RNA–Protein interactions for RNA: ENST00000250535.4

CDO1-201, Transcript of cysteine dioxygenase type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDO1, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDO1-201ENST00000250535 NISCHQ9Y2I1 1504 aa41.71■■■■■ 4.27
CDO1-201ENST00000250535 CCDC180Q9P1Z9 1646 aa35.73■■■■□ 3.31
CDO1-201ENST00000250535 ZCCHC6Q5VYS8 1495 aaKnown RBP35.29■■■■□ 3.24
CDO1-201ENST00000250535 SHROOM4Q9ULL8 1493 aa35.14■■■■□ 3.22
CDO1-201ENST00000250535 SUPT5HO00267 1087 aaKnown RBP34.39■■■■□ 3.1
CDO1-201ENST00000250535 DCAF1Q9Y4B6 1507 aa34.39■■■■□ 3.1
CDO1-201ENST00000250535 DCAF8L2P0C7V8 631 aa34.28■■■■□ 3.08
CDO1-201ENST00000250535 MYO15BQ96JP2 1530 aa33.49■■■□□ 2.95
CDO1-201ENST00000250535 CHIC1Q5VXU3 224 aa33.48■■■□□ 2.95
CDO1-201ENST00000250535 ABCC9O60706 1549 aa33.3■■■□□ 2.92
CDO1-201ENST00000250535 SCRIBQ14160 1630 aa33.21■■■□□ 2.91
CDO1-201ENST00000250535 NACADO15069 1562 aa33.01■■■□□ 2.87
CDO1-201ENST00000250535 RSF1Q96T23 1441 aaPredicted RBP32.87■■■□□ 2.85
CDO1-201ENST00000250535 RB1CC1Q8TDY2 1594 aa32.6■■■□□ 2.81
CDO1-201ENST00000250535 CECR2Q9BXF3 1484 aa32.38■■■□□ 2.77
CDO1-201ENST00000250535 MROH2BQ7Z745 1585 aa32.32■■■□□ 2.77
CDO1-201ENST00000250535 LOC105371045A0A1W2PR82 267 aa32.32■■■□□ 2.76
CDO1-201ENST00000250535 HRCP23327 699 aa32.23■■■□□ 2.75
CDO1-201ENST00000250535 PCGF6Q9BYE7 350 aa32.18■■■□□ 2.74
CDO1-201ENST00000250535 TRIM41Q8WV44 630 aa32.18■■■□□ 2.74
CDO1-201ENST00000250535 WIZO95785 1651 aa32.15■■■□□ 2.74
CDO1-201ENST00000250535 BAZ1AQ9NRL2 1556 aaPredicted RBP32.11■■■□□ 2.73
CDO1-201ENST00000250535 UNC13AQ9UPW8 1703 aa31.87■■■□□ 2.69
CDO1-201ENST00000250535 SMARCA4P51532 1647 aa31.82■■■□□ 2.68
CDO1-201ENST00000250535 TOP2AP11388 1531 aaKnown RBP31.8■■■□□ 2.68
CDO1-201ENST00000250535 TRIM26Q12899 539 aaPredicted RBP31.8■■■□□ 2.68
CDO1-201ENST00000250535 EIF4G1Q04637 1599 aaKnown RBP31.77■■■□□ 2.68
CDO1-201ENST00000250535 FAM9AQ8IZU1 332 aaPredicted RBP31.74■■■□□ 2.67
CDO1-201ENST00000250535 SMARCA2P51531 1590 aa31.55■■■□□ 2.64
CDO1-201ENST00000250535 CCDC88BA6NC98 1476 aa31.53■■■□□ 2.64
CDO1-201ENST00000250535 BICRAQ9NZM4 1560 aa31.47■■■□□ 2.63
CDO1-201ENST00000250535 PPARGC1BQ86YN6 1023 aaKnown RBP31.35■■■□□ 2.61
CDO1-201ENST00000250535 EHMT2Q96KQ7 1210 aa31.34■■■□□ 2.61
CDO1-201ENST00000250535 ABCC8Q09428 1581 aa31.32■■■□□ 2.6
CDO1-201ENST00000250535 PABPN1Q86U42 306 aaKnown RBP eCLIP31.3■■■□□ 2.6
CDO1-201ENST00000250535 PEG3Q9GZU2 1588 aa31.29■■■□□ 2.6
CDO1-201ENST00000250535 ZEB1P37275 1124 aaPredicted RBP31.18■■■□□ 2.58
CDO1-201ENST00000250535 EEA1Q15075 1411 aa31.09■■■□□ 2.57
CDO1-201ENST00000250535 ATAD2BQ9ULI0 1458 aa30.99■■■□□ 2.55
CDO1-201ENST00000250535 SOGA1O94964 1423 aa30.97■■■□□ 2.55
CDO1-201ENST00000250535 BAZ1BQ9UIG0 1483 aaKnown RBP30.93■■■□□ 2.54
CDO1-201ENST00000250535 WRNQ14191 1432 aaPredicted RBP eCLIP30.92■■■□□ 2.54
CDO1-201ENST00000250535 TNIKQ9UKE5 1360 aa30.89■■■□□ 2.54
CDO1-201ENST00000250535 CEP162Q5TB80 1403 aa30.87■■■□□ 2.53
CDO1-201ENST00000250535 CSRNP3Q8WYN3 585 aa30.85■■■□□ 2.53
CDO1-201ENST00000250535 RUSC2Q8N2Y8 1516 aa30.79■■■□□ 2.52
CDO1-201ENST00000250535 GOLGA3Q08378 1498 aa30.78■■■□□ 2.52
CDO1-201ENST00000250535 SYNJ1O43426 1573 aa30.76■■■□□ 2.51
CDO1-201ENST00000250535 UBTFP17480 764 aaKnown RBP30.65■■■□□ 2.5
CDO1-201ENST00000250535 KIF21BO75037 1637 aa30.63■■■□□ 2.49
CDO1-201ENST00000250535 CEP164Q9UPV0 1460 aa30.63■■■□□ 2.49
CDO1-201ENST00000250535 HMGXB3Q12766 1538 aa30.53■■■□□ 2.48
CDO1-201ENST00000250535 TOP2BQ02880 1626 aa30.48■■■□□ 2.47
CDO1-201ENST00000250535 NCAPD3P42695 1498 aa30.46■■■□□ 2.47
CDO1-201ENST00000250535 BIVM-ERCC5R4GMW8 1640 aa30.42■■■□□ 2.46
CDO1-201ENST00000250535 CCER1Q8TC90 406 aaPredicted RBP30.41■■■□□ 2.46
CDO1-201ENST00000250535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.38■■■□□ 2.45
CDO1-201ENST00000250535 TTBK1Q5TCY1 1321 aaPredicted RBP30.35■■■□□ 2.45
CDO1-201ENST00000250535 CLIP1P30622 1438 aa30.35■■■□□ 2.45
CDO1-201ENST00000250535 RAPGEF2Q9Y4G8 1499 aa30.28■■■□□ 2.44
CDO1-201ENST00000250535 VPS8Q8N3P4 1428 aa30.23■■■□□ 2.43
CDO1-201ENST00000250535 ERICH3Q5RHP9 1530 aa30.18■■■□□ 2.42
CDO1-201ENST00000250535 CFTRP13569 1480 aa30.15■■■□□ 2.42
CDO1-201ENST00000250535 CUX1P39880 1505 aa30.14■■■□□ 2.42
CDO1-201ENST00000250535 PRXQ9BXM0 1461 aa30.1■■■□□ 2.41
CDO1-201ENST00000250535 APLP2Q06481 763 aa30.06■■■□□ 2.4
CDO1-201ENST00000250535 PRDM2Q13029 1718 aa30.05■■■□□ 2.4
CDO1-201ENST00000250535 KIF27Q86VH2 1401 aa30.03■■■□□ 2.4
CDO1-201ENST00000250535 RANGAP1P46060 587 aaPredicted RBP29.9■■■□□ 2.38
CDO1-201ENST00000250535 ARAP1Q96P48 1450 aa29.88■■■□□ 2.37
CDO1-201ENST00000250535 CADPSQ9ULU8 1353 aa29.82■■■□□ 2.36
CDO1-201ENST00000250535 HNRNPUL2Q1KMD3 747 aaKnown RBP29.82■■■□□ 2.36
CDO1-201ENST00000250535 DIEXFQ68CQ4 756 aaKnown RBP29.71■■■□□ 2.35
CDO1-201ENST00000250535 CC2D2AQ9P2K1 1620 aa29.71■■■□□ 2.35
CDO1-201ENST00000250535 CUX2O14529 1486 aa29.71■■■□□ 2.35
CDO1-201ENST00000250535 FGD5Q6ZNL6 1462 aa29.64■■■□□ 2.33
CDO1-201ENST00000250535 ARHGAP35Q9NRY4 1499 aa29.62■■■□□ 2.33
CDO1-201ENST00000250535 IGF1RP08069 1367 aa29.61■■■□□ 2.33
CDO1-201ENST00000250535 ZNF316A6NFI3 1004 aaPredicted RBP29.61■■■□□ 2.33
CDO1-201ENST00000250535 FANCD2Q9BXW9 1451 aa29.54■■■□□ 2.32
CDO1-201ENST00000250535 KANK4Q5T7N3 995 aaPredicted RBP29.52■■■□□ 2.32
CDO1-201ENST00000250535 CARMIL1Q5VZK9 1371 aa29.52■■■□□ 2.32
CDO1-201ENST00000250535 RRBP1Q9P2E9 1410 aaKnown RBP29.5■■■□□ 2.31
CDO1-201ENST00000250535 SCAF1Q9H7N4 1312 aaKnown RBP29.48■■■□□ 2.31
CDO1-201ENST00000250535 DNMBPQ6XZF7 1577 aa29.47■■■□□ 2.31
CDO1-201ENST00000250535 CLSPNQ9HAW4 1339 aa29.45■■■□□ 2.3
CDO1-201ENST00000250535 MAP3K1Q13233 1512 aa29.42■■■□□ 2.3
CDO1-201ENST00000250535 ACIN1Q9UKV3 1341 aaKnown RBP29.38■■■□□ 2.29
CDO1-201ENST00000250535 CENPBP07199 599 aaPredicted RBP29.36■■■□□ 2.29
CDO1-201ENST00000250535 CCNB3Q8WWL7 1395 aa29.36■■■□□ 2.29
CDO1-201ENST00000250535 TIAM1Q13009 1591 aa29.36■■■□□ 2.29
CDO1-201ENST00000250535 ABCA10Q8WWZ4 1543 aa29.35■■■□□ 2.29
CDO1-201ENST00000250535 DHX57Q6P158 1386 aaKnown RBP29.35■■■□□ 2.29
CDO1-201ENST00000250535 TOPBP1Q92547 1522 aa29.34■■■□□ 2.29
CDO1-201ENST00000250535 POLA1P09884 1462 aaPredicted RBP29.29■■■□□ 2.28
CDO1-201ENST00000250535 FHAD1B1AJZ9 1412 aa29.29■■■□□ 2.28
CDO1-201ENST00000250535 RAD54L2Q9Y4B4 1467 aa29.27■■■□□ 2.28
CDO1-201ENST00000250535 CUL7Q14999 1698 aa29.26■■■□□ 2.27
CDO1-201ENST00000250535 NEUROD1Q13562 356 aa29.25■■■□□ 2.27
CDO1-201ENST00000250535 NESP48681 1621 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms