RNA–Protein interactions for RNA: ENST00000392088.6

TUBA4A-202, Transcript of tubulin alpha 4a, humanhuman

TSL 2 BASIC

Gene TUBA4A, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-202ENST00000392088 NISCHQ9Y2I1 1504 aa39.97■■■■□ 3.99
TUBA4A-202ENST00000392088 SHROOM4Q9ULL8 1493 aa34.44■■■■□ 3.1
TUBA4A-202ENST00000392088 SUPT5HO00267 1087 aaKnown RBP33.9■■■■□ 3.02
TUBA4A-202ENST00000392088 ZCCHC6Q5VYS8 1495 aaKnown RBP33.87■■■■□ 3.01
TUBA4A-202ENST00000392088 CCDC180Q9P1Z9 1646 aa33.77■■■■□ 3
TUBA4A-202ENST00000392088 MYO15BQ96JP2 1530 aa33.17■■■□□ 2.9
TUBA4A-202ENST00000392088 CHIC1Q5VXU3 224 aa33.12■■■□□ 2.89
TUBA4A-202ENST00000392088 DCAF8L2P0C7V8 631 aa33.1■■■□□ 2.89
TUBA4A-202ENST00000392088 DCAF1Q9Y4B6 1507 aa32.71■■■□□ 2.83
TUBA4A-202ENST00000392088 HRCP23327 699 aa32.68■■■□□ 2.82
TUBA4A-202ENST00000392088 PCGF6Q9BYE7 350 aa32.46■■■□□ 2.79
TUBA4A-202ENST00000392088 LOC105371045A0A1W2PR82 267 aa32.22■■■□□ 2.75
TUBA4A-202ENST00000392088 PPARGC1BQ86YN6 1023 aaKnown RBP32.06■■■□□ 2.72
TUBA4A-202ENST00000392088 ABCC9O60706 1549 aa32.04■■■□□ 2.72
TUBA4A-202ENST00000392088 SCRIBQ14160 1630 aa31.82■■■□□ 2.68
TUBA4A-202ENST00000392088 RSF1Q96T23 1441 aaPredicted RBP31.79■■■□□ 2.68
TUBA4A-202ENST00000392088 TRIM26Q12899 539 aaPredicted RBP31.69■■■□□ 2.66
TUBA4A-202ENST00000392088 RB1CC1Q8TDY2 1594 aa31.56■■■□□ 2.64
TUBA4A-202ENST00000392088 TRIM41Q8WV44 630 aa31.49■■■□□ 2.63
TUBA4A-202ENST00000392088 FAM9AQ8IZU1 332 aaPredicted RBP31.34■■■□□ 2.61
TUBA4A-202ENST00000392088 CECR2Q9BXF3 1484 aa31.24■■■□□ 2.59
TUBA4A-202ENST00000392088 MROH2BQ7Z745 1585 aa31.15■■■□□ 2.58
TUBA4A-202ENST00000392088 NACADO15069 1562 aa31.13■■■□□ 2.57
TUBA4A-202ENST00000392088 EHMT2Q96KQ7 1210 aa31.12■■■□□ 2.57
TUBA4A-202ENST00000392088 ZEB1P37275 1124 aaPredicted RBP31.07■■■□□ 2.56
TUBA4A-202ENST00000392088 WIZO95785 1651 aa31.03■■■□□ 2.56
TUBA4A-202ENST00000392088 BAZ1AQ9NRL2 1556 aaPredicted RBP30.79■■■□□ 2.52
TUBA4A-202ENST00000392088 EIF4G1Q04637 1599 aaKnown RBP30.74■■■□□ 2.51
TUBA4A-202ENST00000392088 ABCC8Q09428 1581 aa30.47■■■□□ 2.47
TUBA4A-202ENST00000392088 TOP2AP11388 1531 aaKnown RBP30.45■■■□□ 2.47
TUBA4A-202ENST00000392088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.45■■■□□ 2.46
TUBA4A-202ENST00000392088 CCDC88BA6NC98 1476 aa30.41■■■□□ 2.46
TUBA4A-202ENST00000392088 SMARCA4P51532 1647 aa30.39■■■□□ 2.46
TUBA4A-202ENST00000392088 SCAF1Q9H7N4 1312 aaKnown RBP30.38■■■□□ 2.45
TUBA4A-202ENST00000392088 SMARCA2P51531 1590 aa30.35■■■□□ 2.45
TUBA4A-202ENST00000392088 CCER1Q8TC90 406 aaPredicted RBP30.32■■■□□ 2.44
TUBA4A-202ENST00000392088 UNC13AQ9UPW8 1703 aa30.29■■■□□ 2.44
TUBA4A-202ENST00000392088 WRNQ14191 1432 aaPredicted RBP eCLIP30.24■■■□□ 2.43
TUBA4A-202ENST00000392088 SOGA1O94964 1423 aa30.23■■■□□ 2.43
TUBA4A-202ENST00000392088 CEP162Q5TB80 1403 aa30.21■■■□□ 2.43
TUBA4A-202ENST00000392088 TTBK1Q5TCY1 1321 aaPredicted RBP30.2■■■□□ 2.42
TUBA4A-202ENST00000392088 RUSC2Q8N2Y8 1516 aa30.11■■■□□ 2.41
TUBA4A-202ENST00000392088 TNIKQ9UKE5 1360 aa30.1■■■□□ 2.41
TUBA4A-202ENST00000392088 CSRNP3Q8WYN3 585 aa30.02■■■□□ 2.4
TUBA4A-202ENST00000392088 EEA1Q15075 1411 aa29.98■■■□□ 2.39
TUBA4A-202ENST00000392088 UBTFP17480 764 aaKnown RBP29.95■■■□□ 2.39
TUBA4A-202ENST00000392088 PELP1Q8IZL8 1130 aaKnown RBP29.94■■■□□ 2.38
TUBA4A-202ENST00000392088 ACIN1Q9UKV3 1341 aaKnown RBP29.92■■■□□ 2.38
TUBA4A-202ENST00000392088 DIEXFQ68CQ4 756 aaKnown RBP29.92■■■□□ 2.38
TUBA4A-202ENST00000392088 NEUROD1Q13562 356 aa29.9■■■□□ 2.38
TUBA4A-202ENST00000392088 GOLGA3Q08378 1498 aa29.87■■■□□ 2.37
TUBA4A-202ENST00000392088 PABPN1Q86U42 306 aaKnown RBP eCLIP29.84■■■□□ 2.37
TUBA4A-202ENST00000392088 BICRAQ9NZM4 1560 aa29.83■■■□□ 2.37
TUBA4A-202ENST00000392088 PEG3Q9GZU2 1588 aa29.73■■■□□ 2.35
TUBA4A-202ENST00000392088 SYNJ1O43426 1573 aa29.73■■■□□ 2.35
TUBA4A-202ENST00000392088 CEP164Q9UPV0 1460 aa29.65■■■□□ 2.34
TUBA4A-202ENST00000392088 KIF21BO75037 1637 aa29.64■■■□□ 2.34
TUBA4A-202ENST00000392088 ZNF316A6NFI3 1004 aaPredicted RBP29.61■■■□□ 2.33
TUBA4A-202ENST00000392088 CENPBP07199 599 aaPredicted RBP29.61■■■□□ 2.33
TUBA4A-202ENST00000392088 GTF3C3Q9Y5Q9 886 aa29.61■■■□□ 2.33
TUBA4A-202ENST00000392088 CLIP1P30622 1438 aa29.56■■■□□ 2.32
TUBA4A-202ENST00000392088 HNRNPUL2Q1KMD3 747 aaKnown RBP29.55■■■□□ 2.32
TUBA4A-202ENST00000392088 ATAD2BQ9ULI0 1458 aa29.51■■■□□ 2.31
TUBA4A-202ENST00000392088 VPS8Q8N3P4 1428 aa29.47■■■□□ 2.31
TUBA4A-202ENST00000392088 RAPGEF2Q9Y4G8 1499 aa29.46■■■□□ 2.31
TUBA4A-202ENST00000392088 BAZ1BQ9UIG0 1483 aaKnown RBP29.43■■■□□ 2.3
TUBA4A-202ENST00000392088 RANGAP1P46060 587 aaPredicted RBP29.35■■■□□ 2.29
TUBA4A-202ENST00000392088 APLP2Q06481 763 aa29.29■■■□□ 2.28
TUBA4A-202ENST00000392088 MIER1Q8N108 512 aa29.29■■■□□ 2.28
TUBA4A-202ENST00000392088 YTHDC1Q96MU7 727 aaKnown RBP29.29■■■□□ 2.28
TUBA4A-202ENST00000392088 TOP2BQ02880 1626 aa29.28■■■□□ 2.28
TUBA4A-202ENST00000392088 BIVM-ERCC5R4GMW8 1640 aa29.18■■■□□ 2.26
TUBA4A-202ENST00000392088 ARAP1Q96P48 1450 aa29.09■■■□□ 2.25
TUBA4A-202ENST00000392088 PRXQ9BXM0 1461 aa29.09■■■□□ 2.25
TUBA4A-202ENST00000392088 ERICH3Q5RHP9 1530 aa29.08■■■□□ 2.25
TUBA4A-202ENST00000392088 KANK4Q5T7N3 995 aaPredicted RBP29.01■■■□□ 2.24
TUBA4A-202ENST00000392088 DHX57Q6P158 1386 aaKnown RBP29.01■■■□□ 2.23
TUBA4A-202ENST00000392088 CUX1P39880 1505 aa28.96■■■□□ 2.23
TUBA4A-202ENST00000392088 CLSPNQ9HAW4 1339 aa28.91■■■□□ 2.22
TUBA4A-202ENST00000392088 RRBP1Q9P2E9 1410 aaKnown RBP28.84■■■□□ 2.21
TUBA4A-202ENST00000392088 HMGXB3Q12766 1538 aa28.84■■■□□ 2.21
TUBA4A-202ENST00000392088 KIF27Q86VH2 1401 aa28.84■■■□□ 2.21
TUBA4A-202ENST00000392088 NCAPD3P42695 1498 aa28.83■■■□□ 2.21
TUBA4A-202ENST00000392088 ARHGAP35Q9NRY4 1499 aa28.77■■■□□ 2.2
TUBA4A-202ENST00000392088 CFTRP13569 1480 aa28.72■■■□□ 2.19
TUBA4A-202ENST00000392088 CUX2O14529 1486 aa28.71■■■□□ 2.19
TUBA4A-202ENST00000392088 CCNB3Q8WWL7 1395 aa28.69■■■□□ 2.18
TUBA4A-202ENST00000392088 ITGAEP38570 1179 aa28.64■■■□□ 2.17
TUBA4A-202ENST00000392088 IGF1RP08069 1367 aa28.54■■■□□ 2.16
TUBA4A-202ENST00000392088 PRDM2Q13029 1718 aa28.54■■■□□ 2.16
TUBA4A-202ENST00000392088 RAB3GAP2Q9H2M9 1393 aa28.52■■■□□ 2.16
TUBA4A-202ENST00000392088 TIAM1Q13009 1591 aa28.5■■■□□ 2.15
TUBA4A-202ENST00000392088 MAPKBP1O60336 1514 aa28.49■■■□□ 2.15
TUBA4A-202ENST00000392088 SUPT16HQ9Y5B9 1047 aaKnown RBP28.44■■■□□ 2.14
TUBA4A-202ENST00000392088 MYT1Q01538 1121 aa28.43■■■□□ 2.14
TUBA4A-202ENST00000392088 MAP3K1Q13233 1512 aa28.43■■■□□ 2.14
TUBA4A-202ENST00000392088 CARMIL1Q5VZK9 1371 aa28.41■■■□□ 2.14
TUBA4A-202ENST00000392088 LRRC9Q6ZRR7 1453 aa28.39■■■□□ 2.13
TUBA4A-202ENST00000392088 FGD5Q6ZNL6 1462 aa28.37■■■□□ 2.13
TUBA4A-202ENST00000392088 PHLDB1Q86UU1 1377 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms