RNA–Protein interactions for RNA: ENST00000533063.5

GSDMD-212, Transcript of gasdermin D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,800 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-212ENST00000533063 NISCHQ9Y2I1 1504 aa47.08■■■■■ 5.13
GSDMD-212ENST00000533063 CCDC180Q9P1Z9 1646 aa41.24■■■■■ 4.19
GSDMD-212ENST00000533063 ZCCHC6Q5VYS8 1495 aaKnown RBP39.5■■■■□ 3.91
GSDMD-212ENST00000533063 ABCC9O60706 1549 aa39.26■■■■□ 3.88
GSDMD-212ENST00000533063 DCAF1Q9Y4B6 1507 aa38.94■■■■□ 3.82
GSDMD-212ENST00000533063 DCAF8L2P0C7V8 631 aa38.83■■■■□ 3.81
GSDMD-212ENST00000533063 MYO15BQ96JP2 1530 aa38.61■■■■□ 3.77
GSDMD-212ENST00000533063 NACADO15069 1562 aa38.45■■■■□ 3.75
GSDMD-212ENST00000533063 RB1CC1Q8TDY2 1594 aa38.19■■■■□ 3.7
GSDMD-212ENST00000533063 SHROOM4Q9ULL8 1493 aa38.07■■■■□ 3.68
GSDMD-212ENST00000533063 SCRIBQ14160 1630 aa37.84■■■■□ 3.65
GSDMD-212ENST00000533063 UNC13AQ9UPW8 1703 aa37.55■■■■□ 3.6
GSDMD-212ENST00000533063 BICRAQ9NZM4 1560 aa37.15■■■■□ 3.54
GSDMD-212ENST00000533063 PABPN1Q86U42 306 aaKnown RBP eCLIP36.92■■■■□ 3.55e-7■■■■■ 27.2
GSDMD-212ENST00000533063 CECR2Q9BXF3 1484 aa36.63■■■■□ 3.45
GSDMD-212ENST00000533063 SUPT5HO00267 1087 aaKnown RBP36.41■■■■□ 3.42
GSDMD-212ENST00000533063 RSF1Q96T23 1441 aaPredicted RBP36.37■■■■□ 3.41
GSDMD-212ENST00000533063 MROH2BQ7Z745 1585 aa36.37■■■■□ 3.41
GSDMD-212ENST00000533063 BAZ1AQ9NRL2 1556 aaPredicted RBP36.35■■■■□ 3.41
GSDMD-212ENST00000533063 SMARCA4P51532 1647 aa36.28■■■■□ 3.4
GSDMD-212ENST00000533063 WIZO95785 1651 aa36.07■■■■□ 3.36
GSDMD-212ENST00000533063 EIF4G1Q04637 1599 aaKnown RBP36■■■■□ 3.35
GSDMD-212ENST00000533063 PEG3Q9GZU2 1588 aa35.88■■■■□ 3.33
GSDMD-212ENST00000533063 ATAD2BQ9ULI0 1458 aa35.75■■■■□ 3.31
GSDMD-212ENST00000533063 SMARCA2P51531 1590 aa35.69■■■■□ 3.3
GSDMD-212ENST00000533063 TOP2AP11388 1531 aaKnown RBP35.65■■■■□ 3.3
GSDMD-212ENST00000533063 CC2D2AQ9P2K1 1620 aa35.56■■■■□ 3.28
GSDMD-212ENST00000533063 NCAPD3P42695 1498 aa35.5■■■■□ 3.27
GSDMD-212ENST00000533063 BAZ1BQ9UIG0 1483 aaKnown RBP35.49■■■■□ 3.27
GSDMD-212ENST00000533063 HMGXB3Q12766 1538 aa35.43■■■■□ 3.26
GSDMD-212ENST00000533063 CCDC88BA6NC98 1476 aa35.28■■■■□ 3.24
GSDMD-212ENST00000533063 DNAJC5BQ9UF47 199 aa35■■■■□ 3.19
GSDMD-212ENST00000533063 CHIC1Q5VXU3 224 aa34.72■■■■□ 3.15
GSDMD-212ENST00000533063 CFTRP13569 1480 aa34.62■■■■□ 3.13
GSDMD-212ENST00000533063 CADPSQ9ULU8 1353 aa34.54■■■■□ 3.12
GSDMD-212ENST00000533063 PRDM2Q13029 1718 aa34.48■■■■□ 3.11
GSDMD-212ENST00000533063 ABCC8Q09428 1581 aa34.44■■■■□ 3.1
GSDMD-212ENST00000533063 NESP48681 1621 aa34.4■■■■□ 3.1
GSDMD-212ENST00000533063 LAMC3Q9Y6N6 1575 aa34.35■■■■□ 3.09
GSDMD-212ENST00000533063 TRIM41Q8WV44 630 aa34.25■■■■□ 3.07
GSDMD-212ENST00000533063 WRNQ14191 1432 aaPredicted RBP eCLIP34.2■■■■□ 3.07
GSDMD-212ENST00000533063 FANCD2Q9BXW9 1451 aa34.16■■■■□ 3.06
GSDMD-212ENST00000533063 SYNJ1O43426 1573 aa34.15■■■■□ 3.06
GSDMD-212ENST00000533063 PDS5BQ9NTI5 1447 aa34.03■■■■□ 3.04
GSDMD-212ENST00000533063 CUX1P39880 1505 aa34.03■■■■□ 3.04
GSDMD-212ENST00000533063 TOP2BQ02880 1626 aa34.02■■■■□ 3.04
GSDMD-212ENST00000533063 KIF21AQ7Z4S6 1674 aa34.02■■■■□ 3.04
GSDMD-212ENST00000533063 BIVM-ERCC5R4GMW8 1640 aa34.02■■■■□ 3.04
GSDMD-212ENST00000533063 CEP164Q9UPV0 1460 aa33.96■■■■□ 3.03
GSDMD-212ENST00000533063 DNMBPQ6XZF7 1577 aa33.81■■■■□ 3
GSDMD-212ENST00000533063 URB2Q14146 1524 aaKnown RBP33.8■■■■□ 3
GSDMD-212ENST00000533063 TOPBP1Q92547 1522 aa33.77■■■■□ 3
GSDMD-212ENST00000533063 SOGA1O94964 1423 aa33.7■■■□□ 2.99
GSDMD-212ENST00000533063 FGD5Q6ZNL6 1462 aa33.69■■■□□ 2.98
GSDMD-212ENST00000533063 MRC2Q9UBG0 1479 aa33.66■■■□□ 2.98
GSDMD-212ENST00000533063 ERCC6Q03468 1493 aa33.63■■■□□ 2.97
GSDMD-212ENST00000533063 RUSC2Q8N2Y8 1516 aa33.63■■■□□ 2.97
GSDMD-212ENST00000533063 FAM9AQ8IZU1 332 aaPredicted RBP33.61■■■□□ 2.97
GSDMD-212ENST00000533063 POLA1P09884 1462 aaPredicted RBP33.59■■■□□ 2.97
GSDMD-212ENST00000533063 THOC2Q8NI27 1593 aaKnown RBP33.55■■■□□ 2.96
GSDMD-212ENST00000533063 WDR62O43379 1518 aa33.54■■■□□ 2.96
GSDMD-212ENST00000533063 EEA1Q15075 1411 aa33.49■■■□□ 2.95
GSDMD-212ENST00000533063 RAD54L2Q9Y4B4 1467 aa33.47■■■□□ 2.95
GSDMD-212ENST00000533063 WDR97A6NE52 1622 aa33.39■■■□□ 2.94
GSDMD-212ENST00000533063 ABCA10Q8WWZ4 1543 aa33.38■■■□□ 2.93
GSDMD-212ENST00000533063 LOC105371045A0A1W2PR82 267 aa33.38■■■□□ 2.93
GSDMD-212ENST00000533063 CUX2O14529 1486 aa33.36■■■□□ 2.93
GSDMD-212ENST00000533063 TARBP1Q13395 1621 aaKnown RBP33.35■■■□□ 2.93
GSDMD-212ENST00000533063 KIF27Q86VH2 1401 aa33.35■■■□□ 2.93
GSDMD-212ENST00000533063 CSRNP3Q8WYN3 585 aa33.34■■■□□ 2.93
GSDMD-212ENST00000533063 ABCA5Q8WWZ7 1642 aa33.19■■■□□ 2.9
GSDMD-212ENST00000533063 IFT140Q96RY7 1462 aa33.17■■■□□ 2.9
GSDMD-212ENST00000533063 KIF21BO75037 1637 aa33.15■■■□□ 2.9
GSDMD-212ENST00000533063 TDRD9Q8NDG6 1382 aaKnown RBP33.14■■■□□ 2.9
GSDMD-212ENST00000533063 IGF1RP08069 1367 aa33.14■■■□□ 2.9
GSDMD-212ENST00000533063 EHMT2Q96KQ7 1210 aa33.14■■■□□ 2.9
GSDMD-212ENST00000533063 PRXQ9BXM0 1461 aa33.1■■■□□ 2.89
GSDMD-212ENST00000533063 GAPVD1Q14C86 1478 aa33.06■■■□□ 2.88
GSDMD-212ENST00000533063 ZNF608Q9ULD9 1512 aaPredicted RBP33.06■■■□□ 2.88
GSDMD-212ENST00000533063 RAPGEF2Q9Y4G8 1499 aa33.03■■■□□ 2.88
GSDMD-212ENST00000533063 GOLGA3Q08378 1498 aa33.02■■■□□ 2.88
GSDMD-212ENST00000533063 AQRO60306 1485 aaKnown RBP eCLIP33.02■■■□□ 2.88
GSDMD-212ENST00000533063 ERICH3Q5RHP9 1530 aa32.98■■■□□ 2.87
GSDMD-212ENST00000533063 PBRM1Q86U86 1689 aa32.97■■■□□ 2.87
GSDMD-212ENST00000533063 EIF4G3O43432 1585 aaKnown RBP32.95■■■□□ 2.87
GSDMD-212ENST00000533063 CARMIL1Q5VZK9 1371 aa32.93■■■□□ 2.86
GSDMD-212ENST00000533063 CUL7Q14999 1698 aa32.92■■■□□ 2.86
GSDMD-212ENST00000533063 TNIKQ9UKE5 1360 aa32.86■■■□□ 2.85
GSDMD-212ENST00000533063 GRIN2BQ13224 1484 aa32.85■■■□□ 2.85
GSDMD-212ENST00000533063 UBTFP17480 764 aaKnown RBP32.83■■■□□ 2.85
GSDMD-212ENST00000533063 ADAMTS12P58397 1594 aa32.75■■■□□ 2.83
GSDMD-212ENST00000533063 SNAPC4Q5SXM2 1469 aa32.7■■■□□ 2.82
GSDMD-212ENST00000533063 FHAD1B1AJZ9 1412 aa32.69■■■□□ 2.82
GSDMD-212ENST00000533063 CEP162Q5TB80 1403 aa32.67■■■□□ 2.82
GSDMD-212ENST00000533063 MAGI1Q96QZ7 1491 aaPredicted RBP32.63■■■□□ 2.81
GSDMD-212ENST00000533063 CTTNBP2Q8WZ74 1663 aa32.54■■■□□ 2.8
GSDMD-212ENST00000533063 SYNJ2O15056 1496 aa32.51■■■□□ 2.79
GSDMD-212ENST00000533063 CLIP1P30622 1438 aa32.49■■■□□ 2.79
GSDMD-212ENST00000533063 GRIN2AQ12879 1464 aa32.48■■■□□ 2.79
GSDMD-212ENST00000533063 RANGAP1P46060 587 aaPredicted RBP32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms