RNA–Protein interactions for RNA: ENST00000264904.8

USO1-201, Transcript of USO1 vesicle transport factor, humanhuman

TSL 2 BASIC

Gene USO1, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USO1-201ENST00000264904 NISCHQ9Y2I1 1504 aa24.77■■□□□ 1.56
USO1-201ENST00000264904 DCAF8L2P0C7V8 631 aa22.71■■□□□ 1.23
USO1-201ENST00000264904 SUPT5HO00267 1087 aaKnown RBP22.37■■□□□ 1.17
USO1-201ENST00000264904 SHROOM4Q9ULL8 1493 aa22.27■■□□□ 1.16
USO1-201ENST00000264904 PCGF6Q9BYE7 350 aa21.73■■□□□ 1.07
USO1-201ENST00000264904 EHMT2Q96KQ7 1210 aa21.45■■□□□ 1.02
USO1-201ENST00000264904 PPARGC1BQ86YN6 1023 aaKnown RBP21.28■■□□□ 1
USO1-201ENST00000264904 HRCP23327 699 aa21.24■□□□□ 0.99
USO1-201ENST00000264904 FAM9AQ8IZU1 332 aaPredicted RBP20.99■□□□□ 0.95
USO1-201ENST00000264904 LOC105371045A0A1W2PR82 267 aa20.87■□□□□ 0.93
USO1-201ENST00000264904 CHIC1Q5VXU3 224 aa20.82■□□□□ 0.92
USO1-201ENST00000264904 TTBK1Q5TCY1 1321 aaPredicted RBP20.78■□□□□ 0.92
USO1-201ENST00000264904 PELP1Q8IZL8 1130 aaKnown RBP20.76■□□□□ 0.91
USO1-201ENST00000264904 ZCCHC6Q5VYS8 1495 aaKnown RBP20.73■□□□□ 0.91
USO1-201ENST00000264904 CCDC180Q9P1Z9 1646 aa20.66■□□□□ 0.9
USO1-201ENST00000264904 ABCC9O60706 1549 aa20.55■□□□□ 0.88
USO1-201ENST00000264904 TRIM26Q12899 539 aaPredicted RBP20.54■□□□□ 0.88
USO1-201ENST00000264904 CENPBP07199 599 aaPredicted RBP20.48■□□□□ 0.87
USO1-201ENST00000264904 ZEB1P37275 1124 aaPredicted RBP20.46■□□□□ 0.87
USO1-201ENST00000264904 CCER1Q8TC90 406 aaPredicted RBP20.44■□□□□ 0.86
USO1-201ENST00000264904 TRIM41Q8WV44 630 aa20.42■□□□□ 0.86
USO1-201ENST00000264904 YTHDC1Q96MU7 727 aaKnown RBP20.37■□□□□ 0.85
USO1-201ENST00000264904 MYT1Q01538 1121 aa20.27■□□□□ 0.84
USO1-201ENST00000264904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.16■□□□□ 0.82
USO1-201ENST00000264904 ERICH6Q7L0X2 663 aa20.13■□□□□ 0.81
USO1-201ENST00000264904 MYO15BQ96JP2 1530 aa20.13■□□□□ 0.81
USO1-201ENST00000264904 SCRIBQ14160 1630 aa20.11■□□□□ 0.81
USO1-201ENST00000264904 APLP2Q06481 763 aa20.07■□□□□ 0.8
USO1-201ENST00000264904 RANGAP1P46060 587 aaPredicted RBP20.03■□□□□ 0.8
USO1-201ENST00000264904 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
USO1-201ENST00000264904 SCAF1Q9H7N4 1312 aaKnown RBP20■□□□□ 0.79
USO1-201ENST00000264904 GTF3C3Q9Y5Q9 886 aa20■□□□□ 0.79
USO1-201ENST00000264904 DIEXFQ68CQ4 756 aaKnown RBP19.91■□□□□ 0.78
USO1-201ENST00000264904 DCAF1Q9Y4B6 1507 aa19.88■□□□□ 0.77
USO1-201ENST00000264904 UBTFP17480 764 aaKnown RBP19.81■□□□□ 0.76
USO1-201ENST00000264904 ACIN1Q9UKV3 1341 aaKnown RBP19.79■□□□□ 0.76
USO1-201ENST00000264904 NEUROD1Q13562 356 aa19.76■□□□□ 0.75
USO1-201ENST00000264904 NEFLP07196 543 aa19.72■□□□□ 0.75
USO1-201ENST00000264904 RSF1Q96T23 1441 aaPredicted RBP19.71■□□□□ 0.75
USO1-201ENST00000264904 HNRNPUL2Q1KMD3 747 aaKnown RBP19.71■□□□□ 0.75
USO1-201ENST00000264904 NACADO15069 1562 aa19.6■□□□□ 0.73
USO1-201ENST00000264904 CECR2Q9BXF3 1484 aa19.52■□□□□ 0.72
USO1-201ENST00000264904 RB1CC1Q8TDY2 1594 aa19.52■□□□□ 0.72
USO1-201ENST00000264904 ITGAEP38570 1179 aa19.39■□□□□ 0.69
USO1-201ENST00000264904 BCANQ96GW7 911 aa19.37■□□□□ 0.69
USO1-201ENST00000264904 ZNF316A6NFI3 1004 aaPredicted RBP19.36■□□□□ 0.69
USO1-201ENST00000264904 ATP1B4Q9UN42 357 aaPredicted RBP19.36■□□□□ 0.69
USO1-201ENST00000264904 MROH2BQ7Z745 1585 aa19.3■□□□□ 0.68
USO1-201ENST00000264904 CSRNP3Q8WYN3 585 aa19.22■□□□□ 0.67
USO1-201ENST00000264904 MIER1Q8N108 512 aa19.2■□□□□ 0.66
USO1-201ENST00000264904 BAZ1AQ9NRL2 1556 aaPredicted RBP19.18■□□□□ 0.66
USO1-201ENST00000264904 CNGB1Q14028 1251 aaPredicted RBP19.15■□□□□ 0.66
USO1-201ENST00000264904 WIZO95785 1651 aa19.09■□□□□ 0.65
USO1-201ENST00000264904 DAXXQ9UER7 740 aaPredicted RBP18.99■□□□□ 0.63
USO1-201ENST00000264904 POLR3GLQ9BT43 218 aa18.99■□□□□ 0.63
USO1-201ENST00000264904 RTL5Q5HYW3 569 aaPredicted RBP18.97■□□□□ 0.63
USO1-201ENST00000264904 CCDC88BA6NC98 1476 aa18.95■□□□□ 0.62
USO1-201ENST00000264904 BAZ1BQ9UIG0 1483 aaKnown RBP18.92■□□□□ 0.62
USO1-201ENST00000264904 ABCC8Q09428 1581 aa18.89■□□□□ 0.61
USO1-201ENST00000264904 WRNQ14191 1432 aaPredicted RBP eCLIP18.88■□□□□ 0.61
USO1-201ENST00000264904 FKBP8Q14318 412 aa18.85■□□□□ 0.61
USO1-201ENST00000264904 SOGA1O94964 1423 aa18.84■□□□□ 0.61
USO1-201ENST00000264904 TOP2AP11388 1531 aaKnown RBP18.81■□□□□ 0.6
USO1-201ENST00000264904 SMARCA4P51532 1647 aa18.8■□□□□ 0.6
USO1-201ENST00000264904 CEP162Q5TB80 1403 aa18.79■□□□□ 0.6
USO1-201ENST00000264904 P3H3Q8IVL6 736 aa18.75■□□□□ 0.59
USO1-201ENST00000264904 FAM50AQ14320 339 aaKnown RBP18.72■□□□□ 0.59
USO1-201ENST00000264904 EEA1Q15075 1411 aa18.72■□□□□ 0.59
USO1-201ENST00000264904 TRIM52Q96A61 297 aa18.72■□□□□ 0.59
USO1-201ENST00000264904 DDX10Q13206 875 aaKnown RBP18.72■□□□□ 0.59
USO1-201ENST00000264904 HIRIP3Q9BW71 556 aaPredicted RBP18.71■□□□□ 0.59
USO1-201ENST00000264904 GOLGA3Q08378 1498 aa18.69■□□□□ 0.58
USO1-201ENST00000264904 TNIKQ9UKE5 1360 aa18.68■□□□□ 0.58
USO1-201ENST00000264904 CDK11AQ9UQ88 783 aaPredicted RBP18.68■□□□□ 0.58
USO1-201ENST00000264904 CLIP1P30622 1438 aa18.68■□□□□ 0.58
USO1-201ENST00000264904 SUPT16HQ9Y5B9 1047 aaKnown RBP18.67■□□□□ 0.58
USO1-201ENST00000264904 ATAD2BQ9ULI0 1458 aa18.63■□□□□ 0.57
USO1-201ENST00000264904 IRX6P78412 446 aaPredicted RBP18.62■□□□□ 0.57
USO1-201ENST00000264904 ANP32EQ9BTT0 268 aa18.6■□□□□ 0.57
USO1-201ENST00000264904 ANP32CO43423 234 aa18.6■□□□□ 0.57
USO1-201ENST00000264904 SMARCA2P51531 1590 aa18.6■□□□□ 0.57
USO1-201ENST00000264904 CLSPNQ9HAW4 1339 aa18.59■□□□□ 0.57
USO1-201ENST00000264904 EIF5BO60841 1220 aaKnown RBP18.58■□□□□ 0.57
USO1-201ENST00000264904 RUSC2Q8N2Y8 1516 aa18.58■□□□□ 0.56
USO1-201ENST00000264904 CEP164Q9UPV0 1460 aa18.57■□□□□ 0.56
USO1-201ENST00000264904 BCL11AQ9H165 835 aa18.49■□□□□ 0.55
USO1-201ENST00000264904 KIF27Q86VH2 1401 aa18.47■□□□□ 0.55
USO1-201ENST00000264904 ARID3CA6NKF2 412 aa18.45■□□□□ 0.54
USO1-201ENST00000264904 HNRNPUQ00839 825 aaKnown RBP eCLIP18.45■□□□□ 0.54
USO1-201ENST00000264904 TSHZ2Q9NRE2 1034 aa18.45■□□□□ 0.54
USO1-201ENST00000264904 NPM2Q86SE8 214 aaKnown RBP18.41■□□□□ 0.54
USO1-201ENST00000264904 KCNH8Q96L42 1107 aa18.41■□□□□ 0.54
USO1-201ENST00000264904 NBR1Q14596 966 aa18.4■□□□□ 0.54
USO1-201ENST00000264904 FBLN2P98095 1184 aa18.39■□□□□ 0.53
USO1-201ENST00000264904 BICRAQ9NZM4 1560 aa18.38■□□□□ 0.53
USO1-201ENST00000264904 SENP3-EIF4A1A0A087X0R7 540 aa18.36■□□□□ 0.53
USO1-201ENST00000264904 CUX2O14529 1486 aa18.33■□□□□ 0.53
USO1-201ENST00000264904 ANP32AP39687 249 aaKnown RBP18.33■□□□□ 0.52
USO1-201ENST00000264904 RAPGEF2Q9Y4G8 1499 aa18.32■□□□□ 0.52
USO1-201ENST00000264904 FAM9BQ8IZU0 186 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms