RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 NISCHQ9Y2I1 1504 aa45.51■■■■■ 4.88
SMG8-203ENST00000578922 CCDC180Q9P1Z9 1646 aa39.54■■■■□ 3.92
SMG8-203ENST00000578922 ZCCHC6Q5VYS8 1495 aaKnown RBP38.22■■■■□ 3.71
SMG8-203ENST00000578922 DCAF8L2P0C7V8 631 aa37.93■■■■□ 3.66
SMG8-203ENST00000578922 ABCC9O60706 1549 aa37.67■■■■□ 3.62
SMG8-203ENST00000578922 DCAF1Q9Y4B6 1507 aa37.47■■■■□ 3.59
SMG8-203ENST00000578922 SHROOM4Q9ULL8 1493 aa37.47■■■■□ 3.59
SMG8-203ENST00000578922 MYO15BQ96JP2 1530 aa36.98■■■■□ 3.51
SMG8-203ENST00000578922 NACADO15069 1562 aa36.87■■■■□ 3.49
SMG8-203ENST00000578922 SCRIBQ14160 1630 aa36.62■■■■□ 3.45
SMG8-203ENST00000578922 RB1CC1Q8TDY2 1594 aa36.59■■■■□ 3.45
SMG8-203ENST00000578922 SUPT5HO00267 1087 aaKnown RBP36.05■■■■□ 3.36
SMG8-203ENST00000578922 UNC13AQ9UPW8 1703 aa35.91■■■■□ 3.34
SMG8-203ENST00000578922 PABPN1Q86U42 306 aaKnown RBP eCLIP35.63■■■■□ 3.29
SMG8-203ENST00000578922 BICRAQ9NZM4 1560 aa35.53■■■■□ 3.28
SMG8-203ENST00000578922 CECR2Q9BXF3 1484 aa35.49■■■■□ 3.27
SMG8-203ENST00000578922 RSF1Q96T23 1441 aaPredicted RBP35.37■■■■□ 3.25
SMG8-203ENST00000578922 MROH2BQ7Z745 1585 aa35.24■■■■□ 3.23
SMG8-203ENST00000578922 BAZ1AQ9NRL2 1556 aaPredicted RBP35.12■■■■□ 3.21
SMG8-203ENST00000578922 SMARCA4P51532 1647 aa34.98■■■■□ 3.19
SMG8-203ENST00000578922 WIZO95785 1651 aa34.97■■■■□ 3.19
SMG8-203ENST00000578922 TOP2AP11388 1531 aaKnown RBP34.5■■■■□ 3.11
SMG8-203ENST00000578922 EIF4G1Q04637 1599 aaKnown RBP34.48■■■■□ 3.11
SMG8-203ENST00000578922 PEG3Q9GZU2 1588 aa34.45■■■■□ 3.11
SMG8-203ENST00000578922 ATAD2BQ9ULI0 1458 aa34.43■■■■□ 3.1
SMG8-203ENST00000578922 CHIC1Q5VXU3 224 aa34.38■■■■□ 3.09
SMG8-203ENST00000578922 SMARCA2P51531 1590 aa34.34■■■■□ 3.09
SMG8-203ENST00000578922 BAZ1BQ9UIG0 1483 aaKnown RBP34.26■■■■□ 3.07
SMG8-203ENST00000578922 CCDC88BA6NC98 1476 aa34.23■■■■□ 3.07
SMG8-203ENST00000578922 NCAPD3P42695 1498 aa34.06■■■■□ 3.04
SMG8-203ENST00000578922 CC2D2AQ9P2K1 1620 aa33.99■■■■□ 3.03
SMG8-203ENST00000578922 HMGXB3Q12766 1538 aa33.98■■■■□ 3.03
SMG8-203ENST00000578922 TRIM41Q8WV44 630 aa33.78■■■■□ 3
SMG8-203ENST00000578922 ABCC8Q09428 1581 aa33.6■■■□□ 2.97
SMG8-203ENST00000578922 DNAJC5BQ9UF47 199 aa33.35■■■□□ 2.93
SMG8-203ENST00000578922 CFTRP13569 1480 aa33.35■■■□□ 2.93
SMG8-203ENST00000578922 FAM9AQ8IZU1 332 aaPredicted RBP33.33■■■□□ 2.93
SMG8-203ENST00000578922 WRNQ14191 1432 aaPredicted RBP eCLIP33.3■■■□□ 2.92
SMG8-203ENST00000578922 CADPSQ9ULU8 1353 aa33.26■■■□□ 2.92
SMG8-203ENST00000578922 LOC105371045A0A1W2PR82 267 aa33.2■■■□□ 2.91
SMG8-203ENST00000578922 SYNJ1O43426 1573 aa33.18■■■□□ 2.9
SMG8-203ENST00000578922 PRDM2Q13029 1718 aa33.09■■■□□ 2.89
SMG8-203ENST00000578922 NESP48681 1621 aa33.08■■■□□ 2.89
SMG8-203ENST00000578922 EHMT2Q96KQ7 1210 aa33■■■□□ 2.87
SMG8-203ENST00000578922 SOGA1O94964 1423 aa32.98■■■□□ 2.87
SMG8-203ENST00000578922 TOP2BQ02880 1626 aa32.96■■■□□ 2.87
SMG8-203ENST00000578922 CUX1P39880 1505 aa32.94■■■□□ 2.86
SMG8-203ENST00000578922 FANCD2Q9BXW9 1451 aa32.93■■■□□ 2.86
SMG8-203ENST00000578922 BIVM-ERCC5R4GMW8 1640 aa32.89■■■□□ 2.86
SMG8-203ENST00000578922 LAMC3Q9Y6N6 1575 aa32.89■■■□□ 2.86
SMG8-203ENST00000578922 RUSC2Q8N2Y8 1516 aa32.88■■■□□ 2.85
SMG8-203ENST00000578922 EEA1Q15075 1411 aa32.71■■■□□ 2.83
SMG8-203ENST00000578922 CSRNP3Q8WYN3 585 aa32.69■■■□□ 2.82
SMG8-203ENST00000578922 PDS5BQ9NTI5 1447 aa32.69■■■□□ 2.82
SMG8-203ENST00000578922 CEP164Q9UPV0 1460 aa32.69■■■□□ 2.82
SMG8-203ENST00000578922 KIF21AQ7Z4S6 1674 aa32.59■■■□□ 2.81
SMG8-203ENST00000578922 FGD5Q6ZNL6 1462 aa32.58■■■□□ 2.81
SMG8-203ENST00000578922 DNMBPQ6XZF7 1577 aa32.56■■■□□ 2.8
SMG8-203ENST00000578922 TOPBP1Q92547 1522 aa32.55■■■□□ 2.8
SMG8-203ENST00000578922 URB2Q14146 1524 aaKnown RBP32.51■■■□□ 2.8
SMG8-203ENST00000578922 KIF27Q86VH2 1401 aa32.43■■■□□ 2.78
SMG8-203ENST00000578922 POLA1P09884 1462 aaPredicted RBP32.41■■■□□ 2.78
SMG8-203ENST00000578922 CUX2O14529 1486 aa32.4■■■□□ 2.78
SMG8-203ENST00000578922 RAD54L2Q9Y4B4 1467 aa32.39■■■□□ 2.78
SMG8-203ENST00000578922 UBTFP17480 764 aaKnown RBP32.38■■■□□ 2.77
SMG8-203ENST00000578922 GOLGA3Q08378 1498 aa32.36■■■□□ 2.77
SMG8-203ENST00000578922 KIF21BO75037 1637 aa32.32■■■□□ 2.76
SMG8-203ENST00000578922 MRC2Q9UBG0 1479 aa32.27■■■□□ 2.76
SMG8-203ENST00000578922 RAPGEF2Q9Y4G8 1499 aa32.27■■■□□ 2.76
SMG8-203ENST00000578922 ERCC6Q03468 1493 aa32.26■■■□□ 2.76
SMG8-203ENST00000578922 TNIKQ9UKE5 1360 aa32.25■■■□□ 2.75
SMG8-203ENST00000578922 ABCA10Q8WWZ4 1543 aa32.21■■■□□ 2.75
SMG8-203ENST00000578922 PRXQ9BXM0 1461 aa32.19■■■□□ 2.74
SMG8-203ENST00000578922 IGF1RP08069 1367 aa32.17■■■□□ 2.74
SMG8-203ENST00000578922 CEP162Q5TB80 1403 aa32.15■■■□□ 2.74
SMG8-203ENST00000578922 TDRD9Q8NDG6 1382 aaKnown RBP32.09■■■□□ 2.73
SMG8-203ENST00000578922 ERICH3Q5RHP9 1530 aa32.08■■■□□ 2.73
SMG8-203ENST00000578922 WDR97A6NE52 1622 aa32.08■■■□□ 2.73
SMG8-203ENST00000578922 WDR62O43379 1518 aa32.07■■■□□ 2.72
SMG8-203ENST00000578922 HRCP23327 699 aa32.04■■■□□ 2.72
SMG8-203ENST00000578922 RANGAP1P46060 587 aaPredicted RBP32.04■■■□□ 2.72
SMG8-203ENST00000578922 TARBP1Q13395 1621 aaKnown RBP32.03■■■□□ 2.72
SMG8-203ENST00000578922 CARMIL1Q5VZK9 1371 aa32.02■■■□□ 2.72
SMG8-203ENST00000578922 THOC2Q8NI27 1593 aaKnown RBP31.99■■■□□ 2.71
SMG8-203ENST00000578922 GAPVD1Q14C86 1478 aa31.95■■■□□ 2.71
SMG8-203ENST00000578922 ABCA5Q8WWZ7 1642 aa31.95■■■□□ 2.7
SMG8-203ENST00000578922 CLIP1P30622 1438 aa31.9■■■□□ 2.7
SMG8-203ENST00000578922 AQRO60306 1485 aaKnown RBP eCLIP31.87■■■□□ 2.69
SMG8-203ENST00000578922 IFT140Q96RY7 1462 aa31.86■■■□□ 2.69
SMG8-203ENST00000578922 ZNF608Q9ULD9 1512 aaPredicted RBP31.82■■■□□ 2.68
SMG8-203ENST00000578922 CUL7Q14999 1698 aa31.82■■■□□ 2.68
SMG8-203ENST00000578922 PCGF6Q9BYE7 350 aa31.81■■■□□ 2.68
SMG8-203ENST00000578922 PPARGC1BQ86YN6 1023 aaKnown RBP31.77■■■□□ 2.68
SMG8-203ENST00000578922 PBRM1Q86U86 1689 aa31.73■■■□□ 2.67
SMG8-203ENST00000578922 GRIN2BQ13224 1484 aa31.67■■■□□ 2.66
SMG8-203ENST00000578922 EIF4G3O43432 1585 aaKnown RBP31.63■■■□□ 2.65
SMG8-203ENST00000578922 VPS8Q8N3P4 1428 aa31.58■■■□□ 2.65
SMG8-203ENST00000578922 ARAP1Q96P48 1450 aa31.57■■■□□ 2.64
SMG8-203ENST00000578922 FHAD1B1AJZ9 1412 aa31.56■■■□□ 2.64
SMG8-203ENST00000578922 ADAMTS12P58397 1594 aa31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms