RNA–Protein interactions for RNA: ENST00000457047.6

CD58-203, Transcript of CD58 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD58, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-203ENST00000457047 NISCHQ9Y2I1 1504 aa51.75■■■■■ 5.87
CD58-203ENST00000457047 CCDC180Q9P1Z9 1646 aa46.25■■■■■ 4.99
CD58-203ENST00000457047 ABCC9O60706 1549 aa45.8■■■■■ 4.92
CD58-203ENST00000457047 RB1CC1Q8TDY2 1594 aa43.78■■■■■ 4.6
CD58-203ENST00000457047 NACADO15069 1562 aa43.58■■■■■ 4.57
CD58-203ENST00000457047 DCAF8L2P0C7V8 631 aa43.41■■■■■ 4.54
CD58-203ENST00000457047 MYO15BQ96JP2 1530 aa43.13■■■■■ 4.49
CD58-203ENST00000457047 ZCCHC6Q5VYS8 1495 aaKnown RBP43.01■■■■■ 4.48
CD58-203ENST00000457047 UNC13AQ9UPW8 1703 aa42.88■■■■■ 4.46
CD58-203ENST00000457047 DCAF1Q9Y4B6 1507 aa42.76■■■■■ 4.44
CD58-203ENST00000457047 PABPN1Q86U42 306 aaKnown RBP eCLIP42.7■■■■■ 4.43
CD58-203ENST00000457047 DNAJC5BQ9UF47 199 aa42.56■■■■■ 4.4
CD58-203ENST00000457047 BICRAQ9NZM4 1560 aa42.55■■■■■ 4.4
CD58-203ENST00000457047 SCRIBQ14160 1630 aa42.2■■■■■ 4.35
CD58-203ENST00000457047 SHROOM4Q9ULL8 1493 aa41.94■■■■■ 4.3
CD58-203ENST00000457047 EIF4G1Q04637 1599 aaKnown RBP41.44■■■■■ 4.22
CD58-203ENST00000457047 CC2D2AQ9P2K1 1620 aa41.41■■■■■ 4.22
CD58-203ENST00000457047 CECR2Q9BXF3 1484 aa41.19■■■■■ 4.18
CD58-203ENST00000457047 SMARCA4P51532 1647 aa40.29■■■■■ 4.04
CD58-203ENST00000457047 NCAPD3P42695 1498 aa40.23■■■■■ 4.03
CD58-203ENST00000457047 ATAD2BQ9ULI0 1458 aa40.2■■■■■ 4.03
CD58-203ENST00000457047 BAZ1AQ9NRL2 1556 aaPredicted RBP40.13■■■■■ 4.01
CD58-203ENST00000457047 SMARCA2P51531 1590 aa40.08■■■■■ 4.01
CD58-203ENST00000457047 HMGXB3Q12766 1538 aa39.99■■■■□ 3.99
CD58-203ENST00000457047 MROH2BQ7Z745 1585 aa39.91■■■■□ 3.98
CD58-203ENST00000457047 PEG3Q9GZU2 1588 aa39.88■■■■□ 3.98
CD58-203ENST00000457047 BAZ1BQ9UIG0 1483 aaKnown RBP39.82■■■■□ 3.96
CD58-203ENST00000457047 NESP48681 1621 aa39.5■■■■□ 3.91
CD58-203ENST00000457047 WIZO95785 1651 aa39.47■■■■□ 3.91
CD58-203ENST00000457047 ERCC6Q03468 1493 aa39.46■■■■□ 3.91
CD58-203ENST00000457047 LAMC3Q9Y6N6 1575 aa39.26■■■■□ 3.88
CD58-203ENST00000457047 CUX2O14529 1486 aa39.25■■■■□ 3.87
CD58-203ENST00000457047 RSF1Q96T23 1441 aaPredicted RBP39.23■■■■□ 3.87
CD58-203ENST00000457047 THOC2Q8NI27 1593 aaKnown RBP39.03■■■■□ 3.84
CD58-203ENST00000457047 KIF21AQ7Z4S6 1674 aa39.03■■■■□ 3.84
CD58-203ENST00000457047 CADPSQ9ULU8 1353 aa39.02■■■■□ 3.84
CD58-203ENST00000457047 TOP2AP11388 1531 aaKnown RBP38.97■■■■□ 3.83
CD58-203ENST00000457047 PDS5BQ9NTI5 1447 aa38.97■■■■□ 3.83
CD58-203ENST00000457047 CFTRP13569 1480 aa38.69■■■■□ 3.78
CD58-203ENST00000457047 DNAJC5Q9H3Z4 198 aa38.68■■■■□ 3.78
CD58-203ENST00000457047 MRC2Q9UBG0 1479 aa38.66■■■■□ 3.78
CD58-203ENST00000457047 FANCD2Q9BXW9 1451 aa38.59■■■■□ 3.77
CD58-203ENST00000457047 CEP164Q9UPV0 1460 aa38.59■■■■□ 3.77
CD58-203ENST00000457047 WDR62O43379 1518 aa38.57■■■■□ 3.76
CD58-203ENST00000457047 CCDC88BA6NC98 1476 aa38.52■■■■□ 3.76
CD58-203ENST00000457047 PRDM2Q13029 1718 aa38.39■■■■□ 3.74
CD58-203ENST00000457047 URB2Q14146 1524 aaKnown RBP38.29■■■■□ 3.72
CD58-203ENST00000457047 TOPBP1Q92547 1522 aa37.93■■■■□ 3.66
CD58-203ENST00000457047 DNMBPQ6XZF7 1577 aa37.83■■■■□ 3.65
CD58-203ENST00000457047 ABCC8Q09428 1581 aa37.82■■■■□ 3.64
CD58-203ENST00000457047 IFT140Q96RY7 1462 aa37.8■■■■□ 3.64
CD58-203ENST00000457047 SUPT5HO00267 1087 aaKnown RBP37.78■■■■□ 3.64
CD58-203ENST00000457047 ZNF608Q9ULD9 1512 aaPredicted RBP37.74■■■■□ 3.63
CD58-203ENST00000457047 TARBP1Q13395 1621 aaKnown RBP37.58■■■■□ 3.61
CD58-203ENST00000457047 POLA1P09884 1462 aaPredicted RBP37.57■■■■□ 3.61
CD58-203ENST00000457047 EIF4G3O43432 1585 aaKnown RBP37.56■■■■□ 3.6
CD58-203ENST00000457047 OSCARQ8IYS5 282 aa37.48■■■■□ 3.59
CD58-203ENST00000457047 CUX1P39880 1505 aa37.47■■■■□ 3.59
CD58-203ENST00000457047 RAD54L2Q9Y4B4 1467 aa37.44■■■■□ 3.58
CD58-203ENST00000457047 AQRO60306 1485 aaKnown RBP eCLIP37.43■■■■□ 3.581e-7■■■□□ 14.7
CD58-203ENST00000457047 FGD5Q6ZNL6 1462 aa37.41■■■■□ 3.58
CD58-203ENST00000457047 SOGA1O94964 1423 aa37.37■■■■□ 3.57
CD58-203ENST00000457047 TDRD9Q8NDG6 1382 aaKnown RBP37.25■■■■□ 3.55
CD58-203ENST00000457047 CHD1O14646 1710 aa37.2■■■■□ 3.55
CD58-203ENST00000457047 TRIM41Q8WV44 630 aa37.19■■■■□ 3.54
CD58-203ENST00000457047 WDR97A6NE52 1622 aa37.18■■■■□ 3.54
CD58-203ENST00000457047 SNAPC4Q5SXM2 1469 aa37.07■■■■□ 3.53
CD58-203ENST00000457047 RIMBP3CA6NJZ7 1639 aa37.05■■■■□ 3.52
CD58-203ENST00000457047 RIMBP3BA6NNM3 1639 aa37.05■■■■□ 3.52
CD58-203ENST00000457047 RIMBP3Q9UFD9 1639 aa37.05■■■■□ 3.52
CD58-203ENST00000457047 FBLN2P98095 1184 aa37.03■■■■□ 3.52
CD58-203ENST00000457047 GRIN2BQ13224 1484 aa37.01■■■■□ 3.51
CD58-203ENST00000457047 ABCA10Q8WWZ4 1543 aa37■■■■□ 3.51
CD58-203ENST00000457047 BIVM-ERCC5R4GMW8 1640 aa37■■■■□ 3.51
CD58-203ENST00000457047 SYNJ1O43426 1573 aa36.99■■■■□ 3.51
CD58-203ENST00000457047 TOP2BQ02880 1626 aa36.98■■■■□ 3.51
CD58-203ENST00000457047 WRNQ14191 1432 aaPredicted RBP eCLIP36.97■■■■□ 3.51
CD58-203ENST00000457047 ARHGEF11O15085 1522 aa36.97■■■■□ 3.51
CD58-203ENST00000457047 PBRM1Q86U86 1689 aa36.96■■■■□ 3.51
CD58-203ENST00000457047 MAGI1Q96QZ7 1491 aaPredicted RBP36.96■■■■□ 3.51
CD58-203ENST00000457047 ABCA5Q8WWZ7 1642 aa36.94■■■■□ 3.5
CD58-203ENST00000457047 GAPVD1Q14C86 1478 aa36.94■■■■□ 3.5
CD58-203ENST00000457047 SYNJ2O15056 1496 aa36.83■■■■□ 3.49
CD58-203ENST00000457047 CHMP7Q8WUX9 453 aaPredicted RBP36.82■■■■□ 3.48
CD58-203ENST00000457047 CLASP1Q7Z460 1538 aa36.78■■■■□ 3.48
CD58-203ENST00000457047 ARAP1Q96P48 1450 aa36.65■■■■□ 3.46
CD58-203ENST00000457047 ADAMTS12P58397 1594 aa36.64■■■■□ 3.46
CD58-203ENST00000457047 CYB5RLQ6IPT4 315 aa36.59■■■■□ 3.45
CD58-203ENST00000457047 GRIN2AQ12879 1464 aa36.55■■■■□ 3.44
CD58-203ENST00000457047 ERICH3Q5RHP9 1530 aa36.53■■■■□ 3.44
CD58-203ENST00000457047 FHAD1B1AJZ9 1412 aa36.48■■■■□ 3.43
CD58-203ENST00000457047 CEP170Q5SW79 1584 aa36.43■■■■□ 3.42
CD58-203ENST00000457047 NUP160Q12769 1436 aa36.42■■■■□ 3.42
CD58-203ENST00000457047 ERCC6L2Q5T890 1561 aa36.27■■■■□ 3.4
CD58-203ENST00000457047 SHROOM2Q13796 1616 aa36.23■■■■□ 3.39
CD58-203ENST00000457047 KIF27Q86VH2 1401 aa36.21■■■■□ 3.39
CD58-203ENST00000457047 IGF1RP08069 1367 aa36.16■■■■□ 3.38
CD58-203ENST00000457047 RUSC2Q8N2Y8 1516 aa36.11■■■■□ 3.37
CD58-203ENST00000457047 CUL7Q14999 1698 aa36.1■■■■□ 3.37
CD58-203ENST00000457047 TRHP20396 242 aaPredicted RBP36.02■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms