620778 CLSPNQ9HAW4 1339 aa25.6■■□□□ 1.69
AC090340.1-201ENST00000620778 ANP32CO43423 234 aa25.56■■□□□ 1.68
AC090340.1-201ENST00000620778 CDK11AQ9UQ88 783 aaPredicted RBP25.52■■□□□ 1.68
AC090340.1-201ENST00000620778 TRIM52Q96A61 297 aa25.5■■□□□ 1.67
AC090340.1-201ENST00000620778 SLC4A1APQ9BWU0 796 aaKnown RBP25.4■■□□□ 1.66
AC090340.1-201ENST00000620778 CSRNP3Q8WYN3 585 aa25.24■■□□□ 1.63
AC090340.1-201ENST00000620778 ZNF326Q5BKZ1 582 aaKnown RBP25.22■■□□□ 1.63
AC090340.1-201ENST00000620778 DCAF1Q9Y4B6 1507 aa25.18■■□□□ 1.62
AC090340.1-201ENST00000620778 PABPN1Q86U42 306 aaKnown RBP eCLIP25.15■■□□□ 1.62
AC090340.1-201ENST00000620778 ANP32AP39687 249 aaKnown RBP25.08■■□□□ 1.61
AC090340.1-201ENST00000620778 FKBP8Q14318 412 aa25.06■■□□□ 1.6
AC090340.1-201ENST00000620778 ABCC9O60706 1549 aa25.05■■□□□ 1.6
AC090340.1-201ENST00000620778 SCAF1Q9H7N4 1312 aaKnown RBP24.95■■□□□ 1.58
AC090340.1-201ENST00000620778 P3H3Q8IVL6 736 aa24.93■■□□□ 1.58
AC090340.1-201ENST00000620778 ZBTB47Q9UFB7 747 aaPredicted RBP24.92■■□□□ 1.58
AC090340.1-201ENST00000620778 CANXP27824 592 aaKnown RBP24.92■■□□□ 1.58
AC090340.1-201ENST00000620778 NPM2Q86SE8 214 aaKnown RBP24.88■■□□□ 1.57
AC090340.1-201ENST00000620778 DDX10Q13206 875 aaKnown RBP24.86■■□□□ 1.57
AC090340.1-201ENST00000620778 HNRNPUQ00839 825 aaKnown RBP eCLIP24.86■■□□□ 1.57
AC090340.1-201ENST00000620778 TONSLQ96HA7 1378 aa24.81■■□□□ 1.56
AC090340.1-201ENST00000620778 MIER1Q8N108 512 aa24.74■■□□□ 1.55
AC090340.1-201ENST00000620778 ARID3CA6NKF2 412 aa24.71■■□□□ 1.55
AC090340.1-201ENST00000620778 FAM9BQ8IZU0 186 aa24.71■■□□□ 1.55
AC090340.1-201ENST00000620778 BCL11AQ9H165 835 aa24.69■■□□□ 1.54
AC090340.1-201ENST00000620778 EIF5BO60841 1220 aaKnown RBP24.67■■□□□ 1.54
AC090340.1-201ENST00000620778 FBLN2P98095 1184 aa24.66■■□□□ 1.54
AC090340.1-201ENST00000620778 NEFMP07197 916 aa24.66■■□□□ 1.54
AC090340.1-201ENST00000620778 ZNF777Q9ULD5 760 aaPredicted RBP24.62■■□□□ 1.53
AC090340.1-201ENST00000620778 CCDC136Q96JN2 1154 aa24.6■■□□□ 1.53
AC090340.1-201ENST00000620778 ZCCHC6Q5VYS8 1495 aaKnown RBP24.59■■□□□ 1.53
AC090340.1-201ENST00000620778 NBR1Q14596 966 aa24.53■■□□□ 1.52
AC090340.1-201ENST00000620778 UPF2Q9HAU5 1272 aaKnown RBP24.51■■□□□ 1.51
AC090340.1-201ENST00000620778 TMC1Q8TDI8 760 aa24.5■■□□□ 1.51
AC090340.1-201ENST00000620778 MYO15BQ96JP2 1530 aa24.5■■□□□ 1.51
AC090340.1-201ENST00000620778 ANP32BQ92688 251 aaKnown RBP24.49■■□□□ 1.51
AC090340.1-201ENST00000620778 SALL2Q9Y467 1007 aaPredicted RBP24.49■■□□□ 1.51
AC090340.1-201ENST00000620778 MRS2Q9HD23 443 aa24.49■■□□□ 1.51
AC090340.1-201ENST00000620778 SLC24A1O60721 1099 aa24.46■■□□□ 1.51
AC090340.1-201ENST00000620778 HSP90AA1P07900 732 aaKnown RBP24.45■■□□□ 1.5
AC090340.1-201ENST00000620778 SCRIBQ14160 1630 aa24.42■■□□□ 1.5
AC090340.1-201ENST00000620778 IRX6P78412 446 aaPredicted RBP24.42■■□□□ 1.5
AC090340.1-201ENST00000620778 CHIC2Q9UKJ5 165 aa24.39■■□□□ 1.49
AC090340.1-201ENST00000620778 HIRIP3Q9BW71 556 aaPredicted RBP24.38■■□□□ 1.49
AC090340.1-201ENST00000620778 CLIP1P30622 1438 aa24.36■■□□□ 1.49
AC090340.1-201ENST00000620778 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.35■■□□□ 1.49
AC090340.1-201ENST00000620778 GLIPR1L2Q4G1C9 344 aa24.3■■□□□ 1.48
AC090340.1-201ENST00000620778 ANP32EQ9BTT0 268 aa24.28■■□□□ 1.48
AC090340.1-201ENST00000620778 EIF4G2P78344 907 aaKnown RBP eCLIP24.28■■□□□ 1.48
AC090340.1-201ENST00000620778 WDR43Q15061 677 aaKnown RBP eCLIP24.23■■□□□ 1.47
AC090340.1-201ENST00000620778 CEP162Q5TB80 1403 aa24.22■■□□□ 1.47
AC090340.1-201ENST00000620778 MTUS2Q5JR59 1369 aa24.22■■□□□ 1.47
AC090340.1-201ENST00000620778 CCDC180Q9P1Z9 1646 aa24.22■■□□□ 1.47
AC090340.1-201ENST00000620778 CHGAP10645 457 aaKnown RBP24.2■■□□□ 1.46
AC090340.1-201ENST00000620778 ARXQ96QS3 562 aa24.18■■□□□ 1.46
AC090340.1-201ENST00000620778 KDM2AQ9Y2K7 1162 aa24.17■■□□□ 1.46
AC090340.1-201ENST00000620778 EEA1Q15075 1411 aa24.16■■□□□ 1.46
AC090340.1-201ENST00000620778 TSPY4P0CV99 314 aa24.12■■□□□ 1.45
AC090340.1-201ENST00000620778 TSPY10P0CW01 314 aa24.12■■□□□ 1.45
AC090340.1-201ENST00000620778 GOLGA3Q08378 1498 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms