RNA–Protein interactions for RNA: ENST00000421688.5

TMEM235-202, Transcript of transmembrane protein 235, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMEM235, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235-202ENST00000421688 NISCHQ9Y2I1 1504 aa37.94■■■■□ 3.66
TMEM235-202ENST00000421688 SHROOM4Q9ULL8 1493 aa33.1■■■□□ 2.89
TMEM235-202ENST00000421688 SUPT5HO00267 1087 aaKnown RBP32.83■■■□□ 2.85
TMEM235-202ENST00000421688 HRCP23327 699 aa32.7■■■□□ 2.82
TMEM235-202ENST00000421688 MYO15BQ96JP2 1530 aa32.41■■■□□ 2.78
TMEM235-202ENST00000421688 CHIC1Q5VXU3 224 aa32.26■■■□□ 2.76
TMEM235-202ENST00000421688 ZCCHC6Q5VYS8 1495 aaKnown RBP32.26■■■□□ 2.75
TMEM235-202ENST00000421688 PCGF6Q9BYE7 350 aa32.16■■■□□ 2.74
TMEM235-202ENST00000421688 PPARGC1BQ86YN6 1023 aaKnown RBP31.94■■■□□ 2.7
TMEM235-202ENST00000421688 CCDC180Q9P1Z9 1646 aa31.83■■■□□ 2.69
TMEM235-202ENST00000421688 DCAF1Q9Y4B6 1507 aa31.71■■■□□ 2.67
TMEM235-202ENST00000421688 LOC105371045A0A1W2PR82 267 aa31.4■■■□□ 2.62
TMEM235-202ENST00000421688 DCAF8L2P0C7V8 631 aa31.38■■■□□ 2.61
TMEM235-202ENST00000421688 TRIM26Q12899 539 aaPredicted RBP31.3■■■□□ 2.6
TMEM235-202ENST00000421688 PELP1Q8IZL8 1130 aaKnown RBP31.01■■■□□ 2.55
TMEM235-202ENST00000421688 ZEB1P37275 1124 aaPredicted RBP30.96■■■□□ 2.55
TMEM235-202ENST00000421688 SCAF1Q9H7N4 1312 aaKnown RBP30.68■■■□□ 2.5
TMEM235-202ENST00000421688 ABCC9O60706 1549 aa30.61■■■□□ 2.49
TMEM235-202ENST00000421688 TRIM41Q8WV44 630 aa30.47■■■□□ 2.47
TMEM235-202ENST00000421688 RSF1Q96T23 1441 aaPredicted RBP30.38■■■□□ 2.45
TMEM235-202ENST00000421688 FAM9AQ8IZU1 332 aaPredicted RBP30.33■■■□□ 2.45
TMEM235-202ENST00000421688 RB1CC1Q8TDY2 1594 aa30.23■■■□□ 2.43
TMEM235-202ENST00000421688 EHMT2Q96KQ7 1210 aa30.11■■■□□ 2.41
TMEM235-202ENST00000421688 SCRIBQ14160 1630 aa30.09■■■□□ 2.41
TMEM235-202ENST00000421688 ACIN1Q9UKV3 1341 aaKnown RBP30.08■■■□□ 2.41
TMEM235-202ENST00000421688 NEUROD1Q13562 356 aa29.99■■■□□ 2.39
TMEM235-202ENST00000421688 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.94■■■□□ 2.38
TMEM235-202ENST00000421688 CCER1Q8TC90 406 aaPredicted RBP29.9■■■□□ 2.38
TMEM235-202ENST00000421688 GTF3C3Q9Y5Q9 886 aa29.79■■■□□ 2.36
TMEM235-202ENST00000421688 CENPBP07199 599 aaPredicted RBP29.77■■■□□ 2.36
TMEM235-202ENST00000421688 DIEXFQ68CQ4 756 aaKnown RBP29.77■■■□□ 2.36
TMEM235-202ENST00000421688 MYT1Q01538 1121 aa29.69■■■□□ 2.34
TMEM235-202ENST00000421688 CECR2Q9BXF3 1484 aa29.61■■■□□ 2.33
TMEM235-202ENST00000421688 NACADO15069 1562 aa29.59■■■□□ 2.33
TMEM235-202ENST00000421688 MROH2BQ7Z745 1585 aa29.59■■■□□ 2.33
TMEM235-202ENST00000421688 WIZO95785 1651 aa29.5■■■□□ 2.31
TMEM235-202ENST00000421688 WRNQ14191 1432 aaPredicted RBP eCLIP29.43■■■□□ 2.3
TMEM235-202ENST00000421688 EIF4G1Q04637 1599 aaKnown RBP29.41■■■□□ 2.3
TMEM235-202ENST00000421688 TTBK1Q5TCY1 1321 aaPredicted RBP29.36■■■□□ 2.29
TMEM235-202ENST00000421688 BAZ1AQ9NRL2 1556 aaPredicted RBP29.33■■■□□ 2.29
TMEM235-202ENST00000421688 ZNF316A6NFI3 1004 aaPredicted RBP29.31■■■□□ 2.28
TMEM235-202ENST00000421688 CEP162Q5TB80 1403 aa29.28■■■□□ 2.28
TMEM235-202ENST00000421688 YTHDC1Q96MU7 727 aaKnown RBP29.17■■■□□ 2.26
TMEM235-202ENST00000421688 CCDC88BA6NC98 1476 aa29.17■■■□□ 2.26
TMEM235-202ENST00000421688 ABCC8Q09428 1581 aa29.16■■■□□ 2.26
TMEM235-202ENST00000421688 TNIKQ9UKE5 1360 aa29.13■■■□□ 2.25
TMEM235-202ENST00000421688 SOGA1O94964 1423 aa29.03■■■□□ 2.24
TMEM235-202ENST00000421688 MIER1Q8N108 512 aa29.03■■■□□ 2.24
TMEM235-202ENST00000421688 TOP2AP11388 1531 aaKnown RBP28.97■■■□□ 2.23
TMEM235-202ENST00000421688 EEA1Q15075 1411 aa28.93■■■□□ 2.22
TMEM235-202ENST00000421688 UBTFP17480 764 aaKnown RBP28.93■■■□□ 2.22
TMEM235-202ENST00000421688 CSRNP3Q8WYN3 585 aa28.92■■■□□ 2.22
TMEM235-202ENST00000421688 SMARCA2P51531 1590 aa28.87■■■□□ 2.21
TMEM235-202ENST00000421688 RUSC2Q8N2Y8 1516 aa28.86■■■□□ 2.21
TMEM235-202ENST00000421688 GOLGA3Q08378 1498 aa28.83■■■□□ 2.21
TMEM235-202ENST00000421688 HNRNPUL2Q1KMD3 747 aaKnown RBP28.81■■■□□ 2.2
TMEM235-202ENST00000421688 UNC13AQ9UPW8 1703 aa28.79■■■□□ 2.2
TMEM235-202ENST00000421688 SMARCA4P51532 1647 aa28.75■■■□□ 2.19
TMEM235-202ENST00000421688 PABPN1Q86U42 306 aaKnown RBP eCLIP28.69■■■□□ 2.18
TMEM235-202ENST00000421688 CEP164Q9UPV0 1460 aa28.57■■■□□ 2.16
TMEM235-202ENST00000421688 CLIP1P30622 1438 aa28.55■■■□□ 2.16
TMEM235-202ENST00000421688 KIF21BO75037 1637 aa28.54■■■□□ 2.16
TMEM235-202ENST00000421688 CLSPNQ9HAW4 1339 aa28.53■■■□□ 2.16
TMEM235-202ENST00000421688 VPS8Q8N3P4 1428 aa28.52■■■□□ 2.16
TMEM235-202ENST00000421688 SUPT16HQ9Y5B9 1047 aaKnown RBP28.47■■■□□ 2.15
TMEM235-202ENST00000421688 BICRAQ9NZM4 1560 aa28.45■■■□□ 2.15
TMEM235-202ENST00000421688 APLP2Q06481 763 aa28.45■■■□□ 2.14
TMEM235-202ENST00000421688 SYNJ1O43426 1573 aa28.37■■■□□ 2.13
TMEM235-202ENST00000421688 BAZ1BQ9UIG0 1483 aaKnown RBP28.36■■■□□ 2.13
TMEM235-202ENST00000421688 DHX57Q6P158 1386 aaKnown RBP28.32■■■□□ 2.12
TMEM235-202ENST00000421688 RAPGEF2Q9Y4G8 1499 aa28.28■■■□□ 2.12
TMEM235-202ENST00000421688 TSHZ2Q9NRE2 1034 aa28.24■■■□□ 2.11
TMEM235-202ENST00000421688 RANGAP1P46060 587 aaPredicted RBP28.2■■■□□ 2.11
TMEM235-202ENST00000421688 ANP32EQ9BTT0 268 aa28.13■■■□□ 2.09
TMEM235-202ENST00000421688 PEG3Q9GZU2 1588 aa28.1■■■□□ 2.09
TMEM235-202ENST00000421688 KANK4Q5T7N3 995 aaPredicted RBP27.99■■■□□ 2.07
TMEM235-202ENST00000421688 ARAP1Q96P48 1450 aa27.99■■■□□ 2.07
TMEM235-202ENST00000421688 RRBP1Q9P2E9 1410 aaKnown RBP27.97■■■□□ 2.07
TMEM235-202ENST00000421688 CUX2O14529 1486 aa27.94■■■□□ 2.06
TMEM235-202ENST00000421688 KCNH8Q96L42 1107 aa27.93■■■□□ 2.06
TMEM235-202ENST00000421688 ERICH3Q5RHP9 1530 aa27.92■■■□□ 2.06
TMEM235-202ENST00000421688 TOP2BQ02880 1626 aa27.91■■■□□ 2.06
TMEM235-202ENST00000421688 ATAD2BQ9ULI0 1458 aa27.87■■■□□ 2.05
TMEM235-202ENST00000421688 PRXQ9BXM0 1461 aa27.86■■■□□ 2.05
TMEM235-202ENST00000421688 BCANQ96GW7 911 aa27.84■■■□□ 2.05
TMEM235-202ENST00000421688 CCNB3Q8WWL7 1395 aa27.83■■■□□ 2.04
TMEM235-202ENST00000421688 FKBP8Q14318 412 aa27.79■■■□□ 2.04
TMEM235-202ENST00000421688 BIVM-ERCC5R4GMW8 1640 aa27.78■■■□□ 2.04
TMEM235-202ENST00000421688 BCL11AQ9H165 835 aa27.76■■■□□ 2.03
TMEM235-202ENST00000421688 MAPKBP1O60336 1514 aa27.74■■■□□ 2.03
TMEM235-202ENST00000421688 ITGAEP38570 1179 aa27.74■■■□□ 2.03
TMEM235-202ENST00000421688 RAB3GAP2Q9H2M9 1393 aa27.71■■■□□ 2.03
TMEM235-202ENST00000421688 DDX10Q13206 875 aaKnown RBP27.66■■■□□ 2.02
TMEM235-202ENST00000421688 RBM19Q9Y4C8 960 aaKnown RBP27.62■■■□□ 2.01
TMEM235-202ENST00000421688 ARHGAP35Q9NRY4 1499 aa27.61■■■□□ 2.01
TMEM235-202ENST00000421688 WDR97A6NE52 1622 aa27.61■■■□□ 2.01
TMEM235-202ENST00000421688 NEFLP07196 543 aa27.6■■■□□ 2.01
TMEM235-202ENST00000421688 KIF27Q86VH2 1401 aa27.54■■■□□ 2
TMEM235-202ENST00000421688 PPP1R15AO75807 674 aaPredicted RBP27.54■■■□□ 2
TMEM235-202ENST00000421688 SETD5Q9C0A6 1442 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms