RNA–Protein interactions for RNA: ENST00000390615.2

IGHV3-33-201, Transcript of immunoglobulin heavy variable 3-33, humanhuman

APPRIS P1 BASIC

Gene IGHV3-33, Length 431 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-33-201ENST00000390615 NISCHQ9Y2I1 1504 aa48.04■■■■■ 5.28
IGHV3-33-201ENST00000390615 CCDC180Q9P1Z9 1646 aa42.34■■■■■ 4.37
IGHV3-33-201ENST00000390615 ABCC9O60706 1549 aa40.74■■■■■ 4.11
IGHV3-33-201ENST00000390615 ZCCHC6Q5VYS8 1495 aaKnown RBP40.17■■■■■ 4.02
IGHV3-33-201ENST00000390615 DCAF8L2P0C7V8 631 aa40.05■■■■■ 4
IGHV3-33-201ENST00000390615 DCAF1Q9Y4B6 1507 aa39.75■■■■□ 3.95
IGHV3-33-201ENST00000390615 NACADO15069 1562 aa39.65■■■■□ 3.94
IGHV3-33-201ENST00000390615 MYO15BQ96JP2 1530 aa39.6■■■■□ 3.93
IGHV3-33-201ENST00000390615 RB1CC1Q8TDY2 1594 aa39.53■■■■□ 3.92
IGHV3-33-201ENST00000390615 SCRIBQ14160 1630 aa38.77■■■■□ 3.8
IGHV3-33-201ENST00000390615 SHROOM4Q9ULL8 1493 aa38.59■■■■□ 3.77
IGHV3-33-201ENST00000390615 UNC13AQ9UPW8 1703 aa38.52■■■■□ 3.76
IGHV3-33-201ENST00000390615 PABPN1Q86U42 306 aaKnown RBP eCLIP38.24■■■■□ 3.71
IGHV3-33-201ENST00000390615 BICRAQ9NZM4 1560 aa38.19■■■■□ 3.7
IGHV3-33-201ENST00000390615 CECR2Q9BXF3 1484 aa37.32■■■■□ 3.56
IGHV3-33-201ENST00000390615 BAZ1AQ9NRL2 1556 aaPredicted RBP37.21■■■■□ 3.55
IGHV3-33-201ENST00000390615 EIF4G1Q04637 1599 aaKnown RBP37.18■■■■□ 3.54
IGHV3-33-201ENST00000390615 SMARCA4P51532 1647 aa37.1■■■■□ 3.53
IGHV3-33-201ENST00000390615 MROH2BQ7Z745 1585 aa37.03■■■■□ 3.52
IGHV3-33-201ENST00000390615 RSF1Q96T23 1441 aaPredicted RBP36.92■■■■□ 3.5
IGHV3-33-201ENST00000390615 CC2D2AQ9P2K1 1620 aa36.84■■■■□ 3.49
IGHV3-33-201ENST00000390615 SUPT5HO00267 1087 aaKnown RBP36.77■■■■□ 3.48
IGHV3-33-201ENST00000390615 SMARCA2P51531 1590 aa36.74■■■■□ 3.47
IGHV3-33-201ENST00000390615 ATAD2BQ9ULI0 1458 aa36.7■■■■□ 3.47
IGHV3-33-201ENST00000390615 WIZO95785 1651 aa36.69■■■■□ 3.46
IGHV3-33-201ENST00000390615 PEG3Q9GZU2 1588 aa36.67■■■■□ 3.46
IGHV3-33-201ENST00000390615 DNAJC5BQ9UF47 199 aa36.56■■■■□ 3.44
IGHV3-33-201ENST00000390615 NCAPD3P42695 1498 aa36.55■■■■□ 3.44
IGHV3-33-201ENST00000390615 BAZ1BQ9UIG0 1483 aaKnown RBP36.52■■■■□ 3.44
IGHV3-33-201ENST00000390615 HMGXB3Q12766 1538 aa36.44■■■■□ 3.42
IGHV3-33-201ENST00000390615 TOP2AP11388 1531 aaKnown RBP36.36■■■■□ 3.41
IGHV3-33-201ENST00000390615 CCDC88BA6NC98 1476 aa35.93■■■■□ 3.34
IGHV3-33-201ENST00000390615 CADPSQ9ULU8 1353 aa35.58■■■■□ 3.29
IGHV3-33-201ENST00000390615 CFTRP13569 1480 aa35.49■■■■□ 3.27
IGHV3-33-201ENST00000390615 LAMC3Q9Y6N6 1575 aa35.49■■■■□ 3.27
IGHV3-33-201ENST00000390615 NESP48681 1621 aa35.44■■■■□ 3.26
IGHV3-33-201ENST00000390615 PDS5BQ9NTI5 1447 aa35.29■■■■□ 3.24
IGHV3-33-201ENST00000390615 PRDM2Q13029 1718 aa35.28■■■■□ 3.24
IGHV3-33-201ENST00000390615 FANCD2Q9BXW9 1451 aa35.18■■■■□ 3.22
IGHV3-33-201ENST00000390615 ERCC6Q03468 1493 aa35.13■■■■□ 3.21
IGHV3-33-201ENST00000390615 CEP164Q9UPV0 1460 aa35.09■■■■□ 3.21
IGHV3-33-201ENST00000390615 KIF21AQ7Z4S6 1674 aa35.04■■■■□ 3.2
IGHV3-33-201ENST00000390615 ABCC8Q09428 1581 aa34.87■■■■□ 3.17
IGHV3-33-201ENST00000390615 WRNQ14191 1432 aaPredicted RBP eCLIP34.85■■■■□ 3.17
IGHV3-33-201ENST00000390615 MRC2Q9UBG0 1479 aa34.84■■■■□ 3.17
IGHV3-33-201ENST00000390615 URB2Q14146 1524 aaKnown RBP34.73■■■■□ 3.15
IGHV3-33-201ENST00000390615 DNMBPQ6XZF7 1577 aa34.72■■■■□ 3.15
IGHV3-33-201ENST00000390615 CUX1P39880 1505 aa34.7■■■■□ 3.14
IGHV3-33-201ENST00000390615 CHIC1Q5VXU3 224 aa34.69■■■■□ 3.14
IGHV3-33-201ENST00000390615 TRIM41Q8WV44 630 aa34.69■■■■□ 3.14
IGHV3-33-201ENST00000390615 THOC2Q8NI27 1593 aaKnown RBP34.69■■■■□ 3.14
IGHV3-33-201ENST00000390615 TOPBP1Q92547 1522 aa34.68■■■■□ 3.14
IGHV3-33-201ENST00000390615 SYNJ1O43426 1573 aa34.65■■■■□ 3.14
IGHV3-33-201ENST00000390615 WDR62O43379 1518 aa34.65■■■■□ 3.14
IGHV3-33-201ENST00000390615 TOP2BQ02880 1626 aa34.63■■■■□ 3.13
IGHV3-33-201ENST00000390615 BIVM-ERCC5R4GMW8 1640 aa34.59■■■■□ 3.13
IGHV3-33-201ENST00000390615 FGD5Q6ZNL6 1462 aa34.5■■■■□ 3.11
IGHV3-33-201ENST00000390615 POLA1P09884 1462 aaPredicted RBP34.44■■■■□ 3.1
IGHV3-33-201ENST00000390615 SOGA1O94964 1423 aa34.38■■■■□ 3.09
IGHV3-33-201ENST00000390615 CUX2O14529 1486 aa34.36■■■■□ 3.09
IGHV3-33-201ENST00000390615 IFT140Q96RY7 1462 aa34.3■■■■□ 3.08
IGHV3-33-201ENST00000390615 RAD54L2Q9Y4B4 1467 aa34.3■■■■□ 3.08
IGHV3-33-201ENST00000390615 TARBP1Q13395 1621 aaKnown RBP34.19■■■■□ 3.06
IGHV3-33-201ENST00000390615 ABCA10Q8WWZ4 1543 aa34.18■■■■□ 3.06
IGHV3-33-201ENST00000390615 KIF27Q86VH2 1401 aa34.09■■■■□ 3.05
IGHV3-33-201ENST00000390615 WDR97A6NE52 1622 aa34.08■■■■□ 3.05
IGHV3-33-201ENST00000390615 TDRD9Q8NDG6 1382 aaKnown RBP34.08■■■■□ 3.05
IGHV3-33-201ENST00000390615 ZNF608Q9ULD9 1512 aaPredicted RBP34.03■■■■□ 3.04
IGHV3-33-201ENST00000390615 AQRO60306 1485 aaKnown RBP eCLIP33.98■■■■□ 3.03
IGHV3-33-201ENST00000390615 EEA1Q15075 1411 aa33.97■■■■□ 3.03
IGHV3-33-201ENST00000390615 GAPVD1Q14C86 1478 aa33.97■■■■□ 3.03
IGHV3-33-201ENST00000390615 FAM9AQ8IZU1 332 aaPredicted RBP33.97■■■■□ 3.03
IGHV3-33-201ENST00000390615 EIF4G3O43432 1585 aaKnown RBP33.94■■■■□ 3.02
IGHV3-33-201ENST00000390615 ABCA5Q8WWZ7 1642 aa33.93■■■■□ 3.02
IGHV3-33-201ENST00000390615 RUSC2Q8N2Y8 1516 aa33.93■■■■□ 3.02
IGHV3-33-201ENST00000390615 GRIN2BQ13224 1484 aa33.86■■■■□ 3.01
IGHV3-33-201ENST00000390615 CSRNP3Q8WYN3 585 aa33.82■■■■□ 3
IGHV3-33-201ENST00000390615 PBRM1Q86U86 1689 aa33.8■■■■□ 3
IGHV3-33-201ENST00000390615 ERICH3Q5RHP9 1530 aa33.79■■■■□ 3
IGHV3-33-201ENST00000390615 IGF1RP08069 1367 aa33.77■■■■□ 3
IGHV3-33-201ENST00000390615 SNAPC4Q5SXM2 1469 aa33.69■■■□□ 2.98
IGHV3-33-201ENST00000390615 MAGI1Q96QZ7 1491 aaPredicted RBP33.67■■■□□ 2.98
IGHV3-33-201ENST00000390615 CUL7Q14999 1698 aa33.66■■■□□ 2.98
IGHV3-33-201ENST00000390615 CARMIL1Q5VZK9 1371 aa33.65■■■□□ 2.98
IGHV3-33-201ENST00000390615 FHAD1B1AJZ9 1412 aa33.62■■■□□ 2.97
IGHV3-33-201ENST00000390615 ADAMTS12P58397 1594 aa33.58■■■□□ 2.97
IGHV3-33-201ENST00000390615 FBLN2P98095 1184 aa33.56■■■□□ 2.96
IGHV3-33-201ENST00000390615 CHMP7Q8WUX9 453 aaPredicted RBP33.56■■■□□ 2.96
IGHV3-33-201ENST00000390615 PRXQ9BXM0 1461 aa33.54■■■□□ 2.96
IGHV3-33-201ENST00000390615 SYNJ2O15056 1496 aa33.53■■■□□ 2.96
IGHV3-33-201ENST00000390615 RAPGEF2Q9Y4G8 1499 aa33.53■■■□□ 2.96
IGHV3-33-201ENST00000390615 EHMT2Q96KQ7 1210 aa33.51■■■□□ 2.95
IGHV3-33-201ENST00000390615 KIF21BO75037 1637 aa33.5■■■□□ 2.95
IGHV3-33-201ENST00000390615 GOLGA3Q08378 1498 aa33.43■■■□□ 2.94
IGHV3-33-201ENST00000390615 GRIN2AQ12879 1464 aa33.4■■■□□ 2.94
IGHV3-33-201ENST00000390615 UBTFP17480 764 aaKnown RBP33.38■■■□□ 2.93
IGHV3-33-201ENST00000390615 CHD1O14646 1710 aa33.35■■■□□ 2.93
IGHV3-33-201ENST00000390615 LOC105371045A0A1W2PR82 267 aa33.3■■■□□ 2.92
IGHV3-33-201ENST00000390615 NUP160Q12769 1436 aa33.18■■■□□ 2.9
IGHV3-33-201ENST00000390615 OSCARQ8IYS5 282 aa33.17■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms