RNA–Protein interactions for RNA: ENST00000259874.5

IER3-201, Transcript of immediate early response 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IER3, Length 1,244 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IER3-201ENST00000259874 NISCHQ9Y2I1 1504 aa35.02■■■■□ 3.2
IER3-201ENST00000259874 ABCC9O60706 1549 aa32.1■■■□□ 2.73
IER3-201ENST00000259874 CCDC180Q9P1Z9 1646 aa31.6■■■□□ 2.65
IER3-201ENST00000259874 DNAJC5BQ9UF47 199 aa30.48■■■□□ 2.47
IER3-201ENST00000259874 RB1CC1Q8TDY2 1594 aa30.32■■■□□ 2.44
IER3-201ENST00000259874 NACADO15069 1562 aa29.93■■■□□ 2.38
IER3-201ENST00000259874 UNC13AQ9UPW8 1703 aa29.76■■■□□ 2.36
IER3-201ENST00000259874 PABPN1Q86U42 306 aaKnown RBP eCLIP29.73■■■□□ 2.352e-8■□□□□ 10.1
IER3-201ENST00000259874 DCAF8L2P0C7V8 631 aa29.65■■■□□ 2.34
IER3-201ENST00000259874 BICRAQ9NZM4 1560 aa29.43■■■□□ 2.3
IER3-201ENST00000259874 MYO15BQ96JP2 1530 aa29.26■■■□□ 2.27
IER3-201ENST00000259874 ZCCHC6Q5VYS8 1495 aaKnown RBP29.23■■■□□ 2.27
IER3-201ENST00000259874 DCAF1Q9Y4B6 1507 aa29.1■■■□□ 2.25
IER3-201ENST00000259874 CC2D2AQ9P2K1 1620 aa28.99■■■□□ 2.23
IER3-201ENST00000259874 CECR2Q9BXF3 1484 aa28.95■■■□□ 2.22
IER3-201ENST00000259874 SHROOM4Q9ULL8 1493 aa28.93■■■□□ 2.22
IER3-201ENST00000259874 SCRIBQ14160 1630 aa28.8■■■□□ 2.2
IER3-201ENST00000259874 EIF4G1Q04637 1599 aaKnown RBP28.78■■■□□ 2.2
IER3-201ENST00000259874 DNAJC5Q9H3Z4 198 aa28.39■■■□□ 2.14
IER3-201ENST00000259874 CUX2O14529 1486 aa27.85■■■□□ 2.05
IER3-201ENST00000259874 ERCC6Q03468 1493 aa27.77■■■□□ 2.04
IER3-201ENST00000259874 NCAPD3P42695 1498 aa27.57■■■□□ 2
IER3-201ENST00000259874 ATAD2BQ9ULI0 1458 aa27.44■■□□□ 1.98
IER3-201ENST00000259874 NESP48681 1621 aa27.41■■□□□ 1.98
IER3-201ENST00000259874 HMGXB3Q12766 1538 aa27.4■■□□□ 1.98
IER3-201ENST00000259874 SMARCA2P51531 1590 aa27.38■■□□□ 1.97
IER3-201ENST00000259874 SMARCA4P51532 1647 aa27.36■■□□□ 1.97
IER3-201ENST00000259874 THOC2Q8NI27 1593 aaKnown RBP27.3■■□□□ 1.96
IER3-201ENST00000259874 BAZ1BQ9UIG0 1483 aaKnown RBP27.2■■□□□ 1.95
IER3-201ENST00000259874 BAZ1AQ9NRL2 1556 aaPredicted RBP27.19■■□□□ 1.94
IER3-201ENST00000259874 KIF21AQ7Z4S6 1674 aa27.16■■□□□ 1.94
IER3-201ENST00000259874 LAMC3Q9Y6N6 1575 aa27.14■■□□□ 1.93
IER3-201ENST00000259874 PEG3Q9GZU2 1588 aa27.04■■□□□ 1.92
IER3-201ENST00000259874 TRIM41Q8WV44 630 aa27.03■■□□□ 1.92
IER3-201ENST00000259874 PDS5BQ9NTI5 1447 aa26.93■■□□□ 1.9
IER3-201ENST00000259874 MROH2BQ7Z745 1585 aa26.92■■□□□ 1.9
IER3-201ENST00000259874 MRC2Q9UBG0 1479 aa26.78■■□□□ 1.88
IER3-201ENST00000259874 WDR62O43379 1518 aa26.75■■□□□ 1.87
IER3-201ENST00000259874 CADPSQ9ULU8 1353 aa26.71■■□□□ 1.87
IER3-201ENST00000259874 RSF1Q96T23 1441 aaPredicted RBP26.69■■□□□ 1.86
IER3-201ENST00000259874 WIZO95785 1651 aa26.6■■□□□ 1.85
IER3-201ENST00000259874 CEP164Q9UPV0 1460 aa26.58■■□□□ 1.85
IER3-201ENST00000259874 FANCD2Q9BXW9 1451 aa26.48■■□□□ 1.83
IER3-201ENST00000259874 TOP2AP11388 1531 aaKnown RBP26.44■■□□□ 1.82
IER3-201ENST00000259874 OSCARQ8IYS5 282 aa26.42■■□□□ 1.82
IER3-201ENST00000259874 CFTRP13569 1480 aa26.3■■□□□ 1.8
IER3-201ENST00000259874 RIMBP3CA6NJZ7 1639 aa26.3■■□□□ 1.8
IER3-201ENST00000259874 RIMBP3BA6NNM3 1639 aa26.3■■□□□ 1.8
IER3-201ENST00000259874 RIMBP3Q9UFD9 1639 aa26.3■■□□□ 1.8
IER3-201ENST00000259874 URB2Q14146 1524 aaKnown RBP26.29■■□□□ 1.8
IER3-201ENST00000259874 PRDM2Q13029 1718 aa26.22■■□□□ 1.79
IER3-201ENST00000259874 ARHGEF11O15085 1522 aa26.11■■□□□ 1.77
IER3-201ENST00000259874 ZNF608Q9ULD9 1512 aaPredicted RBP26.07■■□□□ 1.76
IER3-201ENST00000259874 CCDC88BA6NC98 1476 aa26.06■■□□□ 1.76
IER3-201ENST00000259874 IFT140Q96RY7 1462 aa26.03■■□□□ 1.76
IER3-201ENST00000259874 EIF4G3O43432 1585 aaKnown RBP25.98■■□□□ 1.75
IER3-201ENST00000259874 CHD1O14646 1710 aa25.95■■□□□ 1.74
IER3-201ENST00000259874 SUPT5HO00267 1087 aaKnown RBP25.95■■□□□ 1.74
IER3-201ENST00000259874 TOPBP1Q92547 1522 aa25.92■■□□□ 1.74
IER3-201ENST00000259874 CYB5RLQ6IPT4 315 aa25.88■■□□□ 1.73
IER3-201ENST00000259874 TRHP20396 242 aaPredicted RBP25.82■■□□□ 1.72
IER3-201ENST00000259874 DNMBPQ6XZF7 1577 aa25.81■■□□□ 1.72
IER3-201ENST00000259874 ARAP1Q96P48 1450 aa25.8■■□□□ 1.72
IER3-201ENST00000259874 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
IER3-201ENST00000259874 TARBP1Q13395 1621 aaKnown RBP25.75■■□□□ 1.71
IER3-201ENST00000259874 AQRO60306 1485 aaKnown RBP eCLIP25.73■■□□□ 1.712e-11■■■■■ 28.9
IER3-201ENST00000259874 FBLN2P98095 1184 aa25.7■■□□□ 1.7
IER3-201ENST00000259874 POLA1P09884 1462 aaPredicted RBP25.61■■□□□ 1.69
IER3-201ENST00000259874 RAD54L2Q9Y4B4 1467 aa25.53■■□□□ 1.68
IER3-201ENST00000259874 CLASP1Q7Z460 1538 aa25.52■■□□□ 1.68
IER3-201ENST00000259874 SNAPC4Q5SXM2 1469 aa25.51■■□□□ 1.67
IER3-201ENST00000259874 AEBP2Q6ZN18 517 aaPredicted RBP25.49■■□□□ 1.67
IER3-201ENST00000259874 SYNJ1O43426 1573 aa25.48■■□□□ 1.67
IER3-201ENST00000259874 TDRD9Q8NDG6 1382 aaKnown RBP25.48■■□□□ 1.67
IER3-201ENST00000259874 SOGA1O94964 1423 aa25.45■■□□□ 1.66
IER3-201ENST00000259874 WDR97A6NE52 1622 aa25.45■■□□□ 1.66
IER3-201ENST00000259874 FGD5Q6ZNL6 1462 aa25.39■■□□□ 1.65
IER3-201ENST00000259874 CHMP7Q8WUX9 453 aaPredicted RBP25.38■■□□□ 1.65
IER3-201ENST00000259874 MAGI1Q96QZ7 1491 aaPredicted RBP25.38■■□□□ 1.65
IER3-201ENST00000259874 PBRM1Q86U86 1689 aa25.34■■□□□ 1.65
IER3-201ENST00000259874 GRIN2BQ13224 1484 aa25.31■■□□□ 1.64
IER3-201ENST00000259874 SYNJ2O15056 1496 aa25.3■■□□□ 1.64
IER3-201ENST00000259874 CUX1P39880 1505 aa25.27■■□□□ 1.64
IER3-201ENST00000259874 GAPVD1Q14C86 1478 aa25.27■■□□□ 1.64
IER3-201ENST00000259874 WRNQ14191 1432 aaPredicted RBP eCLIP25.2■■□□□ 1.62
IER3-201ENST00000259874 TOP2BQ02880 1626 aa25.13■■□□□ 1.61
IER3-201ENST00000259874 ABCA5Q8WWZ7 1642 aa25.12■■□□□ 1.61
IER3-201ENST00000259874 BIVM-ERCC5R4GMW8 1640 aa25.12■■□□□ 1.61
IER3-201ENST00000259874 ERCC6L2Q5T890 1561 aa25.1■■□□□ 1.61
IER3-201ENST00000259874 ABCA10Q8WWZ4 1543 aa25.03■■□□□ 1.6
IER3-201ENST00000259874 GRIN2AQ12879 1464 aa25.01■■□□□ 1.59
IER3-201ENST00000259874 CEP170Q5SW79 1584 aa25.01■■□□□ 1.59
IER3-201ENST00000259874 KIF13AQ9H1H9 1805 aa25■■□□□ 1.59
IER3-201ENST00000259874 ADAMTS12P58397 1594 aa24.99■■□□□ 1.59
IER3-201ENST00000259874 SHROOM2Q13796 1616 aa24.94■■□□□ 1.58
IER3-201ENST00000259874 NUP160Q12769 1436 aa24.91■■□□□ 1.58
IER3-201ENST00000259874 FHAD1B1AJZ9 1412 aa24.79■■□□□ 1.56
IER3-201ENST00000259874 ERICH3Q5RHP9 1530 aa24.74■■□□□ 1.55
IER3-201ENST00000259874 PRG4Q92954 1404 aaPredicted RBP24.73■■□□□ 1.55
IER3-201ENST00000259874 KIF27Q86VH2 1401 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms