RNA–Protein interactions for RNA: ENST00000320476.7

SCRIB-201, Transcript of scribbled planar cell polarity protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCRIB, Length 5,143 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-201ENST00000320476 DCAF8L2P0C7V8 631 aa31.14■■■□□ 2.58
SCRIB-201ENST00000320476 NISCHQ9Y2I1 1504 aa30.74■■■□□ 2.51
SCRIB-201ENST00000320476 SUPT5HO00267 1087 aaKnown RBP30.08■■■□□ 2.41
SCRIB-201ENST00000320476 SHROOM4Q9ULL8 1493 aa29.5■■■□□ 2.31
SCRIB-201ENST00000320476 PELP1Q8IZL8 1130 aaKnown RBP29.02■■■□□ 2.24
SCRIB-201ENST00000320476 MYT1Q01538 1121 aa28.82■■■□□ 2.2
SCRIB-201ENST00000320476 EHMT2Q96KQ7 1210 aa28.73■■■□□ 2.19
SCRIB-201ENST00000320476 PCGF6Q9BYE7 350 aa28.5■■■□□ 2.15
SCRIB-201ENST00000320476 APLP2Q06481 763 aa28.43■■■□□ 2.14
SCRIB-201ENST00000320476 FAM9AQ8IZU1 332 aaPredicted RBP28.26■■■□□ 2.11
SCRIB-201ENST00000320476 ZEB1P37275 1124 aaPredicted RBP28.24■■■□□ 2.11
SCRIB-201ENST00000320476 CENPBP07199 599 aaPredicted RBP28.02■■■□□ 2.08
SCRIB-201ENST00000320476 TRIM41Q8WV44 630 aa27.95■■■□□ 2.06
SCRIB-201ENST00000320476 TTBK1Q5TCY1 1321 aaPredicted RBP27.87■■■□□ 2.05
SCRIB-201ENST00000320476 CCER1Q8TC90 406 aaPredicted RBP27.83■■■□□ 2.05
SCRIB-201ENST00000320476 TRIM26Q12899 539 aaPredicted RBP27.46■■□□□ 1.99
SCRIB-201ENST00000320476 UBTFP17480 764 aaKnown RBP27.45■■□□□ 1.98
SCRIB-201ENST00000320476 HRCP23327 699 aa27.45■■□□□ 1.98
SCRIB-201ENST00000320476 RANGAP1P46060 587 aaPredicted RBP27.41■■□□□ 1.98
SCRIB-201ENST00000320476 ERICH6Q7L0X2 663 aa27.39■■□□□ 1.98
SCRIB-201ENST00000320476 NEFLP07196 543 aa27.17■■□□□ 1.94
SCRIB-201ENST00000320476 CHIC1Q5VXU3 224 aa27.16■■□□□ 1.94
SCRIB-201ENST00000320476 YTHDC1Q96MU7 727 aaKnown RBP27.16■■□□□ 1.94
SCRIB-201ENST00000320476 ATP1B4Q9UN42 357 aaPredicted RBP27.13■■□□□ 1.93
SCRIB-201ENST00000320476 PPARGC1BQ86YN6 1023 aaKnown RBP27.06■■□□□ 1.92
SCRIB-201ENST00000320476 ABCC9O60706 1549 aa27.05■■□□□ 1.92
SCRIB-201ENST00000320476 LOC105371045A0A1W2PR82 267 aa26.96■■□□□ 1.91
SCRIB-201ENST00000320476 PABPN1Q86U42 306 aaKnown RBP eCLIP26.61■■□□□ 1.854e-7■■□□□ 14.5
SCRIB-201ENST00000320476 HNRNPUL2Q1KMD3 747 aaKnown RBP26.55■■□□□ 1.84
SCRIB-201ENST00000320476 ITGAEP38570 1179 aa26.48■■□□□ 1.83
SCRIB-201ENST00000320476 DIEXFQ68CQ4 756 aaKnown RBP26.46■■□□□ 1.83
SCRIB-201ENST00000320476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.43■■□□□ 1.82
SCRIB-201ENST00000320476 DAXXQ9UER7 740 aaPredicted RBP26.19■■□□□ 1.78
SCRIB-201ENST00000320476 POLR3GLQ9BT43 218 aa26.14■■□□□ 1.78
SCRIB-201ENST00000320476 GTF3C3Q9Y5Q9 886 aa26■■□□□ 1.75
SCRIB-201ENST00000320476 FAM50AQ14320 339 aaKnown RBP25.9■■□□□ 1.74
SCRIB-201ENST00000320476 ZNF316A6NFI3 1004 aaPredicted RBP25.9■■□□□ 1.74
SCRIB-201ENST00000320476 CNGB1Q14028 1251 aaPredicted RBP25.84■■□□□ 1.73
SCRIB-201ENST00000320476 MYT1LQ9UL68 1186 aa25.83■■□□□ 1.73
SCRIB-201ENST00000320476 RTL5Q5HYW3 569 aaPredicted RBP25.82■■□□□ 1.72
SCRIB-201ENST00000320476 ACIN1Q9UKV3 1341 aaKnown RBP25.79■■□□□ 1.72
SCRIB-201ENST00000320476 NEUROD1Q13562 356 aa25.74■■□□□ 1.71
SCRIB-201ENST00000320476 ANP32CO43423 234 aa25.73■■□□□ 1.71
SCRIB-201ENST00000320476 DCAF1Q9Y4B6 1507 aa25.72■■□□□ 1.71
SCRIB-201ENST00000320476 TRIM52Q96A61 297 aa25.69■■□□□ 1.7
SCRIB-201ENST00000320476 CSRNP3Q8WYN3 585 aa25.64■■□□□ 1.69
SCRIB-201ENST00000320476 BCANQ96GW7 911 aa25.63■■□□□ 1.69
SCRIB-201ENST00000320476 CCDC180Q9P1Z9 1646 aa25.59■■□□□ 1.69
SCRIB-201ENST00000320476 CDK11AQ9UQ88 783 aaPredicted RBP25.58■■□□□ 1.69
SCRIB-201ENST00000320476 CLSPNQ9HAW4 1339 aa25.57■■□□□ 1.68
SCRIB-201ENST00000320476 SCRIBQ14160 1630 aa25.54■■□□□ 1.68
SCRIB-201ENST00000320476 FBLN2P98095 1184 aa25.54■■□□□ 1.68
SCRIB-201ENST00000320476 ZCCHC6Q5VYS8 1495 aaKnown RBP25.52■■□□□ 1.68
SCRIB-201ENST00000320476 SLC4A1APQ9BWU0 796 aaKnown RBP25.44■■□□□ 1.66
SCRIB-201ENST00000320476 RB1CC1Q8TDY2 1594 aa25.32■■□□□ 1.64
SCRIB-201ENST00000320476 ZNF326Q5BKZ1 582 aaKnown RBP25.32■■□□□ 1.64
SCRIB-201ENST00000320476 SCAF1Q9H7N4 1312 aaKnown RBP25.31■■□□□ 1.64
SCRIB-201ENST00000320476 P3H3Q8IVL6 736 aa25.16■■□□□ 1.62
SCRIB-201ENST00000320476 ANP32AP39687 249 aaKnown RBP25.14■■□□□ 1.61
SCRIB-201ENST00000320476 FKBP8Q14318 412 aa25.1■■□□□ 1.61
SCRIB-201ENST00000320476 TONSLQ96HA7 1378 aa25.09■■□□□ 1.61
SCRIB-201ENST00000320476 NACADO15069 1562 aa25.02■■□□□ 1.6
SCRIB-201ENST00000320476 CANXP27824 592 aaKnown RBP25■■□□□ 1.59
SCRIB-201ENST00000320476 ZBTB47Q9UFB7 747 aaPredicted RBP25■■□□□ 1.59
SCRIB-201ENST00000320476 DDX10Q13206 875 aaKnown RBP24.98■■□□□ 1.59
SCRIB-201ENST00000320476 MYO15BQ96JP2 1530 aa24.97■■□□□ 1.59
SCRIB-201ENST00000320476 HNRNPUQ00839 825 aaKnown RBP eCLIP24.95■■□□□ 1.58
SCRIB-201ENST00000320476 ARID3CA6NKF2 412 aa24.88■■□□□ 1.57
SCRIB-201ENST00000320476 GLIPR1L2Q4G1C9 344 aa24.86■■□□□ 1.57
SCRIB-201ENST00000320476 MIER1Q8N108 512 aa24.86■■□□□ 1.57
SCRIB-201ENST00000320476 ZNF777Q9ULD5 760 aaPredicted RBP24.84■■□□□ 1.57
SCRIB-201ENST00000320476 NEFMP07197 916 aa24.82■■□□□ 1.56
SCRIB-201ENST00000320476 NPM2Q86SE8 214 aaKnown RBP24.82■■□□□ 1.56
SCRIB-201ENST00000320476 CLIP1P30622 1438 aa24.82■■□□□ 1.56
SCRIB-201ENST00000320476 EEA1Q15075 1411 aa24.81■■□□□ 1.56
SCRIB-201ENST00000320476 ANP32EQ9BTT0 268 aa24.81■■□□□ 1.56
SCRIB-201ENST00000320476 EIF5BO60841 1220 aaKnown RBP24.8■■□□□ 1.56
SCRIB-201ENST00000320476 NPM1P06748 294 aaKnown RBP eCLIP24.79■■□□□ 1.56
SCRIB-201ENST00000320476 FAM9BQ8IZU0 186 aa24.79■■□□□ 1.56
SCRIB-201ENST00000320476 RSF1Q96T23 1441 aaPredicted RBP24.73■■□□□ 1.55
SCRIB-201ENST00000320476 CEP162Q5TB80 1403 aa24.71■■□□□ 1.55
SCRIB-201ENST00000320476 GOLGA3Q08378 1498 aa24.69■■□□□ 1.54
SCRIB-201ENST00000320476 BCL11AQ9H165 835 aa24.69■■□□□ 1.54
SCRIB-201ENST00000320476 CCDC136Q96JN2 1154 aa24.67■■□□□ 1.54
SCRIB-201ENST00000320476 TMC1Q8TDI8 760 aa24.64■■□□□ 1.54
SCRIB-201ENST00000320476 CHMP7Q8WUX9 453 aaPredicted RBP24.63■■□□□ 1.53
SCRIB-201ENST00000320476 MRS2Q9HD23 443 aa24.63■■□□□ 1.53
SCRIB-201ENST00000320476 MTUS2Q5JR59 1369 aa24.6■■□□□ 1.53
SCRIB-201ENST00000320476 UPF2Q9HAU5 1272 aaKnown RBP24.6■■□□□ 1.53
SCRIB-201ENST00000320476 CHIC2Q9UKJ5 165 aa24.59■■□□□ 1.53
SCRIB-201ENST00000320476 TNIKQ9UKE5 1360 aa24.57■■□□□ 1.52
SCRIB-201ENST00000320476 BAZ1BQ9UIG0 1483 aaKnown RBP24.55■■□□□ 1.52
SCRIB-201ENST00000320476 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.54■■□□□ 1.52
SCRIB-201ENST00000320476 EIF4G2P78344 907 aaKnown RBP eCLIP24.52■■□□□ 1.52
SCRIB-201ENST00000320476 ESF1Q9H501 851 aaKnown RBP24.51■■□□□ 1.51
SCRIB-201ENST00000320476 ANP32BQ92688 251 aaKnown RBP24.5■■□□□ 1.51
SCRIB-201ENST00000320476 ERCC6Q03468 1493 aa24.48■■□□□ 1.51
SCRIB-201ENST00000320476 SALL2Q9Y467 1007 aaPredicted RBP24.48■■□□□ 1.51
SCRIB-201ENST00000320476 WRNQ14191 1432 aaPredicted RBP eCLIP24.46■■□□□ 1.51
SCRIB-201ENST00000320476 SLC24A1O60721 1099 aa24.45■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms