RNA–Protein interactions for RNA: ENST00000543795.5

MVB12A-212, Transcript of multivesicular body subunit 12A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MVB12A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12A-212ENST00000543795 NISCHQ9Y2I1 1504 aa51.07■■■■■ 5.77
MVB12A-212ENST00000543795 CCDC180Q9P1Z9 1646 aa45.41■■■■■ 4.86
MVB12A-212ENST00000543795 ABCC9O60706 1549 aa44.53■■■■■ 4.72
MVB12A-212ENST00000543795 RB1CC1Q8TDY2 1594 aa42.83■■■■■ 4.45
MVB12A-212ENST00000543795 NACADO15069 1562 aa42.78■■■■■ 4.44
MVB12A-212ENST00000543795 DCAF8L2P0C7V8 631 aa42.76■■■■■ 4.44
MVB12A-212ENST00000543795 MYO15BQ96JP2 1530 aa42.55■■■■■ 4.4
MVB12A-212ENST00000543795 ZCCHC6Q5VYS8 1495 aaKnown RBP42.49■■■■■ 4.39
MVB12A-212ENST00000543795 DCAF1Q9Y4B6 1507 aa42.3■■■■■ 4.36
MVB12A-212ENST00000543795 UNC13AQ9UPW8 1703 aa41.76■■■■■ 4.28
MVB12A-212ENST00000543795 PABPN1Q86U42 306 aaKnown RBP eCLIP41.65■■■■■ 4.26
MVB12A-212ENST00000543795 BICRAQ9NZM4 1560 aa41.5■■■■■ 4.23
MVB12A-212ENST00000543795 SCRIBQ14160 1630 aa41.36■■■■■ 4.21
MVB12A-212ENST00000543795 SHROOM4Q9ULL8 1493 aa41.14■■■■■ 4.18
MVB12A-212ENST00000543795 DNAJC5BQ9UF47 199 aa41.06■■■■■ 4.16
MVB12A-212ENST00000543795 EIF4G1Q04637 1599 aaKnown RBP40.42■■■■■ 4.06
MVB12A-212ENST00000543795 CC2D2AQ9P2K1 1620 aa40.27■■■■■ 4.04
MVB12A-212ENST00000543795 CECR2Q9BXF3 1484 aa40.07■■■■■ 4
MVB12A-212ENST00000543795 SMARCA4P51532 1647 aa39.6■■■■□ 3.93
MVB12A-212ENST00000543795 BAZ1AQ9NRL2 1556 aaPredicted RBP39.59■■■■□ 3.93
MVB12A-212ENST00000543795 NCAPD3P42695 1498 aa39.52■■■■□ 3.92
MVB12A-212ENST00000543795 ATAD2BQ9ULI0 1458 aa39.47■■■■□ 3.91
MVB12A-212ENST00000543795 SMARCA2P51531 1590 aa39.42■■■■□ 3.9
MVB12A-212ENST00000543795 MROH2BQ7Z745 1585 aa39.33■■■■□ 3.89
MVB12A-212ENST00000543795 PEG3Q9GZU2 1588 aa39.27■■■■□ 3.88
MVB12A-212ENST00000543795 HMGXB3Q12766 1538 aa39.24■■■■□ 3.87
MVB12A-212ENST00000543795 BAZ1BQ9UIG0 1483 aaKnown RBP39.11■■■■□ 3.85
MVB12A-212ENST00000543795 RSF1Q96T23 1441 aaPredicted RBP38.89■■■■□ 3.82
MVB12A-212ENST00000543795 WIZO95785 1651 aa38.86■■■■□ 3.81
MVB12A-212ENST00000543795 NESP48681 1621 aa38.49■■■■□ 3.75
MVB12A-212ENST00000543795 TOP2AP11388 1531 aaKnown RBP38.47■■■■□ 3.75
MVB12A-212ENST00000543795 LAMC3Q9Y6N6 1575 aa38.44■■■■□ 3.74
MVB12A-212ENST00000543795 ERCC6Q03468 1493 aa38.41■■■■□ 3.74
MVB12A-212ENST00000543795 CADPSQ9ULU8 1353 aa38.35■■■■□ 3.73
MVB12A-212ENST00000543795 PDS5BQ9NTI5 1447 aa38.23■■■■□ 3.71
MVB12A-212ENST00000543795 CUX2O14529 1486 aa38.09■■■■□ 3.69
MVB12A-212ENST00000543795 CFTRP13569 1480 aa38.08■■■■□ 3.69
MVB12A-212ENST00000543795 CCDC88BA6NC98 1476 aa38.06■■■■□ 3.68
MVB12A-212ENST00000543795 KIF21AQ7Z4S6 1674 aa37.99■■■■□ 3.67
MVB12A-212ENST00000543795 THOC2Q8NI27 1593 aaKnown RBP37.9■■■■□ 3.66
MVB12A-212ENST00000543795 FANCD2Q9BXW9 1451 aa37.85■■■■□ 3.65
MVB12A-212ENST00000543795 SUPT5HO00267 1087 aaKnown RBP37.81■■■■□ 3.64
MVB12A-212ENST00000543795 CEP164Q9UPV0 1460 aa37.81■■■■□ 3.64
MVB12A-212ENST00000543795 MRC2Q9UBG0 1479 aa37.78■■■■□ 3.64
MVB12A-212ENST00000543795 PRDM2Q13029 1718 aa37.67■■■■□ 3.62
MVB12A-212ENST00000543795 WDR62O43379 1518 aa37.65■■■■□ 3.62
MVB12A-212ENST00000543795 URB2Q14146 1524 aaKnown RBP37.46■■■■□ 3.59
MVB12A-212ENST00000543795 ABCC8Q09428 1581 aa37.31■■■■□ 3.56
MVB12A-212ENST00000543795 TOPBP1Q92547 1522 aa37.23■■■■□ 3.55
MVB12A-212ENST00000543795 DNMBPQ6XZF7 1577 aa37.17■■■■□ 3.54
MVB12A-212ENST00000543795 DNAJC5Q9H3Z4 198 aa37.14■■■■□ 3.54
MVB12A-212ENST00000543795 IFT140Q96RY7 1462 aa37.06■■■■□ 3.52
MVB12A-212ENST00000543795 POLA1P09884 1462 aaPredicted RBP36.9■■■■□ 3.5
MVB12A-212ENST00000543795 CUX1P39880 1505 aa36.88■■■■□ 3.49
MVB12A-212ENST00000543795 ZNF608Q9ULD9 1512 aaPredicted RBP36.85■■■■□ 3.49
MVB12A-212ENST00000543795 TARBP1Q13395 1621 aaKnown RBP36.81■■■■□ 3.48
MVB12A-212ENST00000543795 SOGA1O94964 1423 aa36.81■■■■□ 3.48
MVB12A-212ENST00000543795 FGD5Q6ZNL6 1462 aa36.79■■■■□ 3.48
MVB12A-212ENST00000543795 RAD54L2Q9Y4B4 1467 aa36.74■■■■□ 3.47
MVB12A-212ENST00000543795 AQRO60306 1485 aaKnown RBP eCLIP36.66■■■■□ 3.467e-8■■■■□ 23.6
MVB12A-212ENST00000543795 WRNQ14191 1432 aaPredicted RBP eCLIP36.66■■■■□ 3.469e-6■■■■■ 50.1
MVB12A-212ENST00000543795 EIF4G3O43432 1585 aaKnown RBP36.65■■■■□ 3.46
MVB12A-212ENST00000543795 TDRD9Q8NDG6 1382 aaKnown RBP36.59■■■■□ 3.45
MVB12A-212ENST00000543795 OSCARQ8IYS5 282 aa36.59■■■■□ 3.45
MVB12A-212ENST00000543795 WDR97A6NE52 1622 aa36.56■■■■□ 3.44
MVB12A-212ENST00000543795 TOP2BQ02880 1626 aa36.56■■■■□ 3.44
MVB12A-212ENST00000543795 BIVM-ERCC5R4GMW8 1640 aa36.53■■■■□ 3.44
MVB12A-212ENST00000543795 SYNJ1O43426 1573 aa36.49■■■■□ 3.43
MVB12A-212ENST00000543795 ABCA10Q8WWZ4 1543 aa36.47■■■■□ 3.43
MVB12A-212ENST00000543795 GRIN2BQ13224 1484 aa36.37■■■■□ 3.41
MVB12A-212ENST00000543795 GAPVD1Q14C86 1478 aa36.36■■■■□ 3.41
MVB12A-212ENST00000543795 MAGI1Q96QZ7 1491 aaPredicted RBP36.29■■■■□ 3.4
MVB12A-212ENST00000543795 SNAPC4Q5SXM2 1469 aa36.27■■■■□ 3.4
MVB12A-212ENST00000543795 FBLN2P98095 1184 aa36.27■■■■□ 3.4
MVB12A-212ENST00000543795 ABCA5Q8WWZ7 1642 aa36.26■■■■□ 3.4
MVB12A-212ENST00000543795 CHD1O14646 1710 aa36.2■■■■□ 3.39
MVB12A-212ENST00000543795 CHMP7Q8WUX9 453 aaPredicted RBP36.2■■■■□ 3.39
MVB12A-212ENST00000543795 PBRM1Q86U86 1689 aa36.18■■■■□ 3.38
MVB12A-212ENST00000543795 SYNJ2O15056 1496 aa36.14■■■■□ 3.38
MVB12A-212ENST00000543795 ERICH3Q5RHP9 1530 aa36.03■■■■□ 3.36
MVB12A-212ENST00000543795 FHAD1B1AJZ9 1412 aa35.95■■■■□ 3.35
MVB12A-212ENST00000543795 KIF27Q86VH2 1401 aa35.93■■■■□ 3.34
MVB12A-212ENST00000543795 ADAMTS12P58397 1594 aa35.91■■■■□ 3.34
MVB12A-212ENST00000543795 GRIN2AQ12879 1464 aa35.88■■■■□ 3.33
MVB12A-212ENST00000543795 CLASP1Q7Z460 1538 aa35.86■■■■□ 3.33
MVB12A-212ENST00000543795 ARHGEF11O15085 1522 aa35.85■■■■□ 3.33
MVB12A-212ENST00000543795 RIMBP3CA6NJZ7 1639 aa35.84■■■■□ 3.33
MVB12A-212ENST00000543795 RIMBP3BA6NNM3 1639 aa35.84■■■■□ 3.33
MVB12A-212ENST00000543795 RIMBP3Q9UFD9 1639 aa35.84■■■■□ 3.33
MVB12A-212ENST00000543795 IGF1RP08069 1367 aa35.82■■■■□ 3.32
MVB12A-212ENST00000543795 TRIM41Q8WV44 630 aa35.77■■■■□ 3.32
MVB12A-212ENST00000543795 NUP160Q12769 1436 aa35.74■■■■□ 3.31
MVB12A-212ENST00000543795 CEP170Q5SW79 1584 aa35.66■■■■□ 3.3
MVB12A-212ENST00000543795 CUL7Q14999 1698 aa35.63■■■■□ 3.29
MVB12A-212ENST00000543795 CYB5RLQ6IPT4 315 aa35.62■■■■□ 3.29
MVB12A-212ENST00000543795 CARMIL1Q5VZK9 1371 aa35.6■■■■□ 3.29
MVB12A-212ENST00000543795 ARAP1Q96P48 1450 aa35.54■■■■□ 3.28
MVB12A-212ENST00000543795 RUSC2Q8N2Y8 1516 aa35.5■■■■□ 3.27
MVB12A-212ENST00000543795 JPH4Q96JJ6 628 aa35.46■■■■□ 3.27
MVB12A-212ENST00000543795 SHROOM2Q13796 1616 aa35.45■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms