Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 TEX10-202ENST00000429235 824 ntTSL 55.47□□□□□ -1.537e-6■□□□□ 9.6
CSTF2P33240 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.657e-6■□□□□ 9.6
CSTF2P33240 UNK-208ENST00000592629 633 ntTSL 317.09■□□□□ 0.332e-7■□□□□ 9.6
CSTF2P33240 UNK-206ENST00000589790 549 ntTSL 316.48■□□□□ 0.232e-7■□□□□ 9.6
CSTF2P33240 UNK-202ENST00000586527 1312 ntTSL 1 (best)14.59□□□□□ -0.072e-7■□□□□ 9.6
CSTF2P33240 UNK-204ENST00000587501 984 ntTSL 1 (best)12.86□□□□□ -0.352e-7■□□□□ 9.6
CSTF2P33240 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.362e-7■□□□□ 9.6
CSTF2P33240 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.287e-7■□□□□ 9.6
CSTF2P33240 LINC01021-202ENST00000505775 946 ntTSL 1 (best) BASIC10.99□□□□□ -0.651e-7■□□□□ 9.6
CSTF2P33240 LINC01021-203ENST00000510165 1106 ntTSL 1 (best) BASIC10.67□□□□□ -0.71e-7■□□□□ 9.6
CSTF2P33240 LINC01021-206ENST00000514844 667 ntTSL 1 (best)4.6□□□□□ -1.671e-7■□□□□ 9.6
CSTF2P33240 LINC01021-201ENST00000503107 458 ntTSL 1 (best)4.27□□□□□ -1.731e-7■□□□□ 9.6
CSTF2P33240 SCAMP4-204ENST00000414057 1477 ntTSL 1 (best)16.57■□□□□ 0.246e-8■□□□□ 9.6
CSTF2P33240 SCAMP4-203ENST00000411971 783 ntTSL 516.3■□□□□ 0.26e-8■□□□□ 9.6
CSTF2P33240 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.26e-8■□□□□ 9.6
CSTF2P33240 SCAMP4-211ENST00000588907 547 ntTSL 416.27■□□□□ 0.26e-8■□□□□ 9.6
CSTF2P33240 SCAMP4-205ENST00000452128 718 ntTSL 215.69■□□□□ 0.16e-8■□□□□ 9.6
CSTF2P33240 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.11□□□□□ -0.156e-8■□□□□ 9.6
CSTF2P33240 SCAMP4-212ENST00000590266 570 ntTSL 513.73□□□□□ -0.216e-8■□□□□ 9.6
CSTF2P33240 SCAMP4-206ENST00000460767 569 ntTSL 413.47□□□□□ -0.256e-8■□□□□ 9.6
CSTF2P33240 NCL-201ENST00000322723 4034 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.616e-8■□□□□ 9.6
CSTF2P33240 SCAMP4-208ENST00000489554 573 ntTSL 310.34□□□□□ -0.756e-8■□□□□ 9.6
CSTF2P33240 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.511e-6■□□□□ 9.5
CSTF2P33240 FDPS-212ENST00000487002 2017 ntTSL 215.94■□□□□ 0.147e-6■□□□□ 9.5
CSTF2P33240 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.067e-6■□□□□ 9.5
CSTF2P33240 FDPS-208ENST00000470171 746 ntTSL 215.18■□□□□ 0.027e-6■□□□□ 9.5
CSTF2P33240 FDPS-205ENST00000465559 677 ntTSL 315.03■□□□□ -07e-6■□□□□ 9.5
CSTF2P33240 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.027e-6■□□□□ 9.5
CSTF2P33240 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.067e-6■□□□□ 9.5
CSTF2P33240 FDPS-210ENST00000474345 713 ntTSL 314.67□□□□□ -0.067e-6■□□□□ 9.5
CSTF2P33240 FDPS-213ENST00000489003 976 ntTSL 214.67□□□□□ -0.067e-6■□□□□ 9.5
CSTF2P33240 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.067e-6■□□□□ 9.5
CSTF2P33240 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.087e-6■□□□□ 9.5
CSTF2P33240 FDPS-216ENST00000491013 912 ntTSL 514.36□□□□□ -0.117e-6■□□□□ 9.5
CSTF2P33240 FDPS-219ENST00000495308 808 ntTSL 213.18□□□□□ -0.37e-6■□□□□ 9.5
CSTF2P33240 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.64□□□□□ -0.397e-6■□□□□ 9.5
CSTF2P33240 FDPS-207ENST00000468479 938 ntTSL 212.6□□□□□ -0.397e-6■□□□□ 9.5
CSTF2P33240 FDPS-204ENST00000461507 1022 ntTSL 212.45□□□□□ -0.427e-6■□□□□ 9.5
CSTF2P33240 FDPS-211ENST00000477057 741 ntTSL 212.37□□□□□ -0.437e-6■□□□□ 9.5
CSTF2P33240 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC12.33□□□□□ -0.447e-6■□□□□ 9.5
CSTF2P33240 AL109613.1-203ENST00000417401 504 ntTSL 312.23□□□□□ -0.457e-6■□□□□ 9.5
CSTF2P33240 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC11.73□□□□□ -0.537e-6■□□□□ 9.5
CSTF2P33240 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.557e-6■□□□□ 9.5
CSTF2P33240 DUXAP8-202ENST00000413768 2102 ntTSL 2 BASIC11.33□□□□□ -0.63e-8■□□□□ 9.5
CSTF2P33240 DUXAP8-201ENST00000383038 1394 ntTSL 210.38□□□□□ -0.753e-8■□□□□ 9.5
CSTF2P33240 ZCCHC11-211ENST00000474453 1010 ntTSL 58.72□□□□□ -1.013e-8■□□□□ 9.5
CSTF2P33240 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.033e-8■□□□□ 9.5
CSTF2P33240 SH3YL1-217ENST00000472012 863 ntTSL 38.54□□□□□ -1.047e-6■□□□□ 9.5
CSTF2P33240 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC8□□□□□ -1.133e-8■□□□□ 9.5
CSTF2P33240 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC7.99□□□□□ -1.133e-8■□□□□ 9.5
CSTF2P33240 FDPS-209ENST00000471117 630 ntTSL 37.83□□□□□ -1.167e-6■□□□□ 9.5
CSTF2P33240 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC7.82□□□□□ -1.167e-6■□□□□ 9.5
CSTF2P33240 SH3YL1-223ENST00000481932 885 ntTSL 37.8□□□□□ -1.167e-6■□□□□ 9.5
CSTF2P33240 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.11□□□□□ -1.273e-8■□□□□ 9.5
CSTF2P33240 ZCCHC11-206ENST00000469810 3757 ntTSL 25.8□□□□□ -1.483e-8■□□□□ 9.5
CSTF2P33240 ZCCHC11-221ENST00000531722 1016 ntTSL 34.95□□□□□ -1.623e-8■□□□□ 9.5
CSTF2P33240 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.717e-6■□□□□ 9.5
CSTF2P33240 ENO1-206ENST00000497492 647 ntTSL 212.11□□□□□ -0.473e-8■□□□□ 9.5
CSTF2P33240 ENO1-202ENST00000464920 2266 ntTSL 1 (best)12.11□□□□□ -0.473e-8■□□□□ 9.5
CSTF2P33240 ENO1-201ENST00000234590 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.53e-8■□□□□ 9.5
CSTF2P33240 ENO1-203ENST00000486051 536 ntTSL 36.23□□□□□ -1.413e-8■□□□□ 9.5
CSTF2P33240 IER3-202ENST00000376377 1350 ntBASIC18.19■□□□□ 0.52e-9■□□□□ 9.4
CSTF2P33240 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.152e-9■□□□□ 9.4
CSTF2P33240 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.422e-6■□□□□ 9.4
CSTF2P33240 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.93□□□□□ -0.343e-8■□□□□ 9.4
CSTF2P33240 USO1-204ENST00000514213 4034 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.723e-8■□□□□ 9.4
CSTF2P33240 PAPOLA-212ENST00000555131 546 ntTSL 33.59□□□□□ -1.833e-8■□□□□ 9.4
CSTF2P33240 VGLL4-206ENST00000418000 792 ntTSL 324.94■■□□□ 1.588e-8■□□□□ 9.4
CSTF2P33240 VGLL4-205ENST00000417466 894 ntTSL 322.23■■□□□ 1.158e-8■□□□□ 9.4
CSTF2P33240 VGLL4-204ENST00000417206 581 ntTSL 417.27■□□□□ 0.368e-8■□□□□ 9.4
CSTF2P33240 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.26■□□□□ 0.358e-8■□□□□ 9.4
CSTF2P33240 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.238e-8■□□□□ 9.4
CSTF2P33240 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.28■□□□□ 0.048e-8■□□□□ 9.4
CSTF2P33240 VGLL4-212ENST00000437722 544 ntTSL 315.26■□□□□ 0.038e-8■□□□□ 9.4
CSTF2P33240 VGLL4-209ENST00000424709 437 ntTSL 314.55□□□□□ -0.088e-8■□□□□ 9.4
CSTF2P33240 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.55□□□□□ -0.088e-8■□□□□ 9.4
CSTF2P33240 VGLL4-207ENST00000419541 466 ntTSL 313.71□□□□□ -0.218e-8■□□□□ 9.4
CSTF2P33240 VGLL4-215ENST00000458499 766 ntTSL 313.71□□□□□ -0.218e-8■□□□□ 9.4
CSTF2P33240 VGLL4-201ENST00000273038 3725 ntTSL 1 (best) BASIC11.25□□□□□ -0.618e-8■□□□□ 9.4
CSTF2P33240 VGLL4-213ENST00000445411 726 ntTSL 59.27□□□□□ -0.938e-8■□□□□ 9.4
CSTF2P33240 USP31-201ENST00000219689 10699 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.664e-8■□□□□ 9.3
CSTF2P33240 RPL13A-209ENST00000479992 850 ntTSL 315.54■□□□□ 0.082e-13■□□□□ 9.3
CSTF2P33240 C2orf42-212ENST00000470096 579 ntTSL 416.21■□□□□ 0.191e-9■□□□□ 9.3
CSTF2P33240 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.92■□□□□ 0.141e-9■□□□□ 9.3
CSTF2P33240 TIA1-210ENST00000474809 915 ntTSL 512.88□□□□□ -0.351e-9■□□□□ 9.3
CSTF2P33240 TIA1-203ENST00000415783 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.681e-9■□□□□ 9.3
CSTF2P33240 TIA1-205ENST00000433529 4647 ntTSL 2 BASIC10.52□□□□□ -0.731e-9■□□□□ 9.3
CSTF2P33240 TIA1-204ENST00000416149 821 ntTSL 1 (best) BASIC9□□□□□ -0.971e-9■□□□□ 9.3
CSTF2P33240 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.24□□□□□ -1.251e-9■□□□□ 9.3
CSTF2P33240 TIA1-218ENST00000496096 511 ntTSL 36.82□□□□□ -1.321e-9■□□□□ 9.3
CSTF2P33240 TIA1-209ENST00000474699 686 ntTSL 24.67□□□□□ -1.661e-9■□□□□ 9.3
CSTF2P33240 TIA1-207ENST00000454815 911 ntTSL 53.95□□□□□ -1.781e-9■□□□□ 9.3
CSTF2P33240 TIA1-212ENST00000477415 510 ntTSL 22.97□□□□□ -1.931e-9■□□□□ 9.3
CSTF2P33240 TIA1-214ENST00000482876 562 ntTSL 52.97□□□□□ -1.931e-9■□□□□ 9.3
CSTF2P33240 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.7■□□□□ 0.584e-8■□□□□ 9.3
CSTF2P33240 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.514e-8■□□□□ 9.3
CSTF2P33240 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.26■□□□□ 0.514e-8■□□□□ 9.3
CSTF2P33240 KANSL1-223ENST00000639150 1815 ntTSL 515.33■□□□□ 0.044e-8■□□□□ 9.3
CSTF2P33240 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.084e-8■□□□□ 9.3
CSTF2P33240 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.57□□□□□ -0.084e-8■□□□□ 9.3
Retrieved 100 of 6,735 protein–RNA pairs in 29.8 ms