RNA–Protein interactions for RNA: ENST00000619360.4

NFKBIE-204, Transcript of NFKB inhibitor epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFKBIE, Length 2,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIE-204ENST00000619360 NISCHQ9Y2I1 1504 aa43.1■■■■■ 4.49
NFKBIE-204ENST00000619360 CCDC180Q9P1Z9 1646 aa37.03■■■■□ 3.52
NFKBIE-204ENST00000619360 ZCCHC6Q5VYS8 1495 aaKnown RBP36.32■■■■□ 3.4
NFKBIE-204ENST00000619360 SHROOM4Q9ULL8 1493 aa36.08■■■■□ 3.37
NFKBIE-204ENST00000619360 DCAF8L2P0C7V8 631 aa35.83■■■■□ 3.33
NFKBIE-204ENST00000619360 DCAF1Q9Y4B6 1507 aa35.48■■■■□ 3.27
NFKBIE-204ENST00000619360 SUPT5HO00267 1087 aaKnown RBP35.15■■■■□ 3.22
NFKBIE-204ENST00000619360 MYO15BQ96JP2 1530 aa34.73■■■■□ 3.15
NFKBIE-204ENST00000619360 ABCC9O60706 1549 aa34.68■■■■□ 3.14
NFKBIE-204ENST00000619360 SCRIBQ14160 1630 aa34.43■■■■□ 3.1
NFKBIE-204ENST00000619360 NACADO15069 1562 aa34.4■■■■□ 3.1
NFKBIE-204ENST00000619360 RB1CC1Q8TDY2 1594 aa33.96■■■■□ 3.03
NFKBIE-204ENST00000619360 CHIC1Q5VXU3 224 aa33.91■■■■□ 3.02
NFKBIE-204ENST00000619360 RSF1Q96T23 1441 aaPredicted RBP33.82■■■■□ 3
NFKBIE-204ENST00000619360 CECR2Q9BXF3 1484 aa33.55■■■□□ 2.96
NFKBIE-204ENST00000619360 MROH2BQ7Z745 1585 aa33.4■■■□□ 2.94
NFKBIE-204ENST00000619360 UNC13AQ9UPW8 1703 aa33.25■■■□□ 2.91
NFKBIE-204ENST00000619360 BAZ1AQ9NRL2 1556 aaPredicted RBP33.2■■■□□ 2.9
NFKBIE-204ENST00000619360 WIZO95785 1651 aa33.16■■■□□ 2.9
NFKBIE-204ENST00000619360 PABPN1Q86U42 306 aaKnown RBP eCLIP33■■■□□ 2.87
NFKBIE-204ENST00000619360 SMARCA4P51532 1647 aa32.94■■■□□ 2.86
NFKBIE-204ENST00000619360 BICRAQ9NZM4 1560 aa32.92■■■□□ 2.86
NFKBIE-204ENST00000619360 TRIM41Q8WV44 630 aa32.91■■■□□ 2.86
NFKBIE-204ENST00000619360 LOC105371045A0A1W2PR82 267 aa32.79■■■□□ 2.84
NFKBIE-204ENST00000619360 TOP2AP11388 1531 aaKnown RBP32.75■■■□□ 2.83
NFKBIE-204ENST00000619360 CCDC88BA6NC98 1476 aa32.55■■■□□ 2.8
NFKBIE-204ENST00000619360 SMARCA2P51531 1590 aa32.49■■■□□ 2.79
NFKBIE-204ENST00000619360 FAM9AQ8IZU1 332 aaPredicted RBP32.47■■■□□ 2.79
NFKBIE-204ENST00000619360 EIF4G1Q04637 1599 aaKnown RBP32.44■■■□□ 2.78
NFKBIE-204ENST00000619360 PEG3Q9GZU2 1588 aa32.39■■■□□ 2.78
NFKBIE-204ENST00000619360 ATAD2BQ9ULI0 1458 aa32.26■■■□□ 2.76
NFKBIE-204ENST00000619360 BAZ1BQ9UIG0 1483 aaKnown RBP32.16■■■□□ 2.74
NFKBIE-204ENST00000619360 ABCC8Q09428 1581 aa32.15■■■□□ 2.74
NFKBIE-204ENST00000619360 PCGF6Q9BYE7 350 aa32.15■■■□□ 2.74
NFKBIE-204ENST00000619360 EHMT2Q96KQ7 1210 aa32.11■■■□□ 2.73
NFKBIE-204ENST00000619360 WRNQ14191 1432 aaPredicted RBP eCLIP31.83■■■□□ 2.69
NFKBIE-204ENST00000619360 TRIM26Q12899 539 aaPredicted RBP31.83■■■□□ 2.69
NFKBIE-204ENST00000619360 NCAPD3P42695 1498 aa31.81■■■□□ 2.68
NFKBIE-204ENST00000619360 SOGA1O94964 1423 aa31.76■■■□□ 2.67
NFKBIE-204ENST00000619360 HRCP23327 699 aa31.76■■■□□ 2.67
NFKBIE-204ENST00000619360 HMGXB3Q12766 1538 aa31.75■■■□□ 2.67
NFKBIE-204ENST00000619360 EEA1Q15075 1411 aa31.7■■■□□ 2.67
NFKBIE-204ENST00000619360 CSRNP3Q8WYN3 585 aa31.64■■■□□ 2.66
NFKBIE-204ENST00000619360 SYNJ1O43426 1573 aa31.6■■■□□ 2.65
NFKBIE-204ENST00000619360 RUSC2Q8N2Y8 1516 aa31.59■■■□□ 2.65
NFKBIE-204ENST00000619360 TNIKQ9UKE5 1360 aa31.44■■■□□ 2.62
NFKBIE-204ENST00000619360 UBTFP17480 764 aaKnown RBP31.43■■■□□ 2.62
NFKBIE-204ENST00000619360 GOLGA3Q08378 1498 aa31.37■■■□□ 2.61
NFKBIE-204ENST00000619360 CEP162Q5TB80 1403 aa31.36■■■□□ 2.61
NFKBIE-204ENST00000619360 TOP2BQ02880 1626 aa31.36■■■□□ 2.61
NFKBIE-204ENST00000619360 CFTRP13569 1480 aa31.34■■■□□ 2.61
NFKBIE-204ENST00000619360 PPARGC1BQ86YN6 1023 aaKnown RBP31.3■■■□□ 2.6
NFKBIE-204ENST00000619360 CEP164Q9UPV0 1460 aa31.28■■■□□ 2.6
NFKBIE-204ENST00000619360 CC2D2AQ9P2K1 1620 aa31.27■■■□□ 2.6
NFKBIE-204ENST00000619360 BIVM-ERCC5R4GMW8 1640 aa31.26■■■□□ 2.59
NFKBIE-204ENST00000619360 KIF21BO75037 1637 aa31.2■■■□□ 2.59
NFKBIE-204ENST00000619360 CUX1P39880 1505 aa31.15■■■□□ 2.58
NFKBIE-204ENST00000619360 CADPSQ9ULU8 1353 aa31.14■■■□□ 2.57
NFKBIE-204ENST00000619360 PRDM2Q13029 1718 aa31.04■■■□□ 2.56
NFKBIE-204ENST00000619360 RAPGEF2Q9Y4G8 1499 aa31.03■■■□□ 2.56
NFKBIE-204ENST00000619360 CLIP1P30622 1438 aa30.95■■■□□ 2.55
NFKBIE-204ENST00000619360 KIF27Q86VH2 1401 aa30.95■■■□□ 2.55
NFKBIE-204ENST00000619360 ZEB1P37275 1124 aaPredicted RBP30.94■■■□□ 2.54
NFKBIE-204ENST00000619360 TTBK1Q5TCY1 1321 aaPredicted RBP30.92■■■□□ 2.54
NFKBIE-204ENST00000619360 PRXQ9BXM0 1461 aa30.87■■■□□ 2.53
NFKBIE-204ENST00000619360 ERICH3Q5RHP9 1530 aa30.85■■■□□ 2.53
NFKBIE-204ENST00000619360 RANGAP1P46060 587 aaPredicted RBP30.84■■■□□ 2.53
NFKBIE-204ENST00000619360 FANCD2Q9BXW9 1451 aa30.8■■■□□ 2.52
NFKBIE-204ENST00000619360 VPS8Q8N3P4 1428 aa30.74■■■□□ 2.51
NFKBIE-204ENST00000619360 CUX2O14529 1486 aa30.73■■■□□ 2.51
NFKBIE-204ENST00000619360 FGD5Q6ZNL6 1462 aa30.72■■■□□ 2.51
NFKBIE-204ENST00000619360 APLP2Q06481 763 aa30.68■■■□□ 2.5
NFKBIE-204ENST00000619360 NESP48681 1621 aa30.67■■■□□ 2.5
NFKBIE-204ENST00000619360 IGF1RP08069 1367 aa30.62■■■□□ 2.49
NFKBIE-204ENST00000619360 DNMBPQ6XZF7 1577 aa30.56■■■□□ 2.48
NFKBIE-204ENST00000619360 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.56■■■□□ 2.48
NFKBIE-204ENST00000619360 LAMC3Q9Y6N6 1575 aa30.56■■■□□ 2.48
NFKBIE-204ENST00000619360 CCER1Q8TC90 406 aaPredicted RBP30.54■■■□□ 2.48
NFKBIE-204ENST00000619360 TOPBP1Q92547 1522 aa30.52■■■□□ 2.48
NFKBIE-204ENST00000619360 CARMIL1Q5VZK9 1371 aa30.51■■■□□ 2.47
NFKBIE-204ENST00000619360 ARAP1Q96P48 1450 aa30.48■■■□□ 2.47
NFKBIE-204ENST00000619360 DNAJC5BQ9UF47 199 aa30.46■■■□□ 2.47
NFKBIE-204ENST00000619360 RAD54L2Q9Y4B4 1467 aa30.44■■■□□ 2.46
NFKBIE-204ENST00000619360 POLA1P09884 1462 aaPredicted RBP30.44■■■□□ 2.46
NFKBIE-204ENST00000619360 PDS5BQ9NTI5 1447 aa30.42■■■□□ 2.46
NFKBIE-204ENST00000619360 ABCA10Q8WWZ4 1543 aa30.39■■■□□ 2.46
NFKBIE-204ENST00000619360 ARHGAP35Q9NRY4 1499 aa30.34■■■□□ 2.45
NFKBIE-204ENST00000619360 URB2Q14146 1524 aaKnown RBP30.34■■■□□ 2.45
NFKBIE-204ENST00000619360 HNRNPUL2Q1KMD3 747 aaKnown RBP30.27■■■□□ 2.44
NFKBIE-204ENST00000619360 KANK4Q5T7N3 995 aaPredicted RBP30.21■■■□□ 2.43
NFKBIE-204ENST00000619360 KIF21AQ7Z4S6 1674 aa30.16■■■□□ 2.42
NFKBIE-204ENST00000619360 CUL7Q14999 1698 aa30.15■■■□□ 2.42
NFKBIE-204ENST00000619360 TDRD9Q8NDG6 1382 aaKnown RBP30.13■■■□□ 2.41
NFKBIE-204ENST00000619360 WDR97A6NE52 1622 aa30.11■■■□□ 2.41
NFKBIE-204ENST00000619360 GAPVD1Q14C86 1478 aa30.06■■■□□ 2.4
NFKBIE-204ENST00000619360 P3H3Q8IVL6 736 aa30.05■■■□□ 2.4
NFKBIE-204ENST00000619360 ABCA5Q8WWZ7 1642 aa30.03■■■□□ 2.4
NFKBIE-204ENST00000619360 FHAD1B1AJZ9 1412 aa30.01■■■□□ 2.39
NFKBIE-204ENST00000619360 MAP3K1Q13233 1512 aa29.94■■■□□ 2.38
NFKBIE-204ENST00000619360 MRC2Q9UBG0 1479 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms