RNA–Protein interactions for RNA: ENST00000617138.4

MDK-213, Transcript of midkine, humanhuman

TSL 2 BASIC

Gene MDK, Length 635 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDK-213ENST00000617138 NISCHQ9Y2I1 1504 aa51.48■■■■■ 5.83
MDK-213ENST00000617138 CCDC180Q9P1Z9 1646 aa45.96■■■■■ 4.95
MDK-213ENST00000617138 ABCC9O60706 1549 aa45.52■■■■■ 4.88
MDK-213ENST00000617138 RB1CC1Q8TDY2 1594 aa43.61■■■■■ 4.57
MDK-213ENST00000617138 NACADO15069 1562 aa43.46■■■■■ 4.55
MDK-213ENST00000617138 DCAF8L2P0C7V8 631 aa43.3■■■■■ 4.52
MDK-213ENST00000617138 MYO15BQ96JP2 1530 aa43.08■■■■■ 4.49
MDK-213ENST00000617138 ZCCHC6Q5VYS8 1495 aaKnown RBP42.75■■■■■ 4.43
MDK-213ENST00000617138 DCAF1Q9Y4B6 1507 aa42.65■■■■■ 4.42
MDK-213ENST00000617138 PABPN1Q86U42 306 aaKnown RBP eCLIP42.47■■■■■ 4.39
MDK-213ENST00000617138 UNC13AQ9UPW8 1703 aa42.32■■■■■ 4.37
MDK-213ENST00000617138 DNAJC5BQ9UF47 199 aa42.26■■■■■ 4.36
MDK-213ENST00000617138 BICRAQ9NZM4 1560 aa42.18■■■■■ 4.34
MDK-213ENST00000617138 SHROOM4Q9ULL8 1493 aa41.94■■■■■ 4.3
MDK-213ENST00000617138 SCRIBQ14160 1630 aa41.83■■■■■ 4.29
MDK-213ENST00000617138 EIF4G1Q04637 1599 aaKnown RBP41.18■■■■■ 4.18
MDK-213ENST00000617138 CC2D2AQ9P2K1 1620 aa41.11■■■■■ 4.17
MDK-213ENST00000617138 CECR2Q9BXF3 1484 aa41.02■■■■■ 4.16
MDK-213ENST00000617138 NCAPD3P42695 1498 aa40.13■■■■■ 4.01
MDK-213ENST00000617138 ATAD2BQ9ULI0 1458 aa40.01■■■■■ 4
MDK-213ENST00000617138 SMARCA4P51532 1647 aa40■■■■□ 3.99
MDK-213ENST00000617138 BAZ1AQ9NRL2 1556 aaPredicted RBP39.98■■■■□ 3.99
MDK-213ENST00000617138 SMARCA2P51531 1590 aa39.97■■■■□ 3.99
MDK-213ENST00000617138 HMGXB3Q12766 1538 aa39.83■■■■□ 3.97
MDK-213ENST00000617138 PEG3Q9GZU2 1588 aa39.69■■■■□ 3.94
MDK-213ENST00000617138 BAZ1BQ9UIG0 1483 aaKnown RBP39.67■■■■□ 3.94
MDK-213ENST00000617138 MROH2BQ7Z745 1585 aa39.59■■■■□ 3.93
MDK-213ENST00000617138 ERCC6Q03468 1493 aa39.37■■■■□ 3.89
MDK-213ENST00000617138 CUX2O14529 1486 aa39.18■■■■□ 3.86
MDK-213ENST00000617138 NESP48681 1621 aa39.17■■■■□ 3.86
MDK-213ENST00000617138 LAMC3Q9Y6N6 1575 aa39.11■■■■□ 3.85
MDK-213ENST00000617138 WIZO95785 1651 aa39.06■■■■□ 3.84
MDK-213ENST00000617138 RSF1Q96T23 1441 aaPredicted RBP39.03■■■■□ 3.84
MDK-213ENST00000617138 PDS5BQ9NTI5 1447 aa38.97■■■■□ 3.83
MDK-213ENST00000617138 CADPSQ9ULU8 1353 aa38.95■■■■□ 3.83
MDK-213ENST00000617138 TOP2AP11388 1531 aaKnown RBP38.74■■■■□ 3.79
MDK-213ENST00000617138 THOC2Q8NI27 1593 aaKnown RBP38.69■■■■□ 3.78
MDK-213ENST00000617138 DNAJC5Q9H3Z4 198 aa38.65■■■■□ 3.78
MDK-213ENST00000617138 KIF21AQ7Z4S6 1674 aa38.61■■■■□ 3.77
MDK-213ENST00000617138 CFTRP13569 1480 aa38.56■■■■□ 3.76
MDK-213ENST00000617138 MRC2Q9UBG0 1479 aa38.51■■■■□ 3.76
MDK-213ENST00000617138 CEP164Q9UPV0 1460 aa38.46■■■■□ 3.75
MDK-213ENST00000617138 FANCD2Q9BXW9 1451 aa38.44■■■■□ 3.74
MDK-213ENST00000617138 WDR62O43379 1518 aa38.36■■■■□ 3.73
MDK-213ENST00000617138 CCDC88BA6NC98 1476 aa38.29■■■■□ 3.72
MDK-213ENST00000617138 URB2Q14146 1524 aaKnown RBP38.02■■■■□ 3.68
MDK-213ENST00000617138 PRDM2Q13029 1718 aa38■■■■□ 3.67
MDK-213ENST00000617138 ABCC8Q09428 1581 aa37.84■■■■□ 3.65
MDK-213ENST00000617138 TOPBP1Q92547 1522 aa37.72■■■■□ 3.63
MDK-213ENST00000617138 IFT140Q96RY7 1462 aa37.71■■■■□ 3.63
MDK-213ENST00000617138 DNMBPQ6XZF7 1577 aa37.63■■■■□ 3.62
MDK-213ENST00000617138 SUPT5HO00267 1087 aaKnown RBP37.62■■■■□ 3.61
MDK-213ENST00000617138 OSCARQ8IYS5 282 aa37.53■■■■□ 3.6
MDK-213ENST00000617138 ZNF608Q9ULD9 1512 aaPredicted RBP37.46■■■■□ 3.59
MDK-213ENST00000617138 POLA1P09884 1462 aaPredicted RBP37.38■■■■□ 3.57
MDK-213ENST00000617138 TARBP1Q13395 1621 aaKnown RBP37.29■■■■□ 3.56
MDK-213ENST00000617138 SOGA1O94964 1423 aa37.27■■■■□ 3.56
MDK-213ENST00000617138 EIF4G3O43432 1585 aaKnown RBP37.25■■■■□ 3.55
MDK-213ENST00000617138 AQRO60306 1485 aaKnown RBP eCLIP37.22■■■■□ 3.551e-9■■■■■ 32.7
MDK-213ENST00000617138 CUX1P39880 1505 aa37.19■■■■□ 3.54
MDK-213ENST00000617138 FGD5Q6ZNL6 1462 aa37.19■■■■□ 3.54
MDK-213ENST00000617138 RAD54L2Q9Y4B4 1467 aa37.18■■■■□ 3.54
MDK-213ENST00000617138 WDR97A6NE52 1622 aa37.11■■■■□ 3.53
MDK-213ENST00000617138 TDRD9Q8NDG6 1382 aaKnown RBP37.09■■■■□ 3.53
MDK-213ENST00000617138 TRIM41Q8WV44 630 aa37.07■■■■□ 3.52
MDK-213ENST00000617138 FBLN2P98095 1184 aa36.97■■■■□ 3.51
MDK-213ENST00000617138 GRIN2BQ13224 1484 aa36.92■■■■□ 3.5
MDK-213ENST00000617138 MAGI1Q96QZ7 1491 aaPredicted RBP36.88■■■■□ 3.49
MDK-213ENST00000617138 WRNQ14191 1432 aaPredicted RBP eCLIP36.86■■■■□ 3.49
MDK-213ENST00000617138 SNAPC4Q5SXM2 1469 aa36.86■■■■□ 3.49
MDK-213ENST00000617138 ABCA10Q8WWZ4 1543 aa36.85■■■■□ 3.49
MDK-213ENST00000617138 CHMP7Q8WUX9 453 aaPredicted RBP36.84■■■■□ 3.49
MDK-213ENST00000617138 GAPVD1Q14C86 1478 aa36.82■■■■□ 3.48
MDK-213ENST00000617138 CHD1O14646 1710 aa36.8■■■■□ 3.48
MDK-213ENST00000617138 ARHGEF11O15085 1522 aa36.77■■■■□ 3.48
MDK-213ENST00000617138 RIMBP3CA6NJZ7 1639 aa36.75■■■■□ 3.47
MDK-213ENST00000617138 RIMBP3BA6NNM3 1639 aa36.75■■■■□ 3.47
MDK-213ENST00000617138 TOP2BQ02880 1626 aa36.75■■■■□ 3.47
MDK-213ENST00000617138 RIMBP3Q9UFD9 1639 aa36.75■■■■□ 3.47
MDK-213ENST00000617138 SYNJ2O15056 1496 aa36.73■■■■□ 3.47
MDK-213ENST00000617138 BIVM-ERCC5R4GMW8 1640 aa36.7■■■■□ 3.47
MDK-213ENST00000617138 ABCA5Q8WWZ7 1642 aa36.65■■■■□ 3.46
MDK-213ENST00000617138 SYNJ1O43426 1573 aa36.63■■■■□ 3.45
MDK-213ENST00000617138 PBRM1Q86U86 1689 aa36.58■■■■□ 3.45
MDK-213ENST00000617138 CYB5RLQ6IPT4 315 aa36.53■■■■□ 3.44
MDK-213ENST00000617138 CLASP1Q7Z460 1538 aa36.53■■■■□ 3.44
MDK-213ENST00000617138 ERICH3Q5RHP9 1530 aa36.42■■■■□ 3.42
MDK-213ENST00000617138 FHAD1B1AJZ9 1412 aa36.42■■■■□ 3.42
MDK-213ENST00000617138 ARAP1Q96P48 1450 aa36.41■■■■□ 3.42
MDK-213ENST00000617138 GRIN2AQ12879 1464 aa36.39■■■■□ 3.42
MDK-213ENST00000617138 ADAMTS12P58397 1594 aa36.36■■■■□ 3.41
MDK-213ENST00000617138 NUP160Q12769 1436 aa36.27■■■■□ 3.4
MDK-213ENST00000617138 KIF27Q86VH2 1401 aa36.17■■■■□ 3.38
MDK-213ENST00000617138 CEP170Q5SW79 1584 aa36.14■■■■□ 3.38
MDK-213ENST00000617138 IGF1RP08069 1367 aa36.06■■■■□ 3.36
MDK-213ENST00000617138 TRHP20396 242 aaPredicted RBP36.01■■■■□ 3.36
MDK-213ENST00000617138 SHROOM2Q13796 1616 aa35.97■■■■□ 3.35
MDK-213ENST00000617138 JPH4Q96JJ6 628 aa35.96■■■■□ 3.35
MDK-213ENST00000617138 CUL7Q14999 1698 aa35.92■■■■□ 3.34
MDK-213ENST00000617138 PRG4Q92954 1404 aaPredicted RBP35.89■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms