RNA–Protein interactions for RNA: ENST00000436658.1

CROCCP5-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 5, humanhuman

BASIC

Gene CROCCP5, Length 830 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP5-201ENST00000436658 NISCHQ9Y2I1 1504 aa52.19■■■■■ 5.94
CROCCP5-201ENST00000436658 CCDC180Q9P1Z9 1646 aa46.7■■■■■ 5.07
CROCCP5-201ENST00000436658 ABCC9O60706 1549 aa46.51■■■■■ 5.04
CROCCP5-201ENST00000436658 RB1CC1Q8TDY2 1594 aa44.33■■■■■ 4.69
CROCCP5-201ENST00000436658 NACADO15069 1562 aa44.09■■■■■ 4.65
CROCCP5-201ENST00000436658 DCAF8L2P0C7V8 631 aa43.86■■■■■ 4.61
CROCCP5-201ENST00000436658 MYO15BQ96JP2 1530 aa43.58■■■■■ 4.57
CROCCP5-201ENST00000436658 DNAJC5BQ9UF47 199 aa43.5■■■■■ 4.55
CROCCP5-201ENST00000436658 UNC13AQ9UPW8 1703 aa43.39■■■■■ 4.54
CROCCP5-201ENST00000436658 PABPN1Q86U42 306 aaKnown RBP eCLIP43.33■■■■■ 4.53
CROCCP5-201ENST00000436658 ZCCHC6Q5VYS8 1495 aaKnown RBP43.32■■■■■ 4.52
CROCCP5-201ENST00000436658 BICRAQ9NZM4 1560 aa43.12■■■■■ 4.49
CROCCP5-201ENST00000436658 DCAF1Q9Y4B6 1507 aa43.11■■■■■ 4.49
CROCCP5-201ENST00000436658 SCRIBQ14160 1630 aa42.59■■■■■ 4.41
CROCCP5-201ENST00000436658 SHROOM4Q9ULL8 1493 aa42.48■■■■■ 4.39
CROCCP5-201ENST00000436658 CC2D2AQ9P2K1 1620 aa42.03■■■■■ 4.32
CROCCP5-201ENST00000436658 EIF4G1Q04637 1599 aaKnown RBP42.01■■■■■ 4.32
CROCCP5-201ENST00000436658 CECR2Q9BXF3 1484 aa41.86■■■■■ 4.29
CROCCP5-201ENST00000436658 NCAPD3P42695 1498 aa40.73■■■■■ 4.11
CROCCP5-201ENST00000436658 SMARCA4P51532 1647 aa40.66■■■■■ 4.1
CROCCP5-201ENST00000436658 ATAD2BQ9ULI0 1458 aa40.65■■■■■ 4.1
CROCCP5-201ENST00000436658 SMARCA2P51531 1590 aa40.5■■■■■ 4.07
CROCCP5-201ENST00000436658 BAZ1AQ9NRL2 1556 aaPredicted RBP40.46■■■■■ 4.07
CROCCP5-201ENST00000436658 HMGXB3Q12766 1538 aa40.44■■■■■ 4.06
CROCCP5-201ENST00000436658 PEG3Q9GZU2 1588 aa40.28■■■■■ 4.04
CROCCP5-201ENST00000436658 MROH2BQ7Z745 1585 aa40.24■■■■■ 4.03
CROCCP5-201ENST00000436658 BAZ1BQ9UIG0 1483 aaKnown RBP40.23■■■■■ 4.03
CROCCP5-201ENST00000436658 ERCC6Q03468 1493 aa40.08■■■■■ 4.01
CROCCP5-201ENST00000436658 NESP48681 1621 aa40.05■■■■■ 4
CROCCP5-201ENST00000436658 CUX2O14529 1486 aa39.96■■■■□ 3.99
CROCCP5-201ENST00000436658 WIZO95785 1651 aa39.76■■■■□ 3.96
CROCCP5-201ENST00000436658 LAMC3Q9Y6N6 1575 aa39.75■■■■□ 3.95
CROCCP5-201ENST00000436658 DNAJC5Q9H3Z4 198 aa39.7■■■■□ 3.95
CROCCP5-201ENST00000436658 THOC2Q8NI27 1593 aaKnown RBP39.6■■■■□ 3.93
CROCCP5-201ENST00000436658 KIF21AQ7Z4S6 1674 aa39.53■■■■□ 3.92
CROCCP5-201ENST00000436658 PDS5BQ9NTI5 1447 aa39.48■■■■□ 3.91
CROCCP5-201ENST00000436658 CADPSQ9ULU8 1353 aa39.48■■■■□ 3.91
CROCCP5-201ENST00000436658 RSF1Q96T23 1441 aaPredicted RBP39.48■■■■□ 3.91
CROCCP5-201ENST00000436658 TOP2AP11388 1531 aaKnown RBP39.24■■■■□ 3.87
CROCCP5-201ENST00000436658 MRC2Q9UBG0 1479 aa39.17■■■■□ 3.86
CROCCP5-201ENST00000436658 CFTRP13569 1480 aa39.11■■■■□ 3.85
CROCCP5-201ENST00000436658 WDR62O43379 1518 aa39.09■■■■□ 3.85
CROCCP5-201ENST00000436658 FANCD2Q9BXW9 1451 aa39.05■■■■□ 3.84
CROCCP5-201ENST00000436658 CEP164Q9UPV0 1460 aa39.05■■■■□ 3.84
CROCCP5-201ENST00000436658 CCDC88BA6NC98 1476 aa38.81■■■■□ 3.8
CROCCP5-201ENST00000436658 URB2Q14146 1524 aaKnown RBP38.74■■■■□ 3.79
CROCCP5-201ENST00000436658 PRDM2Q13029 1718 aa38.7■■■■□ 3.79
CROCCP5-201ENST00000436658 TOPBP1Q92547 1522 aa38.34■■■■□ 3.73
CROCCP5-201ENST00000436658 IFT140Q96RY7 1462 aa38.26■■■■□ 3.72
CROCCP5-201ENST00000436658 ZNF608Q9ULD9 1512 aaPredicted RBP38.23■■■■□ 3.71
CROCCP5-201ENST00000436658 ABCC8Q09428 1581 aa38.21■■■■□ 3.71
CROCCP5-201ENST00000436658 DNMBPQ6XZF7 1577 aa38.21■■■■□ 3.71
CROCCP5-201ENST00000436658 OSCARQ8IYS5 282 aa38.14■■■■□ 3.7
CROCCP5-201ENST00000436658 TRIM41Q8WV44 630 aa38.02■■■■□ 3.68
CROCCP5-201ENST00000436658 EIF4G3O43432 1585 aaKnown RBP38.02■■■■□ 3.68
CROCCP5-201ENST00000436658 TARBP1Q13395 1621 aaKnown RBP38.01■■■■□ 3.68
CROCCP5-201ENST00000436658 POLA1P09884 1462 aaPredicted RBP37.97■■■■□ 3.67
CROCCP5-201ENST00000436658 AQRO60306 1485 aaKnown RBP eCLIP37.9■■■■□ 3.66
CROCCP5-201ENST00000436658 RAD54L2Q9Y4B4 1467 aa37.84■■■■□ 3.65
CROCCP5-201ENST00000436658 SUPT5HO00267 1087 aaKnown RBP37.82■■■■□ 3.64
CROCCP5-201ENST00000436658 CUX1P39880 1505 aa37.78■■■■□ 3.64
CROCCP5-201ENST00000436658 SOGA1O94964 1423 aa37.77■■■■□ 3.64
CROCCP5-201ENST00000436658 FGD5Q6ZNL6 1462 aa37.76■■■■□ 3.63
CROCCP5-201ENST00000436658 RIMBP3CA6NJZ7 1639 aa37.69■■■■□ 3.62
CROCCP5-201ENST00000436658 RIMBP3BA6NNM3 1639 aa37.69■■■■□ 3.62
CROCCP5-201ENST00000436658 RIMBP3Q9UFD9 1639 aa37.69■■■■□ 3.62
CROCCP5-201ENST00000436658 TDRD9Q8NDG6 1382 aaKnown RBP37.68■■■■□ 3.62
CROCCP5-201ENST00000436658 CHD1O14646 1710 aa37.68■■■■□ 3.62
CROCCP5-201ENST00000436658 ARHGEF11O15085 1522 aa37.6■■■■□ 3.61
CROCCP5-201ENST00000436658 WDR97A6NE52 1622 aa37.58■■■■□ 3.61
CROCCP5-201ENST00000436658 FBLN2P98095 1184 aa37.52■■■■□ 3.6
CROCCP5-201ENST00000436658 SNAPC4Q5SXM2 1469 aa37.51■■■■□ 3.59
CROCCP5-201ENST00000436658 GRIN2BQ13224 1484 aa37.41■■■■□ 3.58
CROCCP5-201ENST00000436658 MAGI1Q96QZ7 1491 aaPredicted RBP37.39■■■■□ 3.58
CROCCP5-201ENST00000436658 ABCA10Q8WWZ4 1543 aa37.34■■■■□ 3.57
CROCCP5-201ENST00000436658 GAPVD1Q14C86 1478 aa37.32■■■■□ 3.56
CROCCP5-201ENST00000436658 PBRM1Q86U86 1689 aa37.3■■■■□ 3.56
CROCCP5-201ENST00000436658 ABCA5Q8WWZ7 1642 aa37.28■■■■□ 3.56
CROCCP5-201ENST00000436658 CLASP1Q7Z460 1538 aa37.28■■■■□ 3.56
CROCCP5-201ENST00000436658 CHMP7Q8WUX9 453 aaPredicted RBP37.28■■■■□ 3.56
CROCCP5-201ENST00000436658 SYNJ2O15056 1496 aa37.27■■■■□ 3.56
CROCCP5-201ENST00000436658 CYB5RLQ6IPT4 315 aa37.26■■■■□ 3.56
CROCCP5-201ENST00000436658 ARAP1Q96P48 1450 aa37.26■■■■□ 3.55
CROCCP5-201ENST00000436658 BIVM-ERCC5R4GMW8 1640 aa37.22■■■■□ 3.55
CROCCP5-201ENST00000436658 TOP2BQ02880 1626 aa37.21■■■■□ 3.55
CROCCP5-201ENST00000436658 SYNJ1O43426 1573 aa37.21■■■■□ 3.55
CROCCP5-201ENST00000436658 WRNQ14191 1432 aaPredicted RBP eCLIP37.19■■■■□ 3.54
CROCCP5-201ENST00000436658 ADAMTS12P58397 1594 aa36.98■■■■□ 3.51
CROCCP5-201ENST00000436658 GRIN2AQ12879 1464 aa36.95■■■■□ 3.51
CROCCP5-201ENST00000436658 ERICH3Q5RHP9 1530 aa36.86■■■■□ 3.49
CROCCP5-201ENST00000436658 FHAD1B1AJZ9 1412 aa36.85■■■■□ 3.49
CROCCP5-201ENST00000436658 CEP170Q5SW79 1584 aa36.84■■■■□ 3.49
CROCCP5-201ENST00000436658 NUP160Q12769 1436 aa36.84■■■■□ 3.49
CROCCP5-201ENST00000436658 ERCC6L2Q5T890 1561 aa36.75■■■■□ 3.47
CROCCP5-201ENST00000436658 TRHP20396 242 aaPredicted RBP36.72■■■■□ 3.47
CROCCP5-201ENST00000436658 SHROOM2Q13796 1616 aa36.66■■■■□ 3.46
CROCCP5-201ENST00000436658 RUSC2Q8N2Y8 1516 aa36.46■■■■□ 3.43
CROCCP5-201ENST00000436658 IGF1RP08069 1367 aa36.46■■■■□ 3.43
CROCCP5-201ENST00000436658 KIF27Q86VH2 1401 aa36.45■■■■□ 3.43
CROCCP5-201ENST00000436658 PRG4Q92954 1404 aaPredicted RBP36.43■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms