RNA–Protein interactions for RNA: ENST00000539091.5

RAP1B-220, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-220ENST00000539091 NISCHQ9Y2I1 1504 aa49.43■■■■■ 5.5
RAP1B-220ENST00000539091 CCDC180Q9P1Z9 1646 aa43.81■■■■■ 4.6
RAP1B-220ENST00000539091 ABCC9O60706 1549 aa42.64■■■■■ 4.42
RAP1B-220ENST00000539091 DCAF8L2P0C7V8 631 aa41.5■■■■■ 4.23
RAP1B-220ENST00000539091 ZCCHC6Q5VYS8 1495 aaKnown RBP41.21■■■■■ 4.19
RAP1B-220ENST00000539091 RB1CC1Q8TDY2 1594 aa41.17■■■■■ 4.18
RAP1B-220ENST00000539091 NACADO15069 1562 aa41.16■■■■■ 4.18
RAP1B-220ENST00000539091 MYO15BQ96JP2 1530 aa40.94■■■■■ 4.14
RAP1B-220ENST00000539091 DCAF1Q9Y4B6 1507 aa40.88■■■■■ 4.14
RAP1B-220ENST00000539091 SCRIBQ14160 1630 aa40.05■■■■■ 4
RAP1B-220ENST00000539091 UNC13AQ9UPW8 1703 aa40.05■■■■■ 4
RAP1B-220ENST00000539091 PABPN1Q86U42 306 aaKnown RBP eCLIP39.93■■■■□ 3.98
RAP1B-220ENST00000539091 BICRAQ9NZM4 1560 aa39.72■■■■□ 3.95
RAP1B-220ENST00000539091 SHROOM4Q9ULL8 1493 aa39.47■■■■□ 3.91
RAP1B-220ENST00000539091 EIF4G1Q04637 1599 aaKnown RBP38.74■■■■□ 3.79
RAP1B-220ENST00000539091 DNAJC5BQ9UF47 199 aa38.7■■■■□ 3.79
RAP1B-220ENST00000539091 CC2D2AQ9P2K1 1620 aa38.52■■■■□ 3.76
RAP1B-220ENST00000539091 CECR2Q9BXF3 1484 aa38.43■■■■□ 3.74
RAP1B-220ENST00000539091 BAZ1AQ9NRL2 1556 aaPredicted RBP38.36■■■■□ 3.73
RAP1B-220ENST00000539091 SMARCA4P51532 1647 aa38.29■■■■□ 3.72
RAP1B-220ENST00000539091 MROH2BQ7Z745 1585 aa38.07■■■■□ 3.69
RAP1B-220ENST00000539091 SMARCA2P51531 1590 aa38.06■■■■□ 3.68
RAP1B-220ENST00000539091 ATAD2BQ9ULI0 1458 aa38.01■■■■□ 3.67
RAP1B-220ENST00000539091 NCAPD3P42695 1498 aa37.93■■■■□ 3.66
RAP1B-220ENST00000539091 PEG3Q9GZU2 1588 aa37.85■■■■□ 3.65
RAP1B-220ENST00000539091 BAZ1BQ9UIG0 1483 aaKnown RBP37.82■■■■□ 3.64
RAP1B-220ENST00000539091 HMGXB3Q12766 1538 aa37.78■■■■□ 3.64
RAP1B-220ENST00000539091 RSF1Q96T23 1441 aaPredicted RBP37.78■■■■□ 3.64
RAP1B-220ENST00000539091 WIZO95785 1651 aa37.69■■■■□ 3.62
RAP1B-220ENST00000539091 TOP2AP11388 1531 aaKnown RBP37.36■■■■□ 3.57
RAP1B-220ENST00000539091 SUPT5HO00267 1087 aaKnown RBP37.31■■■■□ 3.56
RAP1B-220ENST00000539091 LAMC3Q9Y6N6 1575 aa36.92■■■■□ 3.5
RAP1B-220ENST00000539091 CADPSQ9ULU8 1353 aa36.91■■■■□ 3.5
RAP1B-220ENST00000539091 CCDC88BA6NC98 1476 aa36.91■■■■□ 3.5
RAP1B-220ENST00000539091 NESP48681 1621 aa36.91■■■■□ 3.5
RAP1B-220ENST00000539091 ERCC6Q03468 1493 aa36.86■■■■□ 3.49
RAP1B-220ENST00000539091 PDS5BQ9NTI5 1447 aa36.76■■■■□ 3.48
RAP1B-220ENST00000539091 CFTRP13569 1480 aa36.69■■■■□ 3.46
RAP1B-220ENST00000539091 FANCD2Q9BXW9 1451 aa36.5■■■■□ 3.43
RAP1B-220ENST00000539091 KIF21AQ7Z4S6 1674 aa36.48■■■■□ 3.43
RAP1B-220ENST00000539091 CEP164Q9UPV0 1460 aa36.45■■■■□ 3.43
RAP1B-220ENST00000539091 PRDM2Q13029 1718 aa36.45■■■■□ 3.43
RAP1B-220ENST00000539091 MRC2Q9UBG0 1479 aa36.3■■■■□ 3.4
RAP1B-220ENST00000539091 THOC2Q8NI27 1593 aaKnown RBP36.24■■■■□ 3.39
RAP1B-220ENST00000539091 CUX2O14529 1486 aa36.23■■■■□ 3.39
RAP1B-220ENST00000539091 WDR62O43379 1518 aa36.08■■■■□ 3.37
RAP1B-220ENST00000539091 ABCC8Q09428 1581 aa36.03■■■■□ 3.36
RAP1B-220ENST00000539091 URB2Q14146 1524 aaKnown RBP36.02■■■■□ 3.36
RAP1B-220ENST00000539091 TOPBP1Q92547 1522 aa35.91■■■■□ 3.34
RAP1B-220ENST00000539091 DNMBPQ6XZF7 1577 aa35.9■■■■□ 3.34
RAP1B-220ENST00000539091 WRNQ14191 1432 aaPredicted RBP eCLIP35.71■■■■□ 3.31
RAP1B-220ENST00000539091 CUX1P39880 1505 aa35.71■■■■□ 3.31
RAP1B-220ENST00000539091 IFT140Q96RY7 1462 aa35.66■■■■□ 3.3
RAP1B-220ENST00000539091 POLA1P09884 1462 aaPredicted RBP35.6■■■■□ 3.29
RAP1B-220ENST00000539091 FGD5Q6ZNL6 1462 aa35.6■■■■□ 3.29
RAP1B-220ENST00000539091 SOGA1O94964 1423 aa35.57■■■■□ 3.29
RAP1B-220ENST00000539091 TOP2BQ02880 1626 aa35.52■■■■□ 3.28
RAP1B-220ENST00000539091 SYNJ1O43426 1573 aa35.48■■■■□ 3.27
RAP1B-220ENST00000539091 BIVM-ERCC5R4GMW8 1640 aa35.48■■■■□ 3.27
RAP1B-220ENST00000539091 RAD54L2Q9Y4B4 1467 aa35.47■■■■□ 3.27
RAP1B-220ENST00000539091 TARBP1Q13395 1621 aaKnown RBP35.41■■■■□ 3.26
RAP1B-220ENST00000539091 ZNF608Q9ULD9 1512 aaPredicted RBP35.37■■■■□ 3.25
RAP1B-220ENST00000539091 TDRD9Q8NDG6 1382 aaKnown RBP35.31■■■■□ 3.24
RAP1B-220ENST00000539091 AQRO60306 1485 aaKnown RBP eCLIP35.28■■■■□ 3.241e-6■■■■□ 26.1
RAP1B-220ENST00000539091 EIF4G3O43432 1585 aaKnown RBP35.27■■■■□ 3.24
RAP1B-220ENST00000539091 ABCA10Q8WWZ4 1543 aa35.26■■■■□ 3.23
RAP1B-220ENST00000539091 TRIM41Q8WV44 630 aa35.25■■■■□ 3.23
RAP1B-220ENST00000539091 WDR97A6NE52 1622 aa35.24■■■■□ 3.23
RAP1B-220ENST00000539091 GAPVD1Q14C86 1478 aa35.15■■■■□ 3.22
RAP1B-220ENST00000539091 GRIN2BQ13224 1484 aa35.09■■■■□ 3.21
RAP1B-220ENST00000539091 ABCA5Q8WWZ7 1642 aa35.03■■■■□ 3.2
RAP1B-220ENST00000539091 FBLN2P98095 1184 aa35.02■■■■□ 3.2
RAP1B-220ENST00000539091 KIF27Q86VH2 1401 aa34.99■■■■□ 3.19
RAP1B-220ENST00000539091 PBRM1Q86U86 1689 aa34.98■■■■□ 3.19
RAP1B-220ENST00000539091 SNAPC4Q5SXM2 1469 aa34.97■■■■□ 3.19
RAP1B-220ENST00000539091 MAGI1Q96QZ7 1491 aaPredicted RBP34.96■■■■□ 3.19
RAP1B-220ENST00000539091 CHMP7Q8WUX9 453 aaPredicted RBP34.93■■■■□ 3.18
RAP1B-220ENST00000539091 OSCARQ8IYS5 282 aa34.91■■■■□ 3.18
RAP1B-220ENST00000539091 CHIC1Q5VXU3 224 aa34.87■■■■□ 3.17
RAP1B-220ENST00000539091 ERICH3Q5RHP9 1530 aa34.86■■■■□ 3.17
RAP1B-220ENST00000539091 SYNJ2O15056 1496 aa34.81■■■■□ 3.16
RAP1B-220ENST00000539091 CHD1O14646 1710 aa34.77■■■■□ 3.16
RAP1B-220ENST00000539091 FHAD1B1AJZ9 1412 aa34.75■■■■□ 3.15
RAP1B-220ENST00000539091 DNAJC5Q9H3Z4 198 aa34.75■■■■□ 3.15
RAP1B-220ENST00000539091 IGF1RP08069 1367 aa34.71■■■■□ 3.15
RAP1B-220ENST00000539091 ADAMTS12P58397 1594 aa34.7■■■■□ 3.15
RAP1B-220ENST00000539091 CUL7Q14999 1698 aa34.63■■■■□ 3.13
RAP1B-220ENST00000539091 GRIN2AQ12879 1464 aa34.6■■■■□ 3.13
RAP1B-220ENST00000539091 RUSC2Q8N2Y8 1516 aa34.6■■■■□ 3.13
RAP1B-220ENST00000539091 CARMIL1Q5VZK9 1371 aa34.59■■■■□ 3.13
RAP1B-220ENST00000539091 EEA1Q15075 1411 aa34.54■■■■□ 3.12
RAP1B-220ENST00000539091 FAM9AQ8IZU1 332 aaPredicted RBP34.49■■■■□ 3.11
RAP1B-220ENST00000539091 CSRNP3Q8WYN3 585 aa34.47■■■■□ 3.11
RAP1B-220ENST00000539091 RAPGEF2Q9Y4G8 1499 aa34.4■■■■□ 3.1
RAP1B-220ENST00000539091 NUP160Q12769 1436 aa34.38■■■■□ 3.09
RAP1B-220ENST00000539091 CEP170Q5SW79 1584 aa34.35■■■■□ 3.09
RAP1B-220ENST00000539091 CLASP1Q7Z460 1538 aa34.35■■■■□ 3.09
RAP1B-220ENST00000539091 PRXQ9BXM0 1461 aa34.26■■■■□ 3.07
RAP1B-220ENST00000539091 KIAA0586Q9BVV6 1533 aa34.21■■■■□ 3.07
RAP1B-220ENST00000539091 ARHGEF11O15085 1522 aa34.19■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms